RNA–Protein interactions for RNA: ENST00000574175.1

TRAP1-209, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-209ENST00000574175 NISCHQ9Y2I1 1504 aa40.45■■■■■ 4.07
TRAP1-209ENST00000574175 CCDC180Q9P1Z9 1646 aa36.05■■■■□ 3.36
TRAP1-209ENST00000574175 ABCC9O60706 1549 aa35.66■■■■□ 3.3
TRAP1-209ENST00000574175 RB1CC1Q8TDY2 1594 aa34.11■■■■□ 3.05
TRAP1-209ENST00000574175 DCAF8L2P0C7V8 631 aa34■■■■□ 3.03
TRAP1-209ENST00000574175 NACADO15069 1562 aa33.98■■■■□ 3.03
TRAP1-209ENST00000574175 ZCCHC6Q5VYS8 1495 aaKnown RBP33.64■■■□□ 2.98
TRAP1-209ENST00000574175 MYO15BQ96JP2 1530 aa33.63■■■□□ 2.97
TRAP1-209ENST00000574175 DCAF1Q9Y4B6 1507 aa33.4■■■□□ 2.94
TRAP1-209ENST00000574175 UNC13AQ9UPW8 1703 aa33.29■■■□□ 2.92
TRAP1-209ENST00000574175 PABPN1Q86U42 306 aaKnown RBP eCLIP33.28■■■□□ 2.92
TRAP1-209ENST00000574175 BICRAQ9NZM4 1560 aa33.09■■■□□ 2.89
TRAP1-209ENST00000574175 SCRIBQ14160 1630 aa32.97■■■□□ 2.87
TRAP1-209ENST00000574175 DNAJC5BQ9UF47 199 aa32.95■■■□□ 2.87
TRAP1-209ENST00000574175 SHROOM4Q9ULL8 1493 aa32.67■■■□□ 2.82
TRAP1-209ENST00000574175 EIF4G1Q04637 1599 aaKnown RBP32.24■■■□□ 2.75
TRAP1-209ENST00000574175 CC2D2AQ9P2K1 1620 aa32.19■■■□□ 2.74
TRAP1-209ENST00000574175 CECR2Q9BXF3 1484 aa32.05■■■□□ 2.72
TRAP1-209ENST00000574175 SMARCA4P51532 1647 aa31.46■■■□□ 2.63
TRAP1-209ENST00000574175 BAZ1AQ9NRL2 1556 aaPredicted RBP31.37■■■□□ 2.61
TRAP1-209ENST00000574175 ATAD2BQ9ULI0 1458 aa31.36■■■□□ 2.61
TRAP1-209ENST00000574175 NCAPD3P42695 1498 aa31.35■■■□□ 2.61
TRAP1-209ENST00000574175 SMARCA2P51531 1590 aa31.3■■■□□ 2.6
TRAP1-209ENST00000574175 MROH2BQ7Z745 1585 aa31.2■■■□□ 2.58
TRAP1-209ENST00000574175 HMGXB3Q12766 1538 aa31.19■■■□□ 2.58
TRAP1-209ENST00000574175 BAZ1BQ9UIG0 1483 aaKnown RBP31.11■■■□□ 2.57
TRAP1-209ENST00000574175 PEG3Q9GZU2 1588 aa31.1■■■□□ 2.57
TRAP1-209ENST00000574175 WIZO95785 1651 aa30.84■■■□□ 2.53
TRAP1-209ENST00000574175 NESP48681 1621 aa30.76■■■□□ 2.52
TRAP1-209ENST00000574175 ERCC6Q03468 1493 aa30.76■■■□□ 2.52
TRAP1-209ENST00000574175 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
TRAP1-209ENST00000574175 LAMC3Q9Y6N6 1575 aa30.58■■■□□ 2.49
TRAP1-209ENST00000574175 TOP2AP11388 1531 aaKnown RBP30.49■■■□□ 2.47
TRAP1-209ENST00000574175 CUX2O14529 1486 aa30.48■■■□□ 2.47
TRAP1-209ENST00000574175 CADPSQ9ULU8 1353 aa30.45■■■□□ 2.47
TRAP1-209ENST00000574175 PDS5BQ9NTI5 1447 aa30.4■■■□□ 2.46
TRAP1-209ENST00000574175 KIF21AQ7Z4S6 1674 aa30.36■■■□□ 2.45
TRAP1-209ENST00000574175 THOC2Q8NI27 1593 aaKnown RBP30.32■■■□□ 2.45
TRAP1-209ENST00000574175 CFTRP13569 1480 aa30.2■■■□□ 2.43
TRAP1-209ENST00000574175 CCDC88BA6NC98 1476 aa30.13■■■□□ 2.41
TRAP1-209ENST00000574175 MRC2Q9UBG0 1479 aa30.13■■■□□ 2.41
TRAP1-209ENST00000574175 FANCD2Q9BXW9 1451 aa30.12■■■□□ 2.41
TRAP1-209ENST00000574175 CEP164Q9UPV0 1460 aa30.12■■■□□ 2.41
TRAP1-209ENST00000574175 WDR62O43379 1518 aa30.02■■■□□ 2.4
TRAP1-209ENST00000574175 PRDM2Q13029 1718 aa29.91■■■□□ 2.38
TRAP1-209ENST00000574175 DNAJC5Q9H3Z4 198 aa29.87■■■□□ 2.37
TRAP1-209ENST00000574175 URB2Q14146 1524 aaKnown RBP29.85■■■□□ 2.37
TRAP1-209ENST00000574175 SUPT5HO00267 1087 aaKnown RBP29.81■■■□□ 2.36
TRAP1-209ENST00000574175 TOPBP1Q92547 1522 aa29.61■■■□□ 2.33
TRAP1-209ENST00000574175 DNMBPQ6XZF7 1577 aa29.54■■■□□ 2.32
TRAP1-209ENST00000574175 ABCC8Q09428 1581 aa29.53■■■□□ 2.32
TRAP1-209ENST00000574175 IFT140Q96RY7 1462 aa29.49■■■□□ 2.31
TRAP1-209ENST00000574175 ZNF608Q9ULD9 1512 aaPredicted RBP29.41■■■□□ 2.3
TRAP1-209ENST00000574175 POLA1P09884 1462 aaPredicted RBP29.35■■■□□ 2.29
TRAP1-209ENST00000574175 CUX1P39880 1505 aa29.29■■■□□ 2.28
TRAP1-209ENST00000574175 TARBP1Q13395 1621 aaKnown RBP29.28■■■□□ 2.28
TRAP1-209ENST00000574175 EIF4G3O43432 1585 aaKnown RBP29.26■■■□□ 2.28
TRAP1-209ENST00000574175 FGD5Q6ZNL6 1462 aa29.24■■■□□ 2.27
TRAP1-209ENST00000574175 RAD54L2Q9Y4B4 1467 aa29.24■■■□□ 2.27
TRAP1-209ENST00000574175 SOGA1O94964 1423 aa29.2■■■□□ 2.27
TRAP1-209ENST00000574175 AQRO60306 1485 aaKnown RBP eCLIP29.2■■■□□ 2.262e-8■■□□□ 13.4
TRAP1-209ENST00000574175 OSCARQ8IYS5 282 aa29.16■■■□□ 2.26
TRAP1-209ENST00000574175 TDRD9Q8NDG6 1382 aaKnown RBP29.11■■■□□ 2.25
TRAP1-209ENST00000574175 WDR97A6NE52 1622 aa29■■■□□ 2.23
TRAP1-209ENST00000574175 WRNQ14191 1432 aaPredicted RBP eCLIP28.99■■■□□ 2.232e-6■■□□□ 11.9
TRAP1-209ENST00000574175 FBLN2P98095 1184 aa28.95■■■□□ 2.22
TRAP1-209ENST00000574175 SYNJ1O43426 1573 aa28.94■■■□□ 2.22
TRAP1-209ENST00000574175 SNAPC4Q5SXM2 1469 aa28.94■■■□□ 2.22
TRAP1-209ENST00000574175 CHD1O14646 1710 aa28.93■■■□□ 2.22
TRAP1-209ENST00000574175 TOP2BQ02880 1626 aa28.93■■■□□ 2.22
TRAP1-209ENST00000574175 BIVM-ERCC5R4GMW8 1640 aa28.92■■■□□ 2.22
TRAP1-209ENST00000574175 ABCA10Q8WWZ4 1543 aa28.91■■■□□ 2.22
TRAP1-209ENST00000574175 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
TRAP1-209ENST00000574175 TRIM41Q8WV44 630 aa28.88■■■□□ 2.21
TRAP1-209ENST00000574175 GAPVD1Q14C86 1478 aa28.87■■■□□ 2.21
TRAP1-209ENST00000574175 MAGI1Q96QZ7 1491 aaPredicted RBP28.85■■■□□ 2.21
TRAP1-209ENST00000574175 ABCA5Q8WWZ7 1642 aa28.83■■■□□ 2.21
TRAP1-209ENST00000574175 PBRM1Q86U86 1689 aa28.81■■■□□ 2.2
TRAP1-209ENST00000574175 CHMP7Q8WUX9 453 aaPredicted RBP28.78■■■□□ 2.2
TRAP1-209ENST00000574175 RIMBP3CA6NJZ7 1639 aa28.75■■■□□ 2.19
TRAP1-209ENST00000574175 RIMBP3BA6NNM3 1639 aa28.75■■■□□ 2.19
TRAP1-209ENST00000574175 RIMBP3Q9UFD9 1639 aa28.75■■■□□ 2.19
TRAP1-209ENST00000574175 SYNJ2O15056 1496 aa28.74■■■□□ 2.19
TRAP1-209ENST00000574175 ARHGEF11O15085 1522 aa28.73■■■□□ 2.19
TRAP1-209ENST00000574175 CLASP1Q7Z460 1538 aa28.61■■■□□ 2.17
TRAP1-209ENST00000574175 ADAMTS12P58397 1594 aa28.6■■■□□ 2.17
TRAP1-209ENST00000574175 ERICH3Q5RHP9 1530 aa28.55■■■□□ 2.16
TRAP1-209ENST00000574175 GRIN2AQ12879 1464 aa28.53■■■□□ 2.16
TRAP1-209ENST00000574175 FHAD1B1AJZ9 1412 aa28.52■■■□□ 2.16
TRAP1-209ENST00000574175 ARAP1Q96P48 1450 aa28.49■■■□□ 2.15
TRAP1-209ENST00000574175 CYB5RLQ6IPT4 315 aa28.49■■■□□ 2.15
TRAP1-209ENST00000574175 NUP160Q12769 1436 aa28.41■■■□□ 2.14
TRAP1-209ENST00000574175 KIF27Q86VH2 1401 aa28.41■■■□□ 2.14
TRAP1-209ENST00000574175 CEP170Q5SW79 1584 aa28.41■■■□□ 2.14
TRAP1-209ENST00000574175 IGF1RP08069 1367 aa28.3■■■□□ 2.12
TRAP1-209ENST00000574175 ERCC6L2Q5T890 1561 aa28.24■■■□□ 2.11
TRAP1-209ENST00000574175 CUL7Q14999 1698 aa28.23■■■□□ 2.11
TRAP1-209ENST00000574175 SHROOM2Q13796 1616 aa28.19■■■□□ 2.1
TRAP1-209ENST00000574175 RUSC2Q8N2Y8 1516 aa28.18■■■□□ 2.1
TRAP1-209ENST00000574175 CARMIL1Q5VZK9 1371 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms