RNA–Protein interactions for RNA: ENST00000574011.1

RPH3AL-213, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 5

Gene RPH3AL, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-213ENST00000574011 NISCHQ9Y2I1 1504 aa27.99■■■□□ 2.07
RPH3AL-213ENST00000574011 ABCC9O60706 1549 aa25.73■■□□□ 1.71
RPH3AL-213ENST00000574011 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
RPH3AL-213ENST00000574011 DNAJC5BQ9UF47 199 aa24.53■■□□□ 1.52
RPH3AL-213ENST00000574011 RB1CC1Q8TDY2 1594 aa24.25■■□□□ 1.47
RPH3AL-213ENST00000574011 NACADO15069 1562 aa23.97■■□□□ 1.43
RPH3AL-213ENST00000574011 PABPN1Q86U42 306 aaKnown RBP eCLIP23.95■■□□□ 1.42
RPH3AL-213ENST00000574011 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
RPH3AL-213ENST00000574011 UNC13AQ9UPW8 1703 aa23.73■■□□□ 1.39
RPH3AL-213ENST00000574011 BICRAQ9NZM4 1560 aa23.58■■□□□ 1.37
RPH3AL-213ENST00000574011 MYO15BQ96JP2 1530 aa23.46■■□□□ 1.35
RPH3AL-213ENST00000574011 CECR2Q9BXF3 1484 aa23.2■■□□□ 1.3
RPH3AL-213ENST00000574011 CC2D2AQ9P2K1 1620 aa23.19■■□□□ 1.3
RPH3AL-213ENST00000574011 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
RPH3AL-213ENST00000574011 ZCCHC6Q5VYS8 1495 aaKnown RBP23.1■■□□□ 1.29
RPH3AL-213ENST00000574011 SCRIBQ14160 1630 aa23.07■■□□□ 1.28
RPH3AL-213ENST00000574011 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
RPH3AL-213ENST00000574011 EIF4G1Q04637 1599 aaKnown RBP23.03■■□□□ 1.28
RPH3AL-213ENST00000574011 DNAJC5Q9H3Z4 198 aa22.76■■□□□ 1.23
RPH3AL-213ENST00000574011 CUX2O14529 1486 aa22.27■■□□□ 1.16
RPH3AL-213ENST00000574011 ERCC6Q03468 1493 aa22.23■■□□□ 1.15
RPH3AL-213ENST00000574011 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
RPH3AL-213ENST00000574011 ATAD2BQ9ULI0 1458 aa22.05■■□□□ 1.12
RPH3AL-213ENST00000574011 NESP48681 1621 aa22■■□□□ 1.11
RPH3AL-213ENST00000574011 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
RPH3AL-213ENST00000574011 HMGXB3Q12766 1538 aa21.93■■□□□ 1.1
RPH3AL-213ENST00000574011 SMARCA4P51532 1647 aa21.92■■□□□ 1.1
RPH3AL-213ENST00000574011 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
RPH3AL-213ENST00000574011 THOC2Q8NI27 1593 aaKnown RBP21.79■■□□□ 1.08
RPH3AL-213ENST00000574011 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
RPH3AL-213ENST00000574011 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
RPH3AL-213ENST00000574011 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
RPH3AL-213ENST00000574011 KIF21AQ7Z4S6 1674 aa21.67■■□□□ 1.06
RPH3AL-213ENST00000574011 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
RPH3AL-213ENST00000574011 PDS5BQ9NTI5 1447 aa21.62■■□□□ 1.05
RPH3AL-213ENST00000574011 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
RPH3AL-213ENST00000574011 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
RPH3AL-213ENST00000574011 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.03
RPH3AL-213ENST00000574011 WDR62O43379 1518 aa21.39■■□□□ 1.02
RPH3AL-213ENST00000574011 WIZO95785 1651 aa21.32■■□□□ 1
RPH3AL-213ENST00000574011 CEP164Q9UPV0 1460 aa21.3■■□□□ 1
RPH3AL-213ENST00000574011 FANCD2Q9BXW9 1451 aa21.25■□□□□ 0.99
RPH3AL-213ENST00000574011 OSCARQ8IYS5 282 aa21.24■□□□□ 0.99
RPH3AL-213ENST00000574011 CFTRP13569 1480 aa21.13■□□□□ 0.97
RPH3AL-213ENST00000574011 URB2Q14146 1524 aaKnown RBP21.11■□□□□ 0.97
RPH3AL-213ENST00000574011 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
RPH3AL-213ENST00000574011 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
RPH3AL-213ENST00000574011 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
RPH3AL-213ENST00000574011 RSF1Q96T23 1441 aaPredicted RBP21■□□□□ 0.95
RPH3AL-213ENST00000574011 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
RPH3AL-213ENST00000574011 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
RPH3AL-213ENST00000574011 ARHGEF11O15085 1522 aa20.88■□□□□ 0.93
RPH3AL-213ENST00000574011 IFT140Q96RY7 1462 aa20.88■□□□□ 0.93
RPH3AL-213ENST00000574011 PRDM2Q13029 1718 aa20.87■□□□□ 0.93
RPH3AL-213ENST00000574011 CYB5RLQ6IPT4 315 aa20.82■□□□□ 0.92
RPH3AL-213ENST00000574011 TOPBP1Q92547 1522 aa20.79■□□□□ 0.92
RPH3AL-213ENST00000574011 CCDC88BA6NC98 1476 aa20.79■□□□□ 0.92
RPH3AL-213ENST00000574011 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
RPH3AL-213ENST00000574011 TRHP20396 242 aaPredicted RBP20.73■□□□□ 0.91
RPH3AL-213ENST00000574011 AQRO60306 1485 aaKnown RBP eCLIP20.7■□□□□ 0.9
RPH3AL-213ENST00000574011 CHD1O14646 1710 aa20.7■□□□□ 0.9
RPH3AL-213ENST00000574011 FBLN2P98095 1184 aa20.69■□□□□ 0.9
RPH3AL-213ENST00000574011 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
RPH3AL-213ENST00000574011 DNMBPQ6XZF7 1577 aa20.67■□□□□ 0.9
RPH3AL-213ENST00000574011 ARAP1Q96P48 1450 aa20.66■□□□□ 0.9
RPH3AL-213ENST00000574011 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.89
RPH3AL-213ENST00000574011 POLA1P09884 1462 aaPredicted RBP20.56■□□□□ 0.88
RPH3AL-213ENST00000574011 RAD54L2Q9Y4B4 1467 aa20.54■□□□□ 0.88
RPH3AL-213ENST00000574011 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
RPH3AL-213ENST00000574011 SOGA1O94964 1423 aa20.48■□□□□ 0.87
RPH3AL-213ENST00000574011 SNAPC4Q5SXM2 1469 aa20.46■□□□□ 0.87
RPH3AL-213ENST00000574011 CHMP7Q8WUX9 453 aaPredicted RBP20.43■□□□□ 0.86
RPH3AL-213ENST00000574011 CLASP1Q7Z460 1538 aa20.42■□□□□ 0.86
RPH3AL-213ENST00000574011 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
RPH3AL-213ENST00000574011 FGD5Q6ZNL6 1462 aa20.38■□□□□ 0.85
RPH3AL-213ENST00000574011 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
RPH3AL-213ENST00000574011 MAGI1Q96QZ7 1491 aaPredicted RBP20.34■□□□□ 0.85
RPH3AL-213ENST00000574011 WDR97A6NE52 1622 aa20.33■□□□□ 0.84
RPH3AL-213ENST00000574011 GRIN2BQ13224 1484 aa20.32■□□□□ 0.84
RPH3AL-213ENST00000574011 CUX1P39880 1505 aa20.31■□□□□ 0.84
RPH3AL-213ENST00000574011 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
RPH3AL-213ENST00000574011 GAPVD1Q14C86 1478 aa20.26■□□□□ 0.83
RPH3AL-213ENST00000574011 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
RPH3AL-213ENST00000574011 ERCC6L2Q5T890 1561 aa20.13■□□□□ 0.81
RPH3AL-213ENST00000574011 ABCA5Q8WWZ7 1642 aa20.11■□□□□ 0.81
RPH3AL-213ENST00000574011 ABCA10Q8WWZ4 1543 aa20.1■□□□□ 0.81
RPH3AL-213ENST00000574011 GRIN2AQ12879 1464 aa20.06■□□□□ 0.8
RPH3AL-213ENST00000574011 CEP170Q5SW79 1584 aa20.03■□□□□ 0.8
RPH3AL-213ENST00000574011 ADAMTS12P58397 1594 aa20■□□□□ 0.79
RPH3AL-213ENST00000574011 NUP160Q12769 1436 aa19.99■□□□□ 0.79
RPH3AL-213ENST00000574011 WRNQ14191 1432 aaPredicted RBP eCLIP19.96■□□□□ 0.79
RPH3AL-213ENST00000574011 SHROOM2Q13796 1616 aa19.94■□□□□ 0.78
RPH3AL-213ENST00000574011 FHAD1B1AJZ9 1412 aa19.93■□□□□ 0.78
RPH3AL-213ENST00000574011 KIF13AQ9H1H9 1805 aa19.92■□□□□ 0.78
RPH3AL-213ENST00000574011 PRG4Q92954 1404 aaPredicted RBP19.88■□□□□ 0.77
RPH3AL-213ENST00000574011 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
RPH3AL-213ENST00000574011 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
RPH3AL-213ENST00000574011 BIVM-ERCC5R4GMW8 1640 aa19.84■□□□□ 0.77
RPH3AL-213ENST00000574011 JPH4Q96JJ6 628 aa19.84■□□□□ 0.77
RPH3AL-213ENST00000574011 ERICH3Q5RHP9 1530 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms