RNA–Protein interactions for RNA: ENST00000574266.1

ABR-227, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-227ENST00000574266 NISCHQ9Y2I1 1504 aa42.71■■■■■ 4.43
ABR-227ENST00000574266 CCDC180Q9P1Z9 1646 aa38.21■■■■□ 3.71
ABR-227ENST00000574266 ABCC9O60706 1549 aa38.13■■■■□ 3.69
ABR-227ENST00000574266 RB1CC1Q8TDY2 1594 aa36.4■■■■□ 3.42
ABR-227ENST00000574266 DCAF8L2P0C7V8 631 aa36.34■■■■□ 3.41
ABR-227ENST00000574266 NACADO15069 1562 aa36.18■■■■□ 3.38
ABR-227ENST00000574266 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
ABR-227ENST00000574266 PABPN1Q86U42 306 aaKnown RBP eCLIP35.62■■■■□ 3.29
ABR-227ENST00000574266 DNAJC5BQ9UF47 199 aa35.55■■■■□ 3.28
ABR-227ENST00000574266 ZCCHC6Q5VYS8 1495 aaKnown RBP35.37■■■■□ 3.25
ABR-227ENST00000574266 UNC13AQ9UPW8 1703 aa35.35■■■■□ 3.25
ABR-227ENST00000574266 DCAF1Q9Y4B6 1507 aa35.27■■■■□ 3.24
ABR-227ENST00000574266 BICRAQ9NZM4 1560 aa35.13■■■■□ 3.21
ABR-227ENST00000574266 SCRIBQ14160 1630 aa34.86■■■■□ 3.17
ABR-227ENST00000574266 SHROOM4Q9ULL8 1493 aa34.84■■■■□ 3.17
ABR-227ENST00000574266 CC2D2AQ9P2K1 1620 aa34.41■■■■□ 3.1
ABR-227ENST00000574266 EIF4G1Q04637 1599 aaKnown RBP34.36■■■■□ 3.09
ABR-227ENST00000574266 CECR2Q9BXF3 1484 aa34.36■■■■□ 3.09
ABR-227ENST00000574266 NCAPD3P42695 1498 aa33.37■■■□□ 2.93
ABR-227ENST00000574266 ATAD2BQ9ULI0 1458 aa33.29■■■□□ 2.92
ABR-227ENST00000574266 SMARCA2P51531 1590 aa33.26■■■□□ 2.92
ABR-227ENST00000574266 SMARCA4P51532 1647 aa33.24■■■□□ 2.91
ABR-227ENST00000574266 BAZ1AQ9NRL2 1556 aaPredicted RBP33.19■■■□□ 2.9
ABR-227ENST00000574266 HMGXB3Q12766 1538 aa33.1■■■□□ 2.89
ABR-227ENST00000574266 ERCC6Q03468 1493 aa33.05■■■□□ 2.88
ABR-227ENST00000574266 BAZ1BQ9UIG0 1483 aaKnown RBP33.05■■■□□ 2.88
ABR-227ENST00000574266 PEG3Q9GZU2 1588 aa32.88■■■□□ 2.85
ABR-227ENST00000574266 MROH2BQ7Z745 1585 aa32.86■■■□□ 2.85
ABR-227ENST00000574266 CUX2O14529 1486 aa32.83■■■□□ 2.85
ABR-227ENST00000574266 NESP48681 1621 aa32.73■■■□□ 2.83
ABR-227ENST00000574266 DNAJC5Q9H3Z4 198 aa32.67■■■□□ 2.82
ABR-227ENST00000574266 LAMC3Q9Y6N6 1575 aa32.61■■■□□ 2.81
ABR-227ENST00000574266 PDS5BQ9NTI5 1447 aa32.55■■■□□ 2.8
ABR-227ENST00000574266 WIZO95785 1651 aa32.48■■■□□ 2.79
ABR-227ENST00000574266 CADPSQ9ULU8 1353 aa32.45■■■□□ 2.78
ABR-227ENST00000574266 RSF1Q96T23 1441 aaPredicted RBP32.3■■■□□ 2.76
ABR-227ENST00000574266 THOC2Q8NI27 1593 aaKnown RBP32.29■■■□□ 2.76
ABR-227ENST00000574266 KIF21AQ7Z4S6 1674 aa32.28■■■□□ 2.76
ABR-227ENST00000574266 MRC2Q9UBG0 1479 aa32.14■■■□□ 2.74
ABR-227ENST00000574266 TOP2AP11388 1531 aaKnown RBP32.12■■■□□ 2.73
ABR-227ENST00000574266 CEP164Q9UPV0 1460 aa32.08■■■□□ 2.73
ABR-227ENST00000574266 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
ABR-227ENST00000574266 CFTRP13569 1480 aa32.03■■■□□ 2.72
ABR-227ENST00000574266 WDR62O43379 1518 aa31.97■■■□□ 2.71
ABR-227ENST00000574266 CCDC88BA6NC98 1476 aa31.79■■■□□ 2.68
ABR-227ENST00000574266 URB2Q14146 1524 aaKnown RBP31.66■■■□□ 2.66
ABR-227ENST00000574266 PRDM2Q13029 1718 aa31.63■■■□□ 2.65
ABR-227ENST00000574266 OSCARQ8IYS5 282 aa31.54■■■□□ 2.64
ABR-227ENST00000574266 ABCC8Q09428 1581 aa31.51■■■□□ 2.63
ABR-227ENST00000574266 IFT140Q96RY7 1462 aa31.44■■■□□ 2.62
ABR-227ENST00000574266 TRIM41Q8WV44 630 aa31.43■■■□□ 2.62
ABR-227ENST00000574266 TOPBP1Q92547 1522 aa31.4■■■□□ 2.62
ABR-227ENST00000574266 DNMBPQ6XZF7 1577 aa31.3■■■□□ 2.6
ABR-227ENST00000574266 ZNF608Q9ULD9 1512 aaPredicted RBP31.25■■■□□ 2.59
ABR-227ENST00000574266 SUPT5HO00267 1087 aaKnown RBP31.24■■■□□ 2.59
ABR-227ENST00000574266 POLA1P09884 1462 aaPredicted RBP31.08■■■□□ 2.57
ABR-227ENST00000574266 EIF4G3O43432 1585 aaKnown RBP31.08■■■□□ 2.57
ABR-227ENST00000574266 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.57
ABR-227ENST00000574266 SOGA1O94964 1423 aa31.07■■■□□ 2.57
ABR-227ENST00000574266 FBLN2P98095 1184 aa31.07■■■□□ 2.56
ABR-227ENST00000574266 TARBP1Q13395 1621 aaKnown RBP31.02■■■□□ 2.56
ABR-227ENST00000574266 RAD54L2Q9Y4B4 1467 aa30.98■■■□□ 2.55
ABR-227ENST00000574266 TDRD9Q8NDG6 1382 aaKnown RBP30.95■■■□□ 2.55
ABR-227ENST00000574266 FGD5Q6ZNL6 1462 aa30.93■■■□□ 2.54
ABR-227ENST00000574266 CUX1P39880 1505 aa30.87■■■□□ 2.53
ABR-227ENST00000574266 CHMP7Q8WUX9 453 aaPredicted RBP30.86■■■□□ 2.53
ABR-227ENST00000574266 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
ABR-227ENST00000574266 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
ABR-227ENST00000574266 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
ABR-227ENST00000574266 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
ABR-227ENST00000574266 CHD1O14646 1710 aa30.8■■■□□ 2.52
ABR-227ENST00000574266 ARHGEF11O15085 1522 aa30.79■■■□□ 2.52
ABR-227ENST00000574266 CYB5RLQ6IPT4 315 aa30.77■■■□□ 2.52
ABR-227ENST00000574266 GRIN2BQ13224 1484 aa30.75■■■□□ 2.51
ABR-227ENST00000574266 SNAPC4Q5SXM2 1469 aa30.75■■■□□ 2.51
ABR-227ENST00000574266 MAGI1Q96QZ7 1491 aaPredicted RBP30.71■■■□□ 2.51
ABR-227ENST00000574266 GAPVD1Q14C86 1478 aa30.66■■■□□ 2.5
ABR-227ENST00000574266 WRNQ14191 1432 aaPredicted RBP eCLIP30.62■■■□□ 2.49
ABR-227ENST00000574266 SYNJ2O15056 1496 aa30.6■■■□□ 2.49
ABR-227ENST00000574266 SYNJ1O43426 1573 aa30.6■■■□□ 2.49
ABR-227ENST00000574266 ABCA10Q8WWZ4 1543 aa30.59■■■□□ 2.49
ABR-227ENST00000574266 PBRM1Q86U86 1689 aa30.51■■■□□ 2.47
ABR-227ENST00000574266 TRHP20396 242 aaPredicted RBP30.47■■■□□ 2.47
ABR-227ENST00000574266 ARAP1Q96P48 1450 aa30.46■■■□□ 2.47
ABR-227ENST00000574266 TOP2BQ02880 1626 aa30.45■■■□□ 2.47
ABR-227ENST00000574266 CLASP1Q7Z460 1538 aa30.44■■■□□ 2.46
ABR-227ENST00000574266 ABCA5Q8WWZ7 1642 aa30.44■■■□□ 2.46
ABR-227ENST00000574266 BIVM-ERCC5R4GMW8 1640 aa30.41■■■□□ 2.46
ABR-227ENST00000574266 GRIN2AQ12879 1464 aa30.29■■■□□ 2.44
ABR-227ENST00000574266 FHAD1B1AJZ9 1412 aa30.29■■■□□ 2.44
ABR-227ENST00000574266 ERICH3Q5RHP9 1530 aa30.24■■■□□ 2.43
ABR-227ENST00000574266 ADAMTS12P58397 1594 aa30.22■■■□□ 2.43
ABR-227ENST00000574266 NUP160Q12769 1436 aa30.15■■■□□ 2.42
ABR-227ENST00000574266 CEP170Q5SW79 1584 aa30.09■■■□□ 2.41
ABR-227ENST00000574266 JPH4Q96JJ6 628 aa30.04■■■□□ 2.4
ABR-227ENST00000574266 KIF27Q86VH2 1401 aa30.03■■■□□ 2.4
ABR-227ENST00000574266 PRG4Q92954 1404 aaPredicted RBP29.96■■■□□ 2.39
ABR-227ENST00000574266 ERCC6L2Q5T890 1561 aa29.94■■■□□ 2.38
ABR-227ENST00000574266 SHROOM2Q13796 1616 aa29.93■■■□□ 2.38
ABR-227ENST00000574266 IGF1RP08069 1367 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms