RNA–Protein interactions for RNA: ENST00000574139.5

ABR-225, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-225ENST00000574139 NISCHQ9Y2I1 1504 aa44.07■■■■■ 4.65
ABR-225ENST00000574139 CCDC180Q9P1Z9 1646 aa39.31■■■■□ 3.88
ABR-225ENST00000574139 ABCC9O60706 1549 aa38.85■■■■□ 3.81
ABR-225ENST00000574139 RB1CC1Q8TDY2 1594 aa37.17■■■■□ 3.54
ABR-225ENST00000574139 DCAF8L2P0C7V8 631 aa37.03■■■■□ 3.52
ABR-225ENST00000574139 NACADO15069 1562 aa37.02■■■■□ 3.52
ABR-225ENST00000574139 MYO15BQ96JP2 1530 aa36.64■■■■□ 3.46
ABR-225ENST00000574139 ZCCHC6Q5VYS8 1495 aaKnown RBP36.64■■■■□ 3.46
ABR-225ENST00000574139 UNC13AQ9UPW8 1703 aa36.41■■■■□ 3.42
ABR-225ENST00000574139 DCAF1Q9Y4B6 1507 aa36.39■■■■□ 3.42
ABR-225ENST00000574139 PABPN1Q86U42 306 aaKnown RBP eCLIP36.26■■■■□ 3.4
ABR-225ENST00000574139 BICRAQ9NZM4 1560 aa36.09■■■■□ 3.37
ABR-225ENST00000574139 DNAJC5BQ9UF47 199 aa35.97■■■■□ 3.35
ABR-225ENST00000574139 SCRIBQ14160 1630 aa35.93■■■■□ 3.34
ABR-225ENST00000574139 SHROOM4Q9ULL8 1493 aa35.56■■■■□ 3.28
ABR-225ENST00000574139 EIF4G1Q04637 1599 aaKnown RBP35.15■■■■□ 3.22
ABR-225ENST00000574139 CC2D2AQ9P2K1 1620 aa35.11■■■■□ 3.21
ABR-225ENST00000574139 CECR2Q9BXF3 1484 aa34.91■■■■□ 3.18
ABR-225ENST00000574139 SMARCA4P51532 1647 aa34.29■■■■□ 3.08
ABR-225ENST00000574139 BAZ1AQ9NRL2 1556 aaPredicted RBP34.17■■■■□ 3.06
ABR-225ENST00000574139 ATAD2BQ9ULI0 1458 aa34.17■■■■□ 3.06
ABR-225ENST00000574139 NCAPD3P42695 1498 aa34.16■■■■□ 3.06
ABR-225ENST00000574139 SMARCA2P51531 1590 aa34.08■■■■□ 3.05
ABR-225ENST00000574139 MROH2BQ7Z745 1585 aa34■■■■□ 3.03
ABR-225ENST00000574139 HMGXB3Q12766 1538 aa33.97■■■■□ 3.03
ABR-225ENST00000574139 PEG3Q9GZU2 1588 aa33.91■■■■□ 3.02
ABR-225ENST00000574139 BAZ1BQ9UIG0 1483 aaKnown RBP33.88■■■■□ 3.01
ABR-225ENST00000574139 WIZO95785 1651 aa33.64■■■□□ 2.98
ABR-225ENST00000574139 NESP48681 1621 aa33.54■■■□□ 2.96
ABR-225ENST00000574139 ERCC6Q03468 1493 aa33.48■■■□□ 2.95
ABR-225ENST00000574139 RSF1Q96T23 1441 aaPredicted RBP33.46■■■□□ 2.95
ABR-225ENST00000574139 LAMC3Q9Y6N6 1575 aa33.33■■■□□ 2.93
ABR-225ENST00000574139 TOP2AP11388 1531 aaKnown RBP33.21■■■□□ 2.91
ABR-225ENST00000574139 CUX2O14529 1486 aa33.2■■■□□ 2.91
ABR-225ENST00000574139 CADPSQ9ULU8 1353 aa33.17■■■□□ 2.9
ABR-225ENST00000574139 KIF21AQ7Z4S6 1674 aa33.13■■■□□ 2.89
ABR-225ENST00000574139 PDS5BQ9NTI5 1447 aa33.11■■■□□ 2.89
ABR-225ENST00000574139 THOC2Q8NI27 1593 aaKnown RBP33.07■■■□□ 2.88
ABR-225ENST00000574139 CFTRP13569 1480 aa32.9■■■□□ 2.86
ABR-225ENST00000574139 CCDC88BA6NC98 1476 aa32.85■■■□□ 2.85
ABR-225ENST00000574139 FANCD2Q9BXW9 1451 aa32.81■■■□□ 2.84
ABR-225ENST00000574139 MRC2Q9UBG0 1479 aa32.81■■■□□ 2.84
ABR-225ENST00000574139 CEP164Q9UPV0 1460 aa32.79■■■□□ 2.84
ABR-225ENST00000574139 WDR62O43379 1518 aa32.72■■■□□ 2.83
ABR-225ENST00000574139 PRDM2Q13029 1718 aa32.67■■■□□ 2.82
ABR-225ENST00000574139 DNAJC5Q9H3Z4 198 aa32.58■■■□□ 2.81
ABR-225ENST00000574139 URB2Q14146 1524 aaKnown RBP32.53■■■□□ 2.8
ABR-225ENST00000574139 SUPT5HO00267 1087 aaKnown RBP32.44■■■□□ 2.78
ABR-225ENST00000574139 TOPBP1Q92547 1522 aa32.26■■■□□ 2.76
ABR-225ENST00000574139 DNMBPQ6XZF7 1577 aa32.18■■■□□ 2.74
ABR-225ENST00000574139 ABCC8Q09428 1581 aa32.16■■■□□ 2.74
ABR-225ENST00000574139 IFT140Q96RY7 1462 aa32.1■■■□□ 2.73
ABR-225ENST00000574139 ZNF608Q9ULD9 1512 aaPredicted RBP32.05■■■□□ 2.72
ABR-225ENST00000574139 POLA1P09884 1462 aaPredicted RBP31.96■■■□□ 2.71
ABR-225ENST00000574139 TARBP1Q13395 1621 aaKnown RBP31.93■■■□□ 2.7
ABR-225ENST00000574139 CUX1P39880 1505 aa31.91■■■□□ 2.7
ABR-225ENST00000574139 EIF4G3O43432 1585 aaKnown RBP31.9■■■□□ 2.7
ABR-225ENST00000574139 RAD54L2Q9Y4B4 1467 aa31.87■■■□□ 2.69
ABR-225ENST00000574139 FGD5Q6ZNL6 1462 aa31.84■■■□□ 2.69
ABR-225ENST00000574139 AQRO60306 1485 aaKnown RBP eCLIP31.82■■■□□ 2.68
ABR-225ENST00000574139 SOGA1O94964 1423 aa31.82■■■□□ 2.68
ABR-225ENST00000574139 OSCARQ8IYS5 282 aa31.78■■■□□ 2.68
ABR-225ENST00000574139 TDRD9Q8NDG6 1382 aaKnown RBP31.71■■■□□ 2.67
ABR-225ENST00000574139 WDR97A6NE52 1622 aa31.6■■■□□ 2.65
ABR-225ENST00000574139 CHD1O14646 1710 aa31.59■■■□□ 2.65
ABR-225ENST00000574139 WRNQ14191 1432 aaPredicted RBP eCLIP31.56■■■□□ 2.64
ABR-225ENST00000574139 SYNJ1O43426 1573 aa31.54■■■□□ 2.64
ABR-225ENST00000574139 BIVM-ERCC5R4GMW8 1640 aa31.53■■■□□ 2.64
ABR-225ENST00000574139 TOP2BQ02880 1626 aa31.53■■■□□ 2.64
ABR-225ENST00000574139 FBLN2P98095 1184 aa31.51■■■□□ 2.63
ABR-225ENST00000574139 SNAPC4Q5SXM2 1469 aa31.51■■■□□ 2.63
ABR-225ENST00000574139 ABCA10Q8WWZ4 1543 aa31.49■■■□□ 2.63
ABR-225ENST00000574139 GRIN2BQ13224 1484 aa31.46■■■□□ 2.63
ABR-225ENST00000574139 TRIM41Q8WV44 630 aa31.45■■■□□ 2.63
ABR-225ENST00000574139 GAPVD1Q14C86 1478 aa31.45■■■□□ 2.62
ABR-225ENST00000574139 PBRM1Q86U86 1689 aa31.44■■■□□ 2.62
ABR-225ENST00000574139 ABCA5Q8WWZ7 1642 aa31.42■■■□□ 2.62
ABR-225ENST00000574139 MAGI1Q96QZ7 1491 aaPredicted RBP31.4■■■□□ 2.62
ABR-225ENST00000574139 RIMBP3CA6NJZ7 1639 aa31.37■■■□□ 2.61
ABR-225ENST00000574139 RIMBP3BA6NNM3 1639 aa31.37■■■□□ 2.61
ABR-225ENST00000574139 RIMBP3Q9UFD9 1639 aa31.37■■■□□ 2.61
ABR-225ENST00000574139 CHMP7Q8WUX9 453 aaPredicted RBP31.33■■■□□ 2.61
ABR-225ENST00000574139 ARHGEF11O15085 1522 aa31.3■■■□□ 2.6
ABR-225ENST00000574139 SYNJ2O15056 1496 aa31.3■■■□□ 2.6
ABR-225ENST00000574139 CLASP1Q7Z460 1538 aa31.19■■■□□ 2.58
ABR-225ENST00000574139 ADAMTS12P58397 1594 aa31.15■■■□□ 2.58
ABR-225ENST00000574139 ERICH3Q5RHP9 1530 aa31.1■■■□□ 2.57
ABR-225ENST00000574139 GRIN2AQ12879 1464 aa31.08■■■□□ 2.57
ABR-225ENST00000574139 FHAD1B1AJZ9 1412 aa31.06■■■□□ 2.56
ABR-225ENST00000574139 ARAP1Q96P48 1450 aa31.04■■■□□ 2.56
ABR-225ENST00000574139 CYB5RLQ6IPT4 315 aa31.04■■■□□ 2.56
ABR-225ENST00000574139 CEP170Q5SW79 1584 aa30.96■■■□□ 2.55
ABR-225ENST00000574139 NUP160Q12769 1436 aa30.94■■■□□ 2.54
ABR-225ENST00000574139 KIF27Q86VH2 1401 aa30.9■■■□□ 2.54
ABR-225ENST00000574139 IGF1RP08069 1367 aa30.84■■■□□ 2.53
ABR-225ENST00000574139 ERCC6L2Q5T890 1561 aa30.79■■■□□ 2.52
ABR-225ENST00000574139 CUL7Q14999 1698 aa30.77■■■□□ 2.52
ABR-225ENST00000574139 SHROOM2Q13796 1616 aa30.76■■■□□ 2.51
ABR-225ENST00000574139 RUSC2Q8N2Y8 1516 aa30.69■■■□□ 2.5
ABR-225ENST00000574139 CARMIL1Q5VZK9 1371 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms