RNA–Protein interactions for RNA: ENST00000574158.1

POLR2A-203, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 461 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-203ENST00000574158 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
POLR2A-203ENST00000574158 CCDC180Q9P1Z9 1646 aa31.05■■■□□ 2.56
POLR2A-203ENST00000574158 ABCC9O60706 1549 aa30.46■■■□□ 2.47
POLR2A-203ENST00000574158 RB1CC1Q8TDY2 1594 aa29.25■■■□□ 2.27
POLR2A-203ENST00000574158 NACADO15069 1562 aa29.16■■■□□ 2.26
POLR2A-203ENST00000574158 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
POLR2A-203ENST00000574158 ZCCHC6Q5VYS8 1495 aaKnown RBP28.91■■■□□ 2.22
POLR2A-203ENST00000574158 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
POLR2A-203ENST00000574158 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
POLR2A-203ENST00000574158 UNC13AQ9UPW8 1703 aa28.7■■■□□ 2.19
POLR2A-203ENST00000574158 BICRAQ9NZM4 1560 aa28.42■■■□□ 2.14
POLR2A-203ENST00000574158 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
POLR2A-203ENST00000574158 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
POLR2A-203ENST00000574158 DNAJC5BQ9UF47 199 aa28.1■■■□□ 2.09
POLR2A-203ENST00000574158 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
POLR2A-203ENST00000574158 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
POLR2A-203ENST00000574158 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
POLR2A-203ENST00000574158 CECR2Q9BXF3 1484 aa27.39■■□□□ 1.98
POLR2A-203ENST00000574158 SMARCA4P51532 1647 aa27.02■■□□□ 1.92
POLR2A-203ENST00000574158 BAZ1AQ9NRL2 1556 aaPredicted RBP26.92■■□□□ 1.9
POLR2A-203ENST00000574158 NCAPD3P42695 1498 aa26.87■■□□□ 1.89
POLR2A-203ENST00000574158 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
POLR2A-203ENST00000574158 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
POLR2A-203ENST00000574158 HMGXB3Q12766 1538 aa26.8■■□□□ 1.88
POLR2A-203ENST00000574158 PEG3Q9GZU2 1588 aa26.78■■□□□ 1.88
POLR2A-203ENST00000574158 MROH2BQ7Z745 1585 aa26.75■■□□□ 1.87
POLR2A-203ENST00000574158 BAZ1BQ9UIG0 1483 aaKnown RBP26.63■■□□□ 1.85
POLR2A-203ENST00000574158 WIZO95785 1651 aa26.47■■□□□ 1.83
POLR2A-203ENST00000574158 NESP48681 1621 aa26.32■■□□□ 1.8
POLR2A-203ENST00000574158 RSF1Q96T23 1441 aaPredicted RBP26.32■■□□□ 1.8
POLR2A-203ENST00000574158 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
POLR2A-203ENST00000574158 ERCC6Q03468 1493 aa26.24■■□□□ 1.79
POLR2A-203ENST00000574158 TOP2AP11388 1531 aaKnown RBP26.19■■□□□ 1.78
POLR2A-203ENST00000574158 CUX2O14529 1486 aa26.11■■□□□ 1.77
POLR2A-203ENST00000574158 KIF21AQ7Z4S6 1674 aa26.08■■□□□ 1.77
POLR2A-203ENST00000574158 THOC2Q8NI27 1593 aaKnown RBP26.06■■□□□ 1.76
POLR2A-203ENST00000574158 CADPSQ9ULU8 1353 aa26.05■■□□□ 1.76
POLR2A-203ENST00000574158 PDS5BQ9NTI5 1447 aa25.99■■□□□ 1.75
POLR2A-203ENST00000574158 CFTRP13569 1480 aa25.9■■□□□ 1.74
POLR2A-203ENST00000574158 PRDM2Q13029 1718 aa25.83■■□□□ 1.72
POLR2A-203ENST00000574158 CCDC88BA6NC98 1476 aa25.81■■□□□ 1.72
POLR2A-203ENST00000574158 MRC2Q9UBG0 1479 aa25.8■■□□□ 1.72
POLR2A-203ENST00000574158 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
POLR2A-203ENST00000574158 CEP164Q9UPV0 1460 aa25.78■■□□□ 1.72
POLR2A-203ENST00000574158 WDR62O43379 1518 aa25.77■■□□□ 1.72
POLR2A-203ENST00000574158 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
POLR2A-203ENST00000574158 DNAJC5Q9H3Z4 198 aa25.45■■□□□ 1.66
POLR2A-203ENST00000574158 TOPBP1Q92547 1522 aa25.37■■□□□ 1.65
POLR2A-203ENST00000574158 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
POLR2A-203ENST00000574158 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
POLR2A-203ENST00000574158 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
POLR2A-203ENST00000574158 IFT140Q96RY7 1462 aa25.24■■□□□ 1.63
POLR2A-203ENST00000574158 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
POLR2A-203ENST00000574158 TARBP1Q13395 1621 aaKnown RBP25.15■■□□□ 1.62
POLR2A-203ENST00000574158 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
POLR2A-203ENST00000574158 EIF4G3O43432 1585 aaKnown RBP25.12■■□□□ 1.61
POLR2A-203ENST00000574158 CUX1P39880 1505 aa25.12■■□□□ 1.61
POLR2A-203ENST00000574158 FGD5Q6ZNL6 1462 aa25.05■■□□□ 1.6
POLR2A-203ENST00000574158 RAD54L2Q9Y4B4 1467 aa25.01■■□□□ 1.59
POLR2A-203ENST00000574158 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
POLR2A-203ENST00000574158 SOGA1O94964 1423 aa24.96■■□□□ 1.59
POLR2A-203ENST00000574158 AQRO60306 1485 aaKnown RBP eCLIP24.95■■□□□ 1.58
POLR2A-203ENST00000574158 BIVM-ERCC5R4GMW8 1640 aa24.89■■□□□ 1.57
POLR2A-203ENST00000574158 CHD1O14646 1710 aa24.86■■□□□ 1.57
POLR2A-203ENST00000574158 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
POLR2A-203ENST00000574158 SYNJ1O43426 1573 aa24.85■■□□□ 1.57
POLR2A-203ENST00000574158 TDRD9Q8NDG6 1382 aaKnown RBP24.84■■□□□ 1.57
POLR2A-203ENST00000574158 OSCARQ8IYS5 282 aa24.84■■□□□ 1.57
POLR2A-203ENST00000574158 WRNQ14191 1432 aaPredicted RBP eCLIP24.82■■□□□ 1.56
POLR2A-203ENST00000574158 ABCA10Q8WWZ4 1543 aa24.81■■□□□ 1.56
POLR2A-203ENST00000574158 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
POLR2A-203ENST00000574158 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
POLR2A-203ENST00000574158 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
POLR2A-203ENST00000574158 GRIN2BQ13224 1484 aa24.74■■□□□ 1.55
POLR2A-203ENST00000574158 MAGI1Q96QZ7 1491 aaPredicted RBP24.73■■□□□ 1.55
POLR2A-203ENST00000574158 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.55
POLR2A-203ENST00000574158 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.53
POLR2A-203ENST00000574158 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.53
POLR2A-203ENST00000574158 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.53
POLR2A-203ENST00000574158 SYNJ2O15056 1496 aa24.62■■□□□ 1.53
POLR2A-203ENST00000574158 ARHGEF11O15085 1522 aa24.59■■□□□ 1.53
POLR2A-203ENST00000574158 FBLN2P98095 1184 aa24.58■■□□□ 1.53
POLR2A-203ENST00000574158 CLASP1Q7Z460 1538 aa24.57■■□□□ 1.52
POLR2A-203ENST00000574158 ADAMTS12P58397 1594 aa24.56■■□□□ 1.52
POLR2A-203ENST00000574158 ERICH3Q5RHP9 1530 aa24.51■■□□□ 1.51
POLR2A-203ENST00000574158 CHMP7Q8WUX9 453 aaPredicted RBP24.5■■□□□ 1.51
POLR2A-203ENST00000574158 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
POLR2A-203ENST00000574158 GRIN2AQ12879 1464 aa24.45■■□□□ 1.5
POLR2A-203ENST00000574158 FHAD1B1AJZ9 1412 aa24.42■■□□□ 1.5
POLR2A-203ENST00000574158 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
POLR2A-203ENST00000574158 CEP170Q5SW79 1584 aa24.37■■□□□ 1.49
POLR2A-203ENST00000574158 NUP160Q12769 1436 aa24.35■■□□□ 1.49
POLR2A-203ENST00000574158 KIF27Q86VH2 1401 aa24.29■■□□□ 1.48
POLR2A-203ENST00000574158 CUL7Q14999 1698 aa24.27■■□□□ 1.48
POLR2A-203ENST00000574158 SHROOM2Q13796 1616 aa24.26■■□□□ 1.47
POLR2A-203ENST00000574158 RUSC2Q8N2Y8 1516 aa24.21■■□□□ 1.47
POLR2A-203ENST00000574158 IGF1RP08069 1367 aa24.21■■□□□ 1.47
POLR2A-203ENST00000574158 CYB5RLQ6IPT4 315 aa24.21■■□□□ 1.47
POLR2A-203ENST00000574158 ERCC6L2Q5T890 1561 aa24.2■■□□□ 1.46
POLR2A-203ENST00000574158 CARMIL1Q5VZK9 1371 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms