RNA–Protein interactions for RNA: ENST00000575033.1

EDC4-209, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 3

Gene EDC4, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-209ENST00000575033 NISCHQ9Y2I1 1504 aa31.95■■■□□ 2.71
EDC4-209ENST00000575033 CCDC180Q9P1Z9 1646 aa28.69■■■□□ 2.18
EDC4-209ENST00000575033 ABCC9O60706 1549 aa28.53■■■□□ 2.16
EDC4-209ENST00000575033 RB1CC1Q8TDY2 1594 aa27.23■■□□□ 1.95
EDC4-209ENST00000575033 NACADO15069 1562 aa27.07■■□□□ 1.92
EDC4-209ENST00000575033 DCAF8L2P0C7V8 631 aa26.78■■□□□ 1.88
EDC4-209ENST00000575033 MYO15BQ96JP2 1530 aa26.75■■□□□ 1.87
EDC4-209ENST00000575033 DNAJC5BQ9UF47 199 aa26.61■■□□□ 1.85
EDC4-209ENST00000575033 UNC13AQ9UPW8 1703 aa26.61■■□□□ 1.85
EDC4-209ENST00000575033 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
EDC4-209ENST00000575033 PABPN1Q86U42 306 aaKnown RBP eCLIP26.51■■□□□ 1.839e-10■■□□□ 14.1
EDC4-209ENST00000575033 BICRAQ9NZM4 1560 aa26.44■■□□□ 1.82
EDC4-209ENST00000575033 DCAF1Q9Y4B6 1507 aa26.44■■□□□ 1.82
EDC4-209ENST00000575033 SHROOM4Q9ULL8 1493 aa26.16■■□□□ 1.78
EDC4-209ENST00000575033 SCRIBQ14160 1630 aa26.12■■□□□ 1.77
EDC4-209ENST00000575033 CC2D2AQ9P2K1 1620 aa25.8■■□□□ 1.72
EDC4-209ENST00000575033 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
EDC4-209ENST00000575033 CECR2Q9BXF3 1484 aa25.71■■□□□ 1.71
EDC4-209ENST00000575033 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
EDC4-209ENST00000575033 SMARCA4P51532 1647 aa24.93■■□□□ 1.58
EDC4-209ENST00000575033 ATAD2BQ9ULI0 1458 aa24.9■■□□□ 1.58
EDC4-209ENST00000575033 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
EDC4-209ENST00000575033 HMGXB3Q12766 1538 aa24.85■■□□□ 1.57
EDC4-209ENST00000575033 BAZ1AQ9NRL2 1556 aaPredicted RBP24.82■■□□□ 1.56
EDC4-209ENST00000575033 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
EDC4-209ENST00000575033 BAZ1BQ9UIG0 1483 aaKnown RBP24.69■■□□□ 1.54
EDC4-209ENST00000575033 ERCC6Q03468 1493 aa24.64■■□□□ 1.54
EDC4-209ENST00000575033 MROH2BQ7Z745 1585 aa24.62■■□□□ 1.53
EDC4-209ENST00000575033 CUX2O14529 1486 aa24.59■■□□□ 1.53
EDC4-209ENST00000575033 NESP48681 1621 aa24.53■■□□□ 1.52
EDC4-209ENST00000575033 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
EDC4-209ENST00000575033 DNAJC5Q9H3Z4 198 aa24.38■■□□□ 1.49
EDC4-209ENST00000575033 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.49
EDC4-209ENST00000575033 WIZO95785 1651 aa24.32■■□□□ 1.48
EDC4-209ENST00000575033 KIF21AQ7Z4S6 1674 aa24.25■■□□□ 1.47
EDC4-209ENST00000575033 PDS5BQ9NTI5 1447 aa24.24■■□□□ 1.47
EDC4-209ENST00000575033 CADPSQ9ULU8 1353 aa24.19■■□□□ 1.46
EDC4-209ENST00000575033 RSF1Q96T23 1441 aaPredicted RBP24.13■■□□□ 1.45
EDC4-209ENST00000575033 TOP2AP11388 1531 aaKnown RBP24.07■■□□□ 1.44
EDC4-209ENST00000575033 MRC2Q9UBG0 1479 aa24.06■■□□□ 1.44
EDC4-209ENST00000575033 WDR62O43379 1518 aa24.02■■□□□ 1.44
EDC4-209ENST00000575033 CEP164Q9UPV0 1460 aa23.98■■□□□ 1.43
EDC4-209ENST00000575033 CFTRP13569 1480 aa23.97■■□□□ 1.43
EDC4-209ENST00000575033 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
EDC4-209ENST00000575033 PRDM2Q13029 1718 aa23.77■■□□□ 1.4
EDC4-209ENST00000575033 URB2Q14146 1524 aaKnown RBP23.75■■□□□ 1.39
EDC4-209ENST00000575033 CCDC88BA6NC98 1476 aa23.73■■□□□ 1.39
EDC4-209ENST00000575033 TOPBP1Q92547 1522 aa23.5■■□□□ 1.35
EDC4-209ENST00000575033 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
EDC4-209ENST00000575033 DNMBPQ6XZF7 1577 aa23.45■■□□□ 1.34
EDC4-209ENST00000575033 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
EDC4-209ENST00000575033 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
EDC4-209ENST00000575033 OSCARQ8IYS5 282 aa23.38■■□□□ 1.33
EDC4-209ENST00000575033 EIF4G3O43432 1585 aaKnown RBP23.36■■□□□ 1.33
EDC4-209ENST00000575033 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
EDC4-209ENST00000575033 TARBP1Q13395 1621 aaKnown RBP23.3■■□□□ 1.32
EDC4-209ENST00000575033 POLA1P09884 1462 aaPredicted RBP23.28■■□□□ 1.32
EDC4-209ENST00000575033 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.34e-7■■■■□ 21.7
EDC4-209ENST00000575033 RAD54L2Q9Y4B4 1467 aa23.16■■□□□ 1.3
EDC4-209ENST00000575033 RIMBP3CA6NJZ7 1639 aa23.15■■□□□ 1.3
EDC4-209ENST00000575033 RIMBP3BA6NNM3 1639 aa23.15■■□□□ 1.3
EDC4-209ENST00000575033 RIMBP3Q9UFD9 1639 aa23.15■■□□□ 1.3
EDC4-209ENST00000575033 CUX1P39880 1505 aa23.14■■□□□ 1.3
EDC4-209ENST00000575033 FGD5Q6ZNL6 1462 aa23.14■■□□□ 1.29
EDC4-209ENST00000575033 CHD1O14646 1710 aa23.13■■□□□ 1.29
EDC4-209ENST00000575033 SOGA1O94964 1423 aa23.12■■□□□ 1.29
EDC4-209ENST00000575033 WDR97A6NE52 1622 aa23.11■■□□□ 1.29
EDC4-209ENST00000575033 ARHGEF11O15085 1522 aa23.11■■□□□ 1.29
EDC4-209ENST00000575033 TDRD9Q8NDG6 1382 aaKnown RBP23.06■■□□□ 1.28
EDC4-209ENST00000575033 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
EDC4-209ENST00000575033 SNAPC4Q5SXM2 1469 aa23.02■■□□□ 1.28
EDC4-209ENST00000575033 FBLN2P98095 1184 aa22.97■■□□□ 1.27
EDC4-209ENST00000575033 MAGI1Q96QZ7 1491 aaPredicted RBP22.97■■□□□ 1.27
EDC4-209ENST00000575033 GRIN2BQ13224 1484 aa22.95■■□□□ 1.26
EDC4-209ENST00000575033 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
EDC4-209ENST00000575033 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
EDC4-209ENST00000575033 ABCA10Q8WWZ4 1543 aa22.89■■□□□ 1.26
EDC4-209ENST00000575033 ARAP1Q96P48 1450 aa22.89■■□□□ 1.25
EDC4-209ENST00000575033 SYNJ2O15056 1496 aa22.88■■□□□ 1.25
EDC4-209ENST00000575033 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
EDC4-209ENST00000575033 GAPVD1Q14C86 1478 aa22.87■■□□□ 1.25
EDC4-209ENST00000575033 SYNJ1O43426 1573 aa22.87■■□□□ 1.25
EDC4-209ENST00000575033 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.25
EDC4-209ENST00000575033 CYB5RLQ6IPT4 315 aa22.82■■□□□ 1.24
EDC4-209ENST00000575033 BIVM-ERCC5R4GMW8 1640 aa22.81■■□□□ 1.24
EDC4-209ENST00000575033 TOP2BQ02880 1626 aa22.8■■□□□ 1.24
EDC4-209ENST00000575033 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
EDC4-209ENST00000575033 ADAMTS12P58397 1594 aa22.72■■□□□ 1.23
EDC4-209ENST00000575033 GRIN2AQ12879 1464 aa22.67■■□□□ 1.22
EDC4-209ENST00000575033 ERICH3Q5RHP9 1530 aa22.61■■□□□ 1.21
EDC4-209ENST00000575033 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
EDC4-209ENST00000575033 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
EDC4-209ENST00000575033 NUP160Q12769 1436 aa22.59■■□□□ 1.21
EDC4-209ENST00000575033 TRHP20396 242 aaPredicted RBP22.54■■□□□ 1.2
EDC4-209ENST00000575033 ERCC6L2Q5T890 1561 aa22.51■■□□□ 1.19
EDC4-209ENST00000575033 SHROOM2Q13796 1616 aa22.5■■□□□ 1.19
EDC4-209ENST00000575033 RUSC2Q8N2Y8 1516 aa22.4■■□□□ 1.18
EDC4-209ENST00000575033 KIF27Q86VH2 1401 aa22.33■■□□□ 1.17
EDC4-209ENST00000575033 PRG4Q92954 1404 aaPredicted RBP22.33■■□□□ 1.17
EDC4-209ENST00000575033 CUL7Q14999 1698 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms