RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 NISCHQ9Y2I1 1504 aa41.54■■■■■ 4.24
CLDN7-207ENST00000574070 CCDC180Q9P1Z9 1646 aa36.85■■■■□ 3.49
CLDN7-207ENST00000574070 ABCC9O60706 1549 aa36.67■■■■□ 3.46
CLDN7-207ENST00000574070 DCAF8L2P0C7V8 631 aa34.89■■■■□ 3.18
CLDN7-207ENST00000574070 DNAJC5BQ9UF47 199 aa34.79■■■■□ 3.16
CLDN7-207ENST00000574070 RB1CC1Q8TDY2 1594 aa34.74■■■■□ 3.15
CLDN7-207ENST00000574070 NACADO15069 1562 aa34.66■■■■□ 3.14
CLDN7-207ENST00000574070 ZCCHC6Q5VYS8 1495 aaKnown RBP34.61■■■■□ 3.13
CLDN7-207ENST00000574070 MYO15BQ96JP2 1530 aa34.4■■■■□ 3.1
CLDN7-207ENST00000574070 DCAF1Q9Y4B6 1507 aa34.31■■■■□ 3.08
CLDN7-207ENST00000574070 PABPN1Q86U42 306 aaKnown RBP eCLIP34.02■■■■□ 3.04
CLDN7-207ENST00000574070 UNC13AQ9UPW8 1703 aa33.93■■■■□ 3.02
CLDN7-207ENST00000574070 SCRIBQ14160 1630 aa33.73■■■□□ 2.99
CLDN7-207ENST00000574070 BICRAQ9NZM4 1560 aa33.64■■■□□ 2.98
CLDN7-207ENST00000574070 SHROOM4Q9ULL8 1493 aa33.25■■■□□ 2.91
CLDN7-207ENST00000574070 CC2D2AQ9P2K1 1620 aa33.12■■■□□ 2.89
CLDN7-207ENST00000574070 CECR2Q9BXF3 1484 aa33.12■■■□□ 2.89
CLDN7-207ENST00000574070 EIF4G1Q04637 1599 aaKnown RBP32.92■■■□□ 2.86
CLDN7-207ENST00000574070 DNAJC5Q9H3Z4 198 aa32.46■■■□□ 2.79
CLDN7-207ENST00000574070 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
CLDN7-207ENST00000574070 BAZ1AQ9NRL2 1556 aaPredicted RBP32.2■■■□□ 2.75
CLDN7-207ENST00000574070 ATAD2BQ9ULI0 1458 aa32.03■■■□□ 2.72
CLDN7-207ENST00000574070 MROH2BQ7Z745 1585 aa32.02■■■□□ 2.72
CLDN7-207ENST00000574070 SMARCA2P51531 1590 aa31.99■■■□□ 2.71
CLDN7-207ENST00000574070 NCAPD3P42695 1498 aa31.97■■■□□ 2.71
CLDN7-207ENST00000574070 CUX2O14529 1486 aa31.9■■■□□ 2.7
CLDN7-207ENST00000574070 PEG3Q9GZU2 1588 aa31.84■■■□□ 2.69
CLDN7-207ENST00000574070 HMGXB3Q12766 1538 aa31.81■■■□□ 2.68
CLDN7-207ENST00000574070 BAZ1BQ9UIG0 1483 aaKnown RBP31.81■■■□□ 2.68
CLDN7-207ENST00000574070 ERCC6Q03468 1493 aa31.78■■■□□ 2.68
CLDN7-207ENST00000574070 WIZO95785 1651 aa31.7■■■□□ 2.67
CLDN7-207ENST00000574070 RSF1Q96T23 1441 aaPredicted RBP31.69■■■□□ 2.66
CLDN7-207ENST00000574070 TOP2AP11388 1531 aaKnown RBP31.36■■■□□ 2.61
CLDN7-207ENST00000574070 NESP48681 1621 aa31.31■■■□□ 2.6
CLDN7-207ENST00000574070 THOC2Q8NI27 1593 aaKnown RBP31.15■■■□□ 2.58
CLDN7-207ENST00000574070 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
CLDN7-207ENST00000574070 SUPT5HO00267 1087 aaKnown RBP31.11■■■□□ 2.57
CLDN7-207ENST00000574070 CADPSQ9ULU8 1353 aa31.09■■■□□ 2.57
CLDN7-207ENST00000574070 CCDC88BA6NC98 1476 aa31■■■□□ 2.55
CLDN7-207ENST00000574070 PDS5BQ9NTI5 1447 aa30.97■■■□□ 2.55
CLDN7-207ENST00000574070 KIF21AQ7Z4S6 1674 aa30.97■■■□□ 2.55
CLDN7-207ENST00000574070 CFTRP13569 1480 aa30.89■■■□□ 2.53
CLDN7-207ENST00000574070 TRIM41Q8WV44 630 aa30.83■■■□□ 2.53
CLDN7-207ENST00000574070 FANCD2Q9BXW9 1451 aa30.75■■■□□ 2.51
CLDN7-207ENST00000574070 CEP164Q9UPV0 1460 aa30.71■■■□□ 2.51
CLDN7-207ENST00000574070 MRC2Q9UBG0 1479 aa30.68■■■□□ 2.5
CLDN7-207ENST00000574070 PRDM2Q13029 1718 aa30.64■■■□□ 2.5
CLDN7-207ENST00000574070 WDR62O43379 1518 aa30.61■■■□□ 2.49
CLDN7-207ENST00000574070 URB2Q14146 1524 aaKnown RBP30.4■■■□□ 2.46
CLDN7-207ENST00000574070 OSCARQ8IYS5 282 aa30.33■■■□□ 2.45
CLDN7-207ENST00000574070 ABCC8Q09428 1581 aa30.25■■■□□ 2.43
CLDN7-207ENST00000574070 TOPBP1Q92547 1522 aa30.24■■■□□ 2.43
CLDN7-207ENST00000574070 DNMBPQ6XZF7 1577 aa30.21■■■□□ 2.43
CLDN7-207ENST00000574070 IFT140Q96RY7 1462 aa30.05■■■□□ 2.4
CLDN7-207ENST00000574070 CUX1P39880 1505 aa30.04■■■□□ 2.4
CLDN7-207ENST00000574070 POLA1P09884 1462 aaPredicted RBP29.99■■■□□ 2.39
CLDN7-207ENST00000574070 RIMBP3CA6NJZ7 1639 aa29.99■■■□□ 2.39
CLDN7-207ENST00000574070 RIMBP3BA6NNM3 1639 aa29.99■■■□□ 2.39
CLDN7-207ENST00000574070 RIMBP3Q9UFD9 1639 aa29.99■■■□□ 2.39
CLDN7-207ENST00000574070 FGD5Q6ZNL6 1462 aa29.96■■■□□ 2.39
CLDN7-207ENST00000574070 WRNQ14191 1432 aaPredicted RBP eCLIP29.92■■■□□ 2.38
CLDN7-207ENST00000574070 SOGA1O94964 1423 aa29.91■■■□□ 2.38
CLDN7-207ENST00000574070 RAD54L2Q9Y4B4 1467 aa29.9■■■□□ 2.38
CLDN7-207ENST00000574070 ZNF608Q9ULD9 1512 aaPredicted RBP29.9■■■□□ 2.38
CLDN7-207ENST00000574070 TARBP1Q13395 1621 aaKnown RBP29.86■■■□□ 2.37
CLDN7-207ENST00000574070 ARHGEF11O15085 1522 aa29.83■■■□□ 2.37
CLDN7-207ENST00000574070 SYNJ1O43426 1573 aa29.81■■■□□ 2.36
CLDN7-207ENST00000574070 TOP2BQ02880 1626 aa29.79■■■□□ 2.36
CLDN7-207ENST00000574070 BIVM-ERCC5R4GMW8 1640 aa29.78■■■□□ 2.36
CLDN7-207ENST00000574070 EIF4G3O43432 1585 aaKnown RBP29.77■■■□□ 2.36
CLDN7-207ENST00000574070 AQRO60306 1485 aaKnown RBP eCLIP29.77■■■□□ 2.36
CLDN7-207ENST00000574070 TDRD9Q8NDG6 1382 aaKnown RBP29.74■■■□□ 2.35
CLDN7-207ENST00000574070 WDR97A6NE52 1622 aa29.63■■■□□ 2.33
CLDN7-207ENST00000574070 ABCA10Q8WWZ4 1543 aa29.63■■■□□ 2.33
CLDN7-207ENST00000574070 CYB5RLQ6IPT4 315 aa29.63■■■□□ 2.33
CLDN7-207ENST00000574070 CHD1O14646 1710 aa29.59■■■□□ 2.33
CLDN7-207ENST00000574070 GAPVD1Q14C86 1478 aa29.55■■■□□ 2.32
CLDN7-207ENST00000574070 TRHP20396 242 aaPredicted RBP29.54■■■□□ 2.32
CLDN7-207ENST00000574070 GRIN2BQ13224 1484 aa29.53■■■□□ 2.32
CLDN7-207ENST00000574070 FBLN2P98095 1184 aa29.51■■■□□ 2.31
CLDN7-207ENST00000574070 SNAPC4Q5SXM2 1469 aa29.49■■■□□ 2.31
CLDN7-207ENST00000574070 ABCA5Q8WWZ7 1642 aa29.49■■■□□ 2.31
CLDN7-207ENST00000574070 ARAP1Q96P48 1450 aa29.47■■■□□ 2.31
CLDN7-207ENST00000574070 PBRM1Q86U86 1689 aa29.47■■■□□ 2.31
CLDN7-207ENST00000574070 MAGI1Q96QZ7 1491 aaPredicted RBP29.42■■■□□ 2.3
CLDN7-207ENST00000574070 CHMP7Q8WUX9 453 aaPredicted RBP29.4■■■□□ 2.3
CLDN7-207ENST00000574070 SYNJ2O15056 1496 aa29.32■■■□□ 2.28
CLDN7-207ENST00000574070 KIF27Q86VH2 1401 aa29.3■■■□□ 2.28
CLDN7-207ENST00000574070 ERICH3Q5RHP9 1530 aa29.28■■■□□ 2.28
CLDN7-207ENST00000574070 ADAMTS12P58397 1594 aa29.22■■■□□ 2.27
CLDN7-207ENST00000574070 FHAD1B1AJZ9 1412 aa29.21■■■□□ 2.27
CLDN7-207ENST00000574070 CLASP1Q7Z460 1538 aa29.18■■■□□ 2.26
CLDN7-207ENST00000574070 AEBP2Q6ZN18 517 aaPredicted RBP29.14■■■□□ 2.26
CLDN7-207ENST00000574070 GRIN2AQ12879 1464 aa29.14■■■□□ 2.26
CLDN7-207ENST00000574070 IGF1RP08069 1367 aa29.13■■■□□ 2.25
CLDN7-207ENST00000574070 CUL7Q14999 1698 aa29.05■■■□□ 2.24
CLDN7-207ENST00000574070 RUSC2Q8N2Y8 1516 aa29.04■■■□□ 2.24
CLDN7-207ENST00000574070 CARMIL1Q5VZK9 1371 aa29.01■■■□□ 2.23
CLDN7-207ENST00000574070 CHIC1Q5VXU3 224 aa29■■■□□ 2.23
CLDN7-207ENST00000574070 CEP170Q5SW79 1584 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms