RNA–Protein interactions for RNA: ENST00000574137.1

NUBP1-206, Transcript of nucleotide binding protein 1, humanhuman

TSL 1 (best)

Gene NUBP1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1-206ENST00000574137 NISCHQ9Y2I1 1504 aa33.61■■■□□ 2.97
NUBP1-206ENST00000574137 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
NUBP1-206ENST00000574137 ABCC9O60706 1549 aa29.92■■■□□ 2.38
NUBP1-206ENST00000574137 RB1CC1Q8TDY2 1594 aa28.52■■■□□ 2.16
NUBP1-206ENST00000574137 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
NUBP1-206ENST00000574137 NACADO15069 1562 aa28.37■■■□□ 2.13
NUBP1-206ENST00000574137 MYO15BQ96JP2 1530 aa28■■■□□ 2.07
NUBP1-206ENST00000574137 PABPN1Q86U42 306 aaKnown RBP eCLIP27.95■■■□□ 2.06
NUBP1-206ENST00000574137 ZCCHC6Q5VYS8 1495 aaKnown RBP27.88■■■□□ 2.05
NUBP1-206ENST00000574137 DNAJC5BQ9UF47 199 aa27.87■■■□□ 2.05
NUBP1-206ENST00000574137 UNC13AQ9UPW8 1703 aa27.82■■■□□ 2.04
NUBP1-206ENST00000574137 DCAF1Q9Y4B6 1507 aa27.73■■■□□ 2.03
NUBP1-206ENST00000574137 BICRAQ9NZM4 1560 aa27.63■■■□□ 2.01
NUBP1-206ENST00000574137 SCRIBQ14160 1630 aa27.44■■□□□ 1.98
NUBP1-206ENST00000574137 SHROOM4Q9ULL8 1493 aa27.28■■□□□ 1.96
NUBP1-206ENST00000574137 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
NUBP1-206ENST00000574137 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
NUBP1-206ENST00000574137 CECR2Q9BXF3 1484 aa26.92■■□□□ 1.9
NUBP1-206ENST00000574137 NCAPD3P42695 1498 aa26.19■■□□□ 1.78
NUBP1-206ENST00000574137 SMARCA4P51532 1647 aa26.16■■□□□ 1.78
NUBP1-206ENST00000574137 ATAD2BQ9ULI0 1458 aa26.16■■□□□ 1.78
NUBP1-206ENST00000574137 SMARCA2P51531 1590 aa26.09■■□□□ 1.77
NUBP1-206ENST00000574137 BAZ1AQ9NRL2 1556 aaPredicted RBP26.08■■□□□ 1.77
NUBP1-206ENST00000574137 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
NUBP1-206ENST00000574137 BAZ1BQ9UIG0 1483 aaKnown RBP25.94■■□□□ 1.74
NUBP1-206ENST00000574137 MROH2BQ7Z745 1585 aa25.91■■□□□ 1.74
NUBP1-206ENST00000574137 PEG3Q9GZU2 1588 aa25.86■■□□□ 1.73
NUBP1-206ENST00000574137 ERCC6Q03468 1493 aa25.85■■□□□ 1.73
NUBP1-206ENST00000574137 NESP48681 1621 aa25.74■■□□□ 1.71
NUBP1-206ENST00000574137 CUX2O14529 1486 aa25.66■■□□□ 1.7
NUBP1-206ENST00000574137 WIZO95785 1651 aa25.61■■□□□ 1.69
NUBP1-206ENST00000574137 LAMC3Q9Y6N6 1575 aa25.56■■□□□ 1.68
NUBP1-206ENST00000574137 PDS5BQ9NTI5 1447 aa25.47■■□□□ 1.67
NUBP1-206ENST00000574137 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
NUBP1-206ENST00000574137 CADPSQ9ULU8 1353 aa25.45■■□□□ 1.67
NUBP1-206ENST00000574137 DNAJC5Q9H3Z4 198 aa25.45■■□□□ 1.66
NUBP1-206ENST00000574137 KIF21AQ7Z4S6 1674 aa25.37■■□□□ 1.65
NUBP1-206ENST00000574137 THOC2Q8NI27 1593 aaKnown RBP25.36■■□□□ 1.65
NUBP1-206ENST00000574137 TOP2AP11388 1531 aaKnown RBP25.29■■□□□ 1.64
NUBP1-206ENST00000574137 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
NUBP1-206ENST00000574137 CFTRP13569 1480 aa25.16■■□□□ 1.62
NUBP1-206ENST00000574137 CEP164Q9UPV0 1460 aa25.16■■□□□ 1.62
NUBP1-206ENST00000574137 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
NUBP1-206ENST00000574137 WDR62O43379 1518 aa25.09■■□□□ 1.61
NUBP1-206ENST00000574137 CCDC88BA6NC98 1476 aa25.03■■□□□ 1.6
NUBP1-206ENST00000574137 URB2Q14146 1524 aaKnown RBP24.9■■□□□ 1.58
NUBP1-206ENST00000574137 PRDM2Q13029 1718 aa24.88■■□□□ 1.57
NUBP1-206ENST00000574137 TOPBP1Q92547 1522 aa24.69■■□□□ 1.54
NUBP1-206ENST00000574137 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
NUBP1-206ENST00000574137 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
NUBP1-206ENST00000574137 IFT140Q96RY7 1462 aa24.64■■□□□ 1.54
NUBP1-206ENST00000574137 OSCARQ8IYS5 282 aa24.61■■□□□ 1.53
NUBP1-206ENST00000574137 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
NUBP1-206ENST00000574137 ZNF608Q9ULD9 1512 aaPredicted RBP24.58■■□□□ 1.53
NUBP1-206ENST00000574137 TRIM41Q8WV44 630 aa24.52■■□□□ 1.52
NUBP1-206ENST00000574137 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.5
NUBP1-206ENST00000574137 AQRO60306 1485 aaKnown RBP eCLIP24.42■■□□□ 1.5
NUBP1-206ENST00000574137 EIF4G3O43432 1585 aaKnown RBP24.42■■□□□ 1.5
NUBP1-206ENST00000574137 TARBP1Q13395 1621 aaKnown RBP24.4■■□□□ 1.5
NUBP1-206ENST00000574137 SOGA1O94964 1423 aa24.39■■□□□ 1.5
NUBP1-206ENST00000574137 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
NUBP1-206ENST00000574137 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
NUBP1-206ENST00000574137 CUX1P39880 1505 aa24.33■■□□□ 1.49
NUBP1-206ENST00000574137 TDRD9Q8NDG6 1382 aaKnown RBP24.32■■□□□ 1.48
NUBP1-206ENST00000574137 FBLN2P98095 1184 aa24.32■■□□□ 1.48
NUBP1-206ENST00000574137 CHD1O14646 1710 aa24.2■■□□□ 1.46
NUBP1-206ENST00000574137 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
NUBP1-206ENST00000574137 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
NUBP1-206ENST00000574137 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
NUBP1-206ENST00000574137 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
NUBP1-206ENST00000574137 SNAPC4Q5SXM2 1469 aa24.16■■□□□ 1.46
NUBP1-206ENST00000574137 CHMP7Q8WUX9 453 aaPredicted RBP24.14■■□□□ 1.45
NUBP1-206ENST00000574137 ARHGEF11O15085 1522 aa24.13■■□□□ 1.45
NUBP1-206ENST00000574137 GRIN2BQ13224 1484 aa24.13■■□□□ 1.45
NUBP1-206ENST00000574137 GAPVD1Q14C86 1478 aa24.08■■□□□ 1.45
NUBP1-206ENST00000574137 MAGI1Q96QZ7 1491 aaPredicted RBP24.08■■□□□ 1.45
NUBP1-206ENST00000574137 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
NUBP1-206ENST00000574137 WRNQ14191 1432 aaPredicted RBP eCLIP24.05■■□□□ 1.44
NUBP1-206ENST00000574137 CYB5RLQ6IPT4 315 aa24.05■■□□□ 1.44
NUBP1-206ENST00000574137 SYNJ2O15056 1496 aa24■■□□□ 1.43
NUBP1-206ENST00000574137 PBRM1Q86U86 1689 aa23.99■■□□□ 1.43
NUBP1-206ENST00000574137 TOP2BQ02880 1626 aa23.99■■□□□ 1.43
NUBP1-206ENST00000574137 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
NUBP1-206ENST00000574137 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
NUBP1-206ENST00000574137 BIVM-ERCC5R4GMW8 1640 aa23.96■■□□□ 1.43
NUBP1-206ENST00000574137 CLASP1Q7Z460 1538 aa23.91■■□□□ 1.42
NUBP1-206ENST00000574137 ARAP1Q96P48 1450 aa23.9■■□□□ 1.42
NUBP1-206ENST00000574137 GRIN2AQ12879 1464 aa23.8■■□□□ 1.4
NUBP1-206ENST00000574137 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
NUBP1-206ENST00000574137 FHAD1B1AJZ9 1412 aa23.77■■□□□ 1.4
NUBP1-206ENST00000574137 TRHP20396 242 aaPredicted RBP23.75■■□□□ 1.39
NUBP1-206ENST00000574137 ERICH3Q5RHP9 1530 aa23.74■■□□□ 1.39
NUBP1-206ENST00000574137 NUP160Q12769 1436 aa23.69■■□□□ 1.38
NUBP1-206ENST00000574137 CEP170Q5SW79 1584 aa23.68■■□□□ 1.38
NUBP1-206ENST00000574137 KIF27Q86VH2 1401 aa23.59■■□□□ 1.37
NUBP1-206ENST00000574137 ERCC6L2Q5T890 1561 aa23.58■■□□□ 1.37
NUBP1-206ENST00000574137 JPH4Q96JJ6 628 aa23.55■■□□□ 1.36
NUBP1-206ENST00000574137 IGF1RP08069 1367 aa23.54■■□□□ 1.36
NUBP1-206ENST00000574137 SHROOM2Q13796 1616 aa23.51■■□□□ 1.35
NUBP1-206ENST00000574137 PRG4Q92954 1404 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms