RNA–Protein interactions for RNA: ENST00000573990.1

SPNS2-207, Transcript of sphingolipid transporter 2, humanhuman

TSL 3

Gene SPNS2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-207ENST00000573990 NISCHQ9Y2I1 1504 aa47.75■■■■■ 5.23
SPNS2-207ENST00000573990 CCDC180Q9P1Z9 1646 aa42.49■■■■■ 4.39
SPNS2-207ENST00000573990 ABCC9O60706 1549 aa42.08■■■■■ 4.33
SPNS2-207ENST00000573990 RB1CC1Q8TDY2 1594 aa40.2■■■■■ 4.03
SPNS2-207ENST00000573990 DCAF8L2P0C7V8 631 aa40.2■■■■■ 4.03
SPNS2-207ENST00000573990 NACADO15069 1562 aa40.06■■■■■ 4
SPNS2-207ENST00000573990 ZCCHC6Q5VYS8 1495 aaKnown RBP39.67■■■■□ 3.94
SPNS2-207ENST00000573990 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
SPNS2-207ENST00000573990 DCAF1Q9Y4B6 1507 aa39.39■■■■□ 3.9
SPNS2-207ENST00000573990 PABPN1Q86U42 306 aaKnown RBP eCLIP39.35■■■■□ 3.89
SPNS2-207ENST00000573990 UNC13AQ9UPW8 1703 aa39.34■■■■□ 3.89
SPNS2-207ENST00000573990 BICRAQ9NZM4 1560 aa39.08■■■■□ 3.85
SPNS2-207ENST00000573990 DNAJC5BQ9UF47 199 aa39.03■■■■□ 3.84
SPNS2-207ENST00000573990 SCRIBQ14160 1630 aa38.88■■■■□ 3.81
SPNS2-207ENST00000573990 SHROOM4Q9ULL8 1493 aa38.43■■■■□ 3.74
SPNS2-207ENST00000573990 EIF4G1Q04637 1599 aaKnown RBP38.03■■■■□ 3.68
SPNS2-207ENST00000573990 CC2D2AQ9P2K1 1620 aa37.98■■■■□ 3.67
SPNS2-207ENST00000573990 CECR2Q9BXF3 1484 aa37.79■■■■□ 3.64
SPNS2-207ENST00000573990 SMARCA4P51532 1647 aa37.1■■■■□ 3.53
SPNS2-207ENST00000573990 NCAPD3P42695 1498 aa37.01■■■■□ 3.52
SPNS2-207ENST00000573990 ATAD2BQ9ULI0 1458 aa37.01■■■■□ 3.52
SPNS2-207ENST00000573990 BAZ1AQ9NRL2 1556 aaPredicted RBP36.98■■■■□ 3.51
SPNS2-207ENST00000573990 SMARCA2P51531 1590 aa36.88■■■■□ 3.49
SPNS2-207ENST00000573990 MROH2BQ7Z745 1585 aa36.85■■■■□ 3.49
SPNS2-207ENST00000573990 HMGXB3Q12766 1538 aa36.75■■■■□ 3.47
SPNS2-207ENST00000573990 PEG3Q9GZU2 1588 aa36.69■■■■□ 3.46
SPNS2-207ENST00000573990 BAZ1BQ9UIG0 1483 aaKnown RBP36.67■■■■□ 3.46
SPNS2-207ENST00000573990 WIZO95785 1651 aa36.44■■■■□ 3.42
SPNS2-207ENST00000573990 NESP48681 1621 aa36.34■■■■□ 3.41
SPNS2-207ENST00000573990 RSF1Q96T23 1441 aaPredicted RBP36.29■■■■□ 3.4
SPNS2-207ENST00000573990 ERCC6Q03468 1493 aa36.23■■■■□ 3.39
SPNS2-207ENST00000573990 LAMC3Q9Y6N6 1575 aa36.05■■■■□ 3.36
SPNS2-207ENST00000573990 TOP2AP11388 1531 aaKnown RBP35.95■■■■□ 3.35
SPNS2-207ENST00000573990 CADPSQ9ULU8 1353 aa35.94■■■■□ 3.34
SPNS2-207ENST00000573990 CUX2O14529 1486 aa35.9■■■■□ 3.34
SPNS2-207ENST00000573990 PDS5BQ9NTI5 1447 aa35.84■■■■□ 3.33
SPNS2-207ENST00000573990 KIF21AQ7Z4S6 1674 aa35.81■■■■□ 3.32
SPNS2-207ENST00000573990 THOC2Q8NI27 1593 aaKnown RBP35.75■■■■□ 3.31
SPNS2-207ENST00000573990 CFTRP13569 1480 aa35.64■■■■□ 3.3
SPNS2-207ENST00000573990 CCDC88BA6NC98 1476 aa35.6■■■■□ 3.29
SPNS2-207ENST00000573990 FANCD2Q9BXW9 1451 aa35.54■■■■□ 3.28
SPNS2-207ENST00000573990 MRC2Q9UBG0 1479 aa35.51■■■■□ 3.28
SPNS2-207ENST00000573990 CEP164Q9UPV0 1460 aa35.48■■■■□ 3.27
SPNS2-207ENST00000573990 WDR62O43379 1518 aa35.39■■■■□ 3.26
SPNS2-207ENST00000573990 DNAJC5Q9H3Z4 198 aa35.3■■■■□ 3.24
SPNS2-207ENST00000573990 PRDM2Q13029 1718 aa35.26■■■■□ 3.23
SPNS2-207ENST00000573990 SUPT5HO00267 1087 aaKnown RBP35.25■■■■□ 3.23
SPNS2-207ENST00000573990 URB2Q14146 1524 aaKnown RBP35.22■■■■□ 3.23
SPNS2-207ENST00000573990 TOPBP1Q92547 1522 aa34.93■■■■□ 3.18
SPNS2-207ENST00000573990 ABCC8Q09428 1581 aa34.82■■■■□ 3.16
SPNS2-207ENST00000573990 DNMBPQ6XZF7 1577 aa34.82■■■■□ 3.16
SPNS2-207ENST00000573990 IFT140Q96RY7 1462 aa34.76■■■■□ 3.15
SPNS2-207ENST00000573990 ZNF608Q9ULD9 1512 aaPredicted RBP34.72■■■■□ 3.15
SPNS2-207ENST00000573990 POLA1P09884 1462 aaPredicted RBP34.61■■■■□ 3.13
SPNS2-207ENST00000573990 TARBP1Q13395 1621 aaKnown RBP34.57■■■■□ 3.12
SPNS2-207ENST00000573990 CUX1P39880 1505 aa34.56■■■■□ 3.12
SPNS2-207ENST00000573990 RAD54L2Q9Y4B4 1467 aa34.54■■■■□ 3.12
SPNS2-207ENST00000573990 SOGA1O94964 1423 aa34.5■■■■□ 3.11
SPNS2-207ENST00000573990 AQRO60306 1485 aaKnown RBP eCLIP34.5■■■■□ 3.11
SPNS2-207ENST00000573990 FGD5Q6ZNL6 1462 aa34.49■■■■□ 3.11
SPNS2-207ENST00000573990 EIF4G3O43432 1585 aaKnown RBP34.49■■■■□ 3.11
SPNS2-207ENST00000573990 OSCARQ8IYS5 282 aa34.45■■■■□ 3.11
SPNS2-207ENST00000573990 TDRD9Q8NDG6 1382 aaKnown RBP34.39■■■■□ 3.1
SPNS2-207ENST00000573990 WRNQ14191 1432 aaPredicted RBP eCLIP34.2■■■■□ 3.06
SPNS2-207ENST00000573990 FBLN2P98095 1184 aa34.18■■■■□ 3.06
SPNS2-207ENST00000573990 WDR97A6NE52 1622 aa34.16■■■■□ 3.06
SPNS2-207ENST00000573990 SYNJ1O43426 1573 aa34.16■■■■□ 3.06
SPNS2-207ENST00000573990 CHD1O14646 1710 aa34.14■■■■□ 3.06
SPNS2-207ENST00000573990 TOP2BQ02880 1626 aa34.12■■■■□ 3.05
SPNS2-207ENST00000573990 BIVM-ERCC5R4GMW8 1640 aa34.12■■■■□ 3.05
SPNS2-207ENST00000573990 SNAPC4Q5SXM2 1469 aa34.11■■■■□ 3.05
SPNS2-207ENST00000573990 ABCA10Q8WWZ4 1543 aa34.1■■■■□ 3.05
SPNS2-207ENST00000573990 TRIM41Q8WV44 630 aa34.08■■■■□ 3.05
SPNS2-207ENST00000573990 GRIN2BQ13224 1484 aa34.07■■■■□ 3.05
SPNS2-207ENST00000573990 GAPVD1Q14C86 1478 aa34.06■■■■□ 3.04
SPNS2-207ENST00000573990 ABCA5Q8WWZ7 1642 aa33.99■■■■□ 3.03
SPNS2-207ENST00000573990 CHMP7Q8WUX9 453 aaPredicted RBP33.98■■■■□ 3.03
SPNS2-207ENST00000573990 MAGI1Q96QZ7 1491 aaPredicted RBP33.98■■■■□ 3.03
SPNS2-207ENST00000573990 PBRM1Q86U86 1689 aa33.97■■■■□ 3.03
SPNS2-207ENST00000573990 RIMBP3CA6NJZ7 1639 aa33.92■■■■□ 3.02
SPNS2-207ENST00000573990 RIMBP3BA6NNM3 1639 aa33.92■■■■□ 3.02
SPNS2-207ENST00000573990 RIMBP3Q9UFD9 1639 aa33.92■■■■□ 3.02
SPNS2-207ENST00000573990 SYNJ2O15056 1496 aa33.88■■■■□ 3.01
SPNS2-207ENST00000573990 ARHGEF11O15085 1522 aa33.86■■■■□ 3.01
SPNS2-207ENST00000573990 CLASP1Q7Z460 1538 aa33.74■■■□□ 2.99
SPNS2-207ENST00000573990 ADAMTS12P58397 1594 aa33.69■■■□□ 2.98
SPNS2-207ENST00000573990 CYB5RLQ6IPT4 315 aa33.67■■■□□ 2.98
SPNS2-207ENST00000573990 ERICH3Q5RHP9 1530 aa33.65■■■□□ 2.98
SPNS2-207ENST00000573990 GRIN2AQ12879 1464 aa33.64■■■□□ 2.98
SPNS2-207ENST00000573990 FHAD1B1AJZ9 1412 aa33.63■■■□□ 2.97
SPNS2-207ENST00000573990 ARAP1Q96P48 1450 aa33.59■■■□□ 2.97
SPNS2-207ENST00000573990 CEP170Q5SW79 1584 aa33.52■■■□□ 2.96
SPNS2-207ENST00000573990 NUP160Q12769 1436 aa33.5■■■□□ 2.95
SPNS2-207ENST00000573990 KIF27Q86VH2 1401 aa33.49■■■□□ 2.95
SPNS2-207ENST00000573990 IGF1RP08069 1367 aa33.47■■■□□ 2.95
SPNS2-207ENST00000573990 ERCC6L2Q5T890 1561 aa33.36■■■□□ 2.93
SPNS2-207ENST00000573990 SHROOM2Q13796 1616 aa33.27■■■□□ 2.92
SPNS2-207ENST00000573990 CUL7Q14999 1698 aa33.26■■■□□ 2.92
SPNS2-207ENST00000573990 RUSC2Q8N2Y8 1516 aa33.23■■■□□ 2.91
SPNS2-207ENST00000573990 CARMIL1Q5VZK9 1371 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms