RNA–Protein interactions for RNA: ENST00000574639.1

TFAP4-204, Transcript of transcription factor AP-4, humanhuman

TSL 5

Gene TFAP4, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-204ENST00000574639 NISCHQ9Y2I1 1504 aa28.38■■■□□ 2.13
TFAP4-204ENST00000574639 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
TFAP4-204ENST00000574639 ABCC9O60706 1549 aa25.13■■□□□ 1.61
TFAP4-204ENST00000574639 RB1CC1Q8TDY2 1594 aa24.03■■□□□ 1.44
TFAP4-204ENST00000574639 NACADO15069 1562 aa23.95■■□□□ 1.43
TFAP4-204ENST00000574639 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
TFAP4-204ENST00000574639 UNC13AQ9UPW8 1703 aa23.68■■□□□ 1.38
TFAP4-204ENST00000574639 DCAF8L2P0C7V8 631 aa23.64■■□□□ 1.37
TFAP4-204ENST00000574639 DNAJC5BQ9UF47 199 aa23.59■■□□□ 1.37
TFAP4-204ENST00000574639 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
TFAP4-204ENST00000574639 DCAF1Q9Y4B6 1507 aa23.49■■□□□ 1.35
TFAP4-204ENST00000574639 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
TFAP4-204ENST00000574639 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
TFAP4-204ENST00000574639 SHROOM4Q9ULL8 1493 aa23.06■■□□□ 1.28
TFAP4-204ENST00000574639 SCRIBQ14160 1630 aa23.06■■□□□ 1.28
TFAP4-204ENST00000574639 CC2D2AQ9P2K1 1620 aa22.8■■□□□ 1.24
TFAP4-204ENST00000574639 EIF4G1Q04637 1599 aaKnown RBP22.79■■□□□ 1.24
TFAP4-204ENST00000574639 CECR2Q9BXF3 1484 aa22.64■■□□□ 1.21
TFAP4-204ENST00000574639 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
TFAP4-204ENST00000574639 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
TFAP4-204ENST00000574639 ATAD2BQ9ULI0 1458 aa22.07■■□□□ 1.12
TFAP4-204ENST00000574639 SMARCA2P51531 1590 aa21.97■■□□□ 1.11
TFAP4-204ENST00000574639 HMGXB3Q12766 1538 aa21.96■■□□□ 1.11
TFAP4-204ENST00000574639 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
TFAP4-204ENST00000574639 PEG3Q9GZU2 1588 aa21.95■■□□□ 1.1
TFAP4-204ENST00000574639 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
TFAP4-204ENST00000574639 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.08
TFAP4-204ENST00000574639 NESP48681 1621 aa21.71■■□□□ 1.07
TFAP4-204ENST00000574639 WIZO95785 1651 aa21.63■■□□□ 1.05
TFAP4-204ENST00000574639 CUX2O14529 1486 aa21.63■■□□□ 1.05
TFAP4-204ENST00000574639 ERCC6Q03468 1493 aa21.59■■□□□ 1.05
TFAP4-204ENST00000574639 LAMC3Q9Y6N6 1575 aa21.57■■□□□ 1.04
TFAP4-204ENST00000574639 THOC2Q8NI27 1593 aaKnown RBP21.49■■□□□ 1.03
TFAP4-204ENST00000574639 DNAJC5Q9H3Z4 198 aa21.48■■□□□ 1.03
TFAP4-204ENST00000574639 KIF21AQ7Z4S6 1674 aa21.47■■□□□ 1.03
TFAP4-204ENST00000574639 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
TFAP4-204ENST00000574639 CADPSQ9ULU8 1353 aa21.42■■□□□ 1.02
TFAP4-204ENST00000574639 PDS5BQ9NTI5 1447 aa21.37■■□□□ 1.01
TFAP4-204ENST00000574639 TOP2AP11388 1531 aaKnown RBP21.31■■□□□ 1
TFAP4-204ENST00000574639 CFTRP13569 1480 aa21.25■□□□□ 0.99
TFAP4-204ENST00000574639 WDR62O43379 1518 aa21.21■□□□□ 0.99
TFAP4-204ENST00000574639 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
TFAP4-204ENST00000574639 FANCD2Q9BXW9 1451 aa21.14■□□□□ 0.98
TFAP4-204ENST00000574639 CEP164Q9UPV0 1460 aa21.12■□□□□ 0.97
TFAP4-204ENST00000574639 PRDM2Q13029 1718 aa21.12■□□□□ 0.97
TFAP4-204ENST00000574639 CCDC88BA6NC98 1476 aa21.09■□□□□ 0.97
TFAP4-204ENST00000574639 URB2Q14146 1524 aaKnown RBP21.03■□□□□ 0.96
TFAP4-204ENST00000574639 TOPBP1Q92547 1522 aa20.8■□□□□ 0.92
TFAP4-204ENST00000574639 ABCC8Q09428 1581 aa20.73■□□□□ 0.91
TFAP4-204ENST00000574639 DNMBPQ6XZF7 1577 aa20.73■□□□□ 0.91
TFAP4-204ENST00000574639 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
TFAP4-204ENST00000574639 IFT140Q96RY7 1462 aa20.72■□□□□ 0.91
TFAP4-204ENST00000574639 TARBP1Q13395 1621 aaKnown RBP20.68■□□□□ 0.9
TFAP4-204ENST00000574639 OSCARQ8IYS5 282 aa20.63■□□□□ 0.89
TFAP4-204ENST00000574639 EIF4G3O43432 1585 aaKnown RBP20.6■□□□□ 0.89
TFAP4-204ENST00000574639 POLA1P09884 1462 aaPredicted RBP20.6■□□□□ 0.89
TFAP4-204ENST00000574639 CUX1P39880 1505 aa20.53■□□□□ 0.88
TFAP4-204ENST00000574639 AQRO60306 1485 aaKnown RBP eCLIP20.53■□□□□ 0.883e-6■■■■□ 19.6
TFAP4-204ENST00000574639 RAD54L2Q9Y4B4 1467 aa20.51■□□□□ 0.87
TFAP4-204ENST00000574639 FGD5Q6ZNL6 1462 aa20.47■□□□□ 0.87
TFAP4-204ENST00000574639 CHD1O14646 1710 aa20.47■□□□□ 0.87
TFAP4-204ENST00000574639 SOGA1O94964 1423 aa20.46■□□□□ 0.87
TFAP4-204ENST00000574639 SUPT5HO00267 1087 aaKnown RBP20.45■□□□□ 0.86
TFAP4-204ENST00000574639 WDR97A6NE52 1622 aa20.43■□□□□ 0.86
TFAP4-204ENST00000574639 RIMBP3CA6NJZ7 1639 aa20.42■□□□□ 0.86
TFAP4-204ENST00000574639 RIMBP3BA6NNM3 1639 aa20.42■□□□□ 0.86
TFAP4-204ENST00000574639 RIMBP3Q9UFD9 1639 aa20.42■□□□□ 0.86
TFAP4-204ENST00000574639 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
TFAP4-204ENST00000574639 TDRD9Q8NDG6 1382 aaKnown RBP20.4■□□□□ 0.86
TFAP4-204ENST00000574639 ARHGEF11O15085 1522 aa20.34■□□□□ 0.85
TFAP4-204ENST00000574639 SNAPC4Q5SXM2 1469 aa20.29■□□□□ 0.84
TFAP4-204ENST00000574639 ABCA10Q8WWZ4 1543 aa20.28■□□□□ 0.84
TFAP4-204ENST00000574639 BIVM-ERCC5R4GMW8 1640 aa20.27■□□□□ 0.84
TFAP4-204ENST00000574639 PBRM1Q86U86 1689 aa20.27■□□□□ 0.84
TFAP4-204ENST00000574639 ABCA5Q8WWZ7 1642 aa20.27■□□□□ 0.83
TFAP4-204ENST00000574639 GRIN2BQ13224 1484 aa20.26■□□□□ 0.83
TFAP4-204ENST00000574639 MAGI1Q96QZ7 1491 aaPredicted RBP20.26■□□□□ 0.83
TFAP4-204ENST00000574639 TOP2BQ02880 1626 aa20.25■□□□□ 0.83
TFAP4-204ENST00000574639 CLASP1Q7Z460 1538 aa20.24■□□□□ 0.83
TFAP4-204ENST00000574639 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
TFAP4-204ENST00000574639 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
TFAP4-204ENST00000574639 SYNJ2O15056 1496 aa20.2■□□□□ 0.82
TFAP4-204ENST00000574639 FBLN2P98095 1184 aa20.2■□□□□ 0.82
TFAP4-204ENST00000574639 WRNQ14191 1432 aaPredicted RBP eCLIP20.17■□□□□ 0.82
TFAP4-204ENST00000574639 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
TFAP4-204ENST00000574639 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
TFAP4-204ENST00000574639 CYB5RLQ6IPT4 315 aa20.11■□□□□ 0.81
TFAP4-204ENST00000574639 ADAMTS12P58397 1594 aa20.05■□□□□ 0.8
TFAP4-204ENST00000574639 GRIN2AQ12879 1464 aa20.03■□□□□ 0.8
TFAP4-204ENST00000574639 ERICH3Q5RHP9 1530 aa20.02■□□□□ 0.79
TFAP4-204ENST00000574639 NUP160Q12769 1436 aa20■□□□□ 0.79
TFAP4-204ENST00000574639 CEP170Q5SW79 1584 aa20■□□□□ 0.79
TFAP4-204ENST00000574639 FHAD1B1AJZ9 1412 aa19.97■□□□□ 0.79
TFAP4-204ENST00000574639 SHROOM2Q13796 1616 aa19.95■□□□□ 0.78
TFAP4-204ENST00000574639 ERCC6L2Q5T890 1561 aa19.94■□□□□ 0.78
TFAP4-204ENST00000574639 IGF1RP08069 1367 aa19.83■□□□□ 0.76
TFAP4-204ENST00000574639 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.76
TFAP4-204ENST00000574639 CUL7Q14999 1698 aa19.75■□□□□ 0.75
TFAP4-204ENST00000574639 JPH4Q96JJ6 628 aa19.74■□□□□ 0.75
TFAP4-204ENST00000574639 KIF27Q86VH2 1401 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms