RNA–Protein interactions for RNA: ENST00000574909.1

RNF213-219, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-219ENST00000574909 NISCHQ9Y2I1 1504 aa18.71■□□□□ 0.59
RNF213-219ENST00000574909 ABCC9O60706 1549 aa17.17■□□□□ 0.34
RNF213-219ENST00000574909 CCDC180Q9P1Z9 1646 aa16.92■□□□□ 0.3
RNF213-219ENST00000574909 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
RNF213-219ENST00000574909 RB1CC1Q8TDY2 1594 aa16.29■□□□□ 0.2
RNF213-219ENST00000574909 NACADO15069 1562 aa16.12■□□□□ 0.17
RNF213-219ENST00000574909 PABPN1Q86U42 306 aaKnown RBP eCLIP15.95■□□□□ 0.14
RNF213-219ENST00000574909 DCAF8L2P0C7V8 631 aa15.93■□□□□ 0.14
RNF213-219ENST00000574909 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
RNF213-219ENST00000574909 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
RNF213-219ENST00000574909 BICRAQ9NZM4 1560 aa15.73■□□□□ 0.11
RNF213-219ENST00000574909 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
RNF213-219ENST00000574909 CECR2Q9BXF3 1484 aa15.55■□□□□ 0.08
RNF213-219ENST00000574909 DCAF1Q9Y4B6 1507 aa15.5■□□□□ 0.07
RNF213-219ENST00000574909 CC2D2AQ9P2K1 1620 aa15.5■□□□□ 0.07
RNF213-219ENST00000574909 ZCCHC6Q5VYS8 1495 aaKnown RBP15.43■□□□□ 0.06
RNF213-219ENST00000574909 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
RNF213-219ENST00000574909 DNAJC5Q9H3Z4 198 aa15.36■□□□□ 0.05
RNF213-219ENST00000574909 SCRIBQ14160 1630 aa15.32■□□□□ 0.04
RNF213-219ENST00000574909 CUX2O14529 1486 aa15.02■□□□□ -0
RNF213-219ENST00000574909 ERCC6Q03468 1493 aa14.92□□□□□ -0.02
RNF213-219ENST00000574909 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
RNF213-219ENST00000574909 ATAD2BQ9ULI0 1458 aa14.76□□□□□ -0.05
RNF213-219ENST00000574909 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
RNF213-219ENST00000574909 HMGXB3Q12766 1538 aa14.72□□□□□ -0.05
RNF213-219ENST00000574909 NESP48681 1621 aa14.63□□□□□ -0.07
RNF213-219ENST00000574909 SMARCA4P51532 1647 aa14.63□□□□□ -0.07
RNF213-219ENST00000574909 BAZ1BQ9UIG0 1483 aaKnown RBP14.61□□□□□ -0.07
RNF213-219ENST00000574909 LAMC3Q9Y6N6 1575 aa14.58□□□□□ -0.08
RNF213-219ENST00000574909 BAZ1AQ9NRL2 1556 aaPredicted RBP14.57□□□□□ -0.08
RNF213-219ENST00000574909 THOC2Q8NI27 1593 aaKnown RBP14.56□□□□□ -0.08
RNF213-219ENST00000574909 PDS5BQ9NTI5 1447 aa14.56□□□□□ -0.08
RNF213-219ENST00000574909 PEG3Q9GZU2 1588 aa14.54□□□□□ -0.08
RNF213-219ENST00000574909 TRIM41Q8WV44 630 aa14.5□□□□□ -0.09
RNF213-219ENST00000574909 CADPSQ9ULU8 1353 aa14.42□□□□□ -0.1
RNF213-219ENST00000574909 KIF21AQ7Z4S6 1674 aa14.41□□□□□ -0.1
RNF213-219ENST00000574909 MRC2Q9UBG0 1479 aa14.39□□□□□ -0.11
RNF213-219ENST00000574909 MROH2BQ7Z745 1585 aa14.36□□□□□ -0.11
RNF213-219ENST00000574909 WDR62O43379 1518 aa14.36□□□□□ -0.11
RNF213-219ENST00000574909 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
RNF213-219ENST00000574909 CEP164Q9UPV0 1460 aa14.28□□□□□ -0.12
RNF213-219ENST00000574909 FANCD2Q9BXW9 1451 aa14.22□□□□□ -0.13
RNF213-219ENST00000574909 CFTRP13569 1480 aa14.18□□□□□ -0.14
RNF213-219ENST00000574909 WIZO95785 1651 aa14.14□□□□□ -0.15
RNF213-219ENST00000574909 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
RNF213-219ENST00000574909 IFT140Q96RY7 1462 aa14.03□□□□□ -0.16
RNF213-219ENST00000574909 RIMBP3CA6NJZ7 1639 aa14.03□□□□□ -0.16
RNF213-219ENST00000574909 RIMBP3BA6NNM3 1639 aa14.03□□□□□ -0.16
RNF213-219ENST00000574909 RIMBP3Q9UFD9 1639 aa14.03□□□□□ -0.16
RNF213-219ENST00000574909 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
RNF213-219ENST00000574909 ARHGEF11O15085 1522 aa14□□□□□ -0.17
RNF213-219ENST00000574909 RSF1Q96T23 1441 aaPredicted RBP13.99□□□□□ -0.17
RNF213-219ENST00000574909 ABCC8Q09428 1581 aa13.96□□□□□ -0.18
RNF213-219ENST00000574909 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
RNF213-219ENST00000574909 CYB5RLQ6IPT4 315 aa13.94□□□□□ -0.18
RNF213-219ENST00000574909 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
RNF213-219ENST00000574909 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
RNF213-219ENST00000574909 TOPBP1Q92547 1522 aa13.9□□□□□ -0.19
RNF213-219ENST00000574909 EIF4G3O43432 1585 aaKnown RBP13.86□□□□□ -0.19
RNF213-219ENST00000574909 CCDC88BA6NC98 1476 aa13.85□□□□□ -0.19
RNF213-219ENST00000574909 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.2
RNF213-219ENST00000574909 FBLN2P98095 1184 aa13.82□□□□□ -0.2
RNF213-219ENST00000574909 ARAP1Q96P48 1450 aa13.81□□□□□ -0.2
RNF213-219ENST00000574909 AQRO60306 1485 aaKnown RBP eCLIP13.8□□□□□ -0.24e-8■■■■■ 29.1
RNF213-219ENST00000574909 TARBP1Q13395 1621 aaKnown RBP13.77□□□□□ -0.21
RNF213-219ENST00000574909 AEBP2Q6ZN18 517 aaPredicted RBP13.77□□□□□ -0.21
RNF213-219ENST00000574909 CHD1O14646 1710 aa13.76□□□□□ -0.21
RNF213-219ENST00000574909 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
RNF213-219ENST00000574909 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
RNF213-219ENST00000574909 CHMP7Q8WUX9 453 aaPredicted RBP13.71□□□□□ -0.21
RNF213-219ENST00000574909 SOGA1O94964 1423 aa13.71□□□□□ -0.22
RNF213-219ENST00000574909 TDRD9Q8NDG6 1382 aaKnown RBP13.69□□□□□ -0.22
RNF213-219ENST00000574909 SYNJ1O43426 1573 aa13.68□□□□□ -0.22
RNF213-219ENST00000574909 MAGI1Q96QZ7 1491 aaPredicted RBP13.67□□□□□ -0.22
RNF213-219ENST00000574909 CLASP1Q7Z460 1538 aa13.67□□□□□ -0.22
RNF213-219ENST00000574909 SNAPC4Q5SXM2 1469 aa13.66□□□□□ -0.22
RNF213-219ENST00000574909 RAD54L2Q9Y4B4 1467 aa13.66□□□□□ -0.22
RNF213-219ENST00000574909 GRIN2BQ13224 1484 aa13.63□□□□□ -0.23
RNF213-219ENST00000574909 SYNJ2O15056 1496 aa13.62□□□□□ -0.23
RNF213-219ENST00000574909 FGD5Q6ZNL6 1462 aa13.6□□□□□ -0.23
RNF213-219ENST00000574909 GAPVD1Q14C86 1478 aa13.58□□□□□ -0.24
RNF213-219ENST00000574909 CUX1P39880 1505 aa13.51□□□□□ -0.25
RNF213-219ENST00000574909 ABCA10Q8WWZ4 1543 aa13.46□□□□□ -0.25
RNF213-219ENST00000574909 PBRM1Q86U86 1689 aa13.45□□□□□ -0.26
RNF213-219ENST00000574909 GRIN2AQ12879 1464 aa13.43□□□□□ -0.26
RNF213-219ENST00000574909 ABCA5Q8WWZ7 1642 aa13.42□□□□□ -0.26
RNF213-219ENST00000574909 NUP160Q12769 1436 aa13.4□□□□□ -0.26
RNF213-219ENST00000574909 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
RNF213-219ENST00000574909 CEP170Q5SW79 1584 aa13.38□□□□□ -0.27
RNF213-219ENST00000574909 FHAD1B1AJZ9 1412 aa13.37□□□□□ -0.27
RNF213-219ENST00000574909 ERCC6L2Q5T890 1561 aa13.36□□□□□ -0.27
RNF213-219ENST00000574909 ADAMTS12P58397 1594 aa13.34□□□□□ -0.27
RNF213-219ENST00000574909 SHROOM2Q13796 1616 aa13.34□□□□□ -0.27
RNF213-219ENST00000574909 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
RNF213-219ENST00000574909 ERICH3Q5RHP9 1530 aa13.3□□□□□ -0.28
RNF213-219ENST00000574909 JPH4Q96JJ6 628 aa13.3□□□□□ -0.28
RNF213-219ENST00000574909 PRG4Q92954 1404 aaPredicted RBP13.3□□□□□ -0.28
RNF213-219ENST00000574909 FAM69CQ0P6D2 419 aa13.29□□□□□ -0.28
RNF213-219ENST00000574909 ABCC10Q5T3U5 1492 aa13.28□□□□□ -0.28
RNF213-219ENST00000574909 KIF13AQ9H1H9 1805 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms