RNA–Protein interactions for RNA: ENST00000574250.1

SGSM2-210, Transcript of small G protein signaling modulator 2, humanhuman

TSL 4

Gene SGSM2, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM2-210ENST00000574250 NISCHQ9Y2I1 1504 aa48.75■■■■■ 5.39
SGSM2-210ENST00000574250 CCDC180Q9P1Z9 1646 aa43.73■■■■■ 4.59
SGSM2-210ENST00000574250 ABCC9O60706 1549 aa43.72■■■■■ 4.59
SGSM2-210ENST00000574250 RB1CC1Q8TDY2 1594 aa41.65■■■■■ 4.26
SGSM2-210ENST00000574250 NACADO15069 1562 aa41.37■■■■■ 4.21
SGSM2-210ENST00000574250 DCAF8L2P0C7V8 631 aa41.29■■■■■ 4.2
SGSM2-210ENST00000574250 DNAJC5BQ9UF47 199 aa40.93■■■■■ 4.14
SGSM2-210ENST00000574250 MYO15BQ96JP2 1530 aa40.77■■■■■ 4.12
SGSM2-210ENST00000574250 PABPN1Q86U42 306 aaKnown RBP eCLIP40.74■■■■■ 4.11
SGSM2-210ENST00000574250 UNC13AQ9UPW8 1703 aa40.63■■■■■ 4.09
SGSM2-210ENST00000574250 ZCCHC6Q5VYS8 1495 aaKnown RBP40.39■■■■■ 4.06
SGSM2-210ENST00000574250 BICRAQ9NZM4 1560 aa40.35■■■■■ 4.05
SGSM2-210ENST00000574250 DCAF1Q9Y4B6 1507 aa40.26■■■■■ 4.04
SGSM2-210ENST00000574250 SHROOM4Q9ULL8 1493 aa39.87■■■■□ 3.97
SGSM2-210ENST00000574250 SCRIBQ14160 1630 aa39.85■■■■□ 3.97
SGSM2-210ENST00000574250 CC2D2AQ9P2K1 1620 aa39.47■■■■□ 3.91
SGSM2-210ENST00000574250 EIF4G1Q04637 1599 aaKnown RBP39.4■■■■□ 3.9
SGSM2-210ENST00000574250 CECR2Q9BXF3 1484 aa39.38■■■■□ 3.9
SGSM2-210ENST00000574250 NCAPD3P42695 1498 aa38.17■■■■□ 3.7
SGSM2-210ENST00000574250 ATAD2BQ9ULI0 1458 aa38.05■■■■□ 3.68
SGSM2-210ENST00000574250 SMARCA4P51532 1647 aa38.01■■■■□ 3.68
SGSM2-210ENST00000574250 SMARCA2P51531 1590 aa37.98■■■■□ 3.67
SGSM2-210ENST00000574250 HMGXB3Q12766 1538 aa37.87■■■■□ 3.65
SGSM2-210ENST00000574250 BAZ1AQ9NRL2 1556 aaPredicted RBP37.87■■■■□ 3.65
SGSM2-210ENST00000574250 ERCC6Q03468 1493 aa37.79■■■■□ 3.64
SGSM2-210ENST00000574250 BAZ1BQ9UIG0 1483 aaKnown RBP37.72■■■■□ 3.63
SGSM2-210ENST00000574250 CUX2O14529 1486 aa37.67■■■■□ 3.62
SGSM2-210ENST00000574250 PEG3Q9GZU2 1588 aa37.63■■■■□ 3.61
SGSM2-210ENST00000574250 DNAJC5Q9H3Z4 198 aa37.62■■■■□ 3.61
SGSM2-210ENST00000574250 MROH2BQ7Z745 1585 aa37.55■■■■□ 3.6
SGSM2-210ENST00000574250 NESP48681 1621 aa37.54■■■■□ 3.6
SGSM2-210ENST00000574250 LAMC3Q9Y6N6 1575 aa37.32■■■■□ 3.56
SGSM2-210ENST00000574250 PDS5BQ9NTI5 1447 aa37.14■■■■□ 3.54
SGSM2-210ENST00000574250 THOC2Q8NI27 1593 aaKnown RBP37.12■■■■□ 3.53
SGSM2-210ENST00000574250 WIZO95785 1651 aa37.11■■■■□ 3.53
SGSM2-210ENST00000574250 KIF21AQ7Z4S6 1674 aa37.05■■■■□ 3.52
SGSM2-210ENST00000574250 CADPSQ9ULU8 1353 aa37.04■■■■□ 3.52
SGSM2-210ENST00000574250 RSF1Q96T23 1441 aaPredicted RBP36.81■■■■□ 3.48
SGSM2-210ENST00000574250 MRC2Q9UBG0 1479 aa36.78■■■■□ 3.48
SGSM2-210ENST00000574250 CEP164Q9UPV0 1460 aa36.66■■■■□ 3.46
SGSM2-210ENST00000574250 WDR62O43379 1518 aa36.65■■■■□ 3.46
SGSM2-210ENST00000574250 TOP2AP11388 1531 aaKnown RBP36.65■■■■□ 3.46
SGSM2-210ENST00000574250 FANCD2Q9BXW9 1451 aa36.61■■■■□ 3.45
SGSM2-210ENST00000574250 CFTRP13569 1480 aa36.6■■■■□ 3.45
SGSM2-210ENST00000574250 URB2Q14146 1524 aaKnown RBP36.26■■■■□ 3.4
SGSM2-210ENST00000574250 CCDC88BA6NC98 1476 aa36.25■■■■□ 3.39
SGSM2-210ENST00000574250 PRDM2Q13029 1718 aa36.22■■■■□ 3.39
SGSM2-210ENST00000574250 TRIM41Q8WV44 630 aa36.05■■■■□ 3.36
SGSM2-210ENST00000574250 OSCARQ8IYS5 282 aa36.03■■■■□ 3.36
SGSM2-210ENST00000574250 IFT140Q96RY7 1462 aa35.92■■■■□ 3.34
SGSM2-210ENST00000574250 TOPBP1Q92547 1522 aa35.91■■■■□ 3.34
SGSM2-210ENST00000574250 ABCC8Q09428 1581 aa35.9■■■■□ 3.34
SGSM2-210ENST00000574250 ZNF608Q9ULD9 1512 aaPredicted RBP35.81■■■■□ 3.32
SGSM2-210ENST00000574250 DNMBPQ6XZF7 1577 aa35.78■■■■□ 3.32
SGSM2-210ENST00000574250 EIF4G3O43432 1585 aaKnown RBP35.62■■■■□ 3.29
SGSM2-210ENST00000574250 TARBP1Q13395 1621 aaKnown RBP35.55■■■■□ 3.28
SGSM2-210ENST00000574250 AQRO60306 1485 aaKnown RBP eCLIP35.54■■■■□ 3.28
SGSM2-210ENST00000574250 POLA1P09884 1462 aaPredicted RBP35.53■■■■□ 3.28
SGSM2-210ENST00000574250 RIMBP3CA6NJZ7 1639 aa35.46■■■■□ 3.27
SGSM2-210ENST00000574250 RIMBP3BA6NNM3 1639 aa35.46■■■■□ 3.27
SGSM2-210ENST00000574250 RIMBP3Q9UFD9 1639 aa35.46■■■■□ 3.27
SGSM2-210ENST00000574250 SOGA1O94964 1423 aa35.43■■■■□ 3.26
SGSM2-210ENST00000574250 RAD54L2Q9Y4B4 1467 aa35.41■■■■□ 3.26
SGSM2-210ENST00000574250 FBLN2P98095 1184 aa35.39■■■■□ 3.26
SGSM2-210ENST00000574250 CHD1O14646 1710 aa35.36■■■■□ 3.25
SGSM2-210ENST00000574250 ARHGEF11O15085 1522 aa35.36■■■■□ 3.25
SGSM2-210ENST00000574250 TDRD9Q8NDG6 1382 aaKnown RBP35.34■■■■□ 3.25
SGSM2-210ENST00000574250 FGD5Q6ZNL6 1462 aa35.33■■■■□ 3.25
SGSM2-210ENST00000574250 SUPT5HO00267 1087 aaKnown RBP35.32■■■■□ 3.24
SGSM2-210ENST00000574250 CUX1P39880 1505 aa35.27■■■■□ 3.24
SGSM2-210ENST00000574250 WDR97A6NE52 1622 aa35.24■■■■□ 3.23
SGSM2-210ENST00000574250 CYB5RLQ6IPT4 315 aa35.18■■■■□ 3.22
SGSM2-210ENST00000574250 SNAPC4Q5SXM2 1469 aa35.16■■■■□ 3.22
SGSM2-210ENST00000574250 CHMP7Q8WUX9 453 aaPredicted RBP35.13■■■■□ 3.21
SGSM2-210ENST00000574250 GRIN2BQ13224 1484 aa35.1■■■■□ 3.21
SGSM2-210ENST00000574250 MAGI1Q96QZ7 1491 aaPredicted RBP35.09■■■■□ 3.21
SGSM2-210ENST00000574250 ARAP1Q96P48 1450 aa34.99■■■■□ 3.19
SGSM2-210ENST00000574250 SYNJ1O43426 1573 aa34.99■■■■□ 3.19
SGSM2-210ENST00000574250 GAPVD1Q14C86 1478 aa34.98■■■■□ 3.19
SGSM2-210ENST00000574250 SYNJ2O15056 1496 aa34.97■■■■□ 3.19
SGSM2-210ENST00000574250 PBRM1Q86U86 1689 aa34.93■■■■□ 3.18
SGSM2-210ENST00000574250 CLASP1Q7Z460 1538 aa34.93■■■■□ 3.18
SGSM2-210ENST00000574250 ABCA10Q8WWZ4 1543 aa34.93■■■■□ 3.18
SGSM2-210ENST00000574250 ABCA5Q8WWZ7 1642 aa34.84■■■■□ 3.17
SGSM2-210ENST00000574250 WRNQ14191 1432 aaPredicted RBP eCLIP34.84■■■■□ 3.17
SGSM2-210ENST00000574250 TRHP20396 242 aaPredicted RBP34.82■■■■□ 3.16
SGSM2-210ENST00000574250 TOP2BQ02880 1626 aa34.74■■■■□ 3.15
SGSM2-210ENST00000574250 BIVM-ERCC5R4GMW8 1640 aa34.73■■■■□ 3.15
SGSM2-210ENST00000574250 GRIN2AQ12879 1464 aa34.63■■■■□ 3.13
SGSM2-210ENST00000574250 ADAMTS12P58397 1594 aa34.59■■■■□ 3.13
SGSM2-210ENST00000574250 FHAD1B1AJZ9 1412 aa34.55■■■■□ 3.12
SGSM2-210ENST00000574250 ERICH3Q5RHP9 1530 aa34.5■■■■□ 3.11
SGSM2-210ENST00000574250 NUP160Q12769 1436 aa34.49■■■■□ 3.11
SGSM2-210ENST00000574250 CEP170Q5SW79 1584 aa34.47■■■■□ 3.11
SGSM2-210ENST00000574250 ERCC6L2Q5T890 1561 aa34.38■■■■□ 3.09
SGSM2-210ENST00000574250 SHROOM2Q13796 1616 aa34.32■■■■□ 3.08
SGSM2-210ENST00000574250 JPH4Q96JJ6 628 aa34.22■■■■□ 3.07
SGSM2-210ENST00000574250 PRG4Q92954 1404 aaPredicted RBP34.21■■■■□ 3.07
SGSM2-210ENST00000574250 KIF27Q86VH2 1401 aa34.13■■■■□ 3.05
SGSM2-210ENST00000574250 RUSC2Q8N2Y8 1516 aa34.09■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms