RNA–Protein interactions for RNA: ENST00000573860.1

LINC01896-205, Transcript of long intergenic non-protein coding RNA 1896, humanhuman

TSL 3

Gene LINC01896, Length 423 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01896-205ENST00000573860 NISCHQ9Y2I1 1504 aa59.54■■■■■ 7.12
LINC01896-205ENST00000573860 CCDC180Q9P1Z9 1646 aa53.02■■■■■ 6.08
LINC01896-205ENST00000573860 ABCC9O60706 1549 aa51.8■■■■■ 5.88
LINC01896-205ENST00000573860 RB1CC1Q8TDY2 1594 aa49.89■■■■■ 5.58
LINC01896-205ENST00000573860 NACADO15069 1562 aa49.82■■■■■ 5.57
LINC01896-205ENST00000573860 DCAF8L2P0C7V8 631 aa49.75■■■■■ 5.55
LINC01896-205ENST00000573860 ZCCHC6Q5VYS8 1495 aaKnown RBP49.57■■■■■ 5.53
LINC01896-205ENST00000573860 MYO15BQ96JP2 1530 aa49.5■■■■■ 5.52
LINC01896-205ENST00000573860 DCAF1Q9Y4B6 1507 aa49.28■■■■■ 5.48
LINC01896-205ENST00000573860 UNC13AQ9UPW8 1703 aa48.79■■■■■ 5.4
LINC01896-205ENST00000573860 PABPN1Q86U42 306 aaKnown RBP eCLIP48.38■■■■■ 5.34
LINC01896-205ENST00000573860 BICRAQ9NZM4 1560 aa48.33■■■■■ 5.33
LINC01896-205ENST00000573860 SCRIBQ14160 1630 aa48.32■■■■■ 5.33
LINC01896-205ENST00000573860 SHROOM4Q9ULL8 1493 aa47.86■■■■■ 5.25
LINC01896-205ENST00000573860 DNAJC5BQ9UF47 199 aa47.59■■■■■ 5.21
LINC01896-205ENST00000573860 EIF4G1Q04637 1599 aaKnown RBP47.07■■■■■ 5.13
LINC01896-205ENST00000573860 CC2D2AQ9P2K1 1620 aa46.9■■■■■ 5.1
LINC01896-205ENST00000573860 CECR2Q9BXF3 1484 aa46.57■■■■■ 5.04
LINC01896-205ENST00000573860 SMARCA4P51532 1647 aa46.23■■■■■ 4.99
LINC01896-205ENST00000573860 BAZ1AQ9NRL2 1556 aaPredicted RBP46.17■■■■■ 4.98
LINC01896-205ENST00000573860 ATAD2BQ9ULI0 1458 aa45.94■■■■■ 4.95
LINC01896-205ENST00000573860 SMARCA2P51531 1590 aa45.94■■■■■ 4.94
LINC01896-205ENST00000573860 NCAPD3P42695 1498 aa45.93■■■■■ 4.94
LINC01896-205ENST00000573860 MROH2BQ7Z745 1585 aa45.86■■■■■ 4.93
LINC01896-205ENST00000573860 PEG3Q9GZU2 1588 aa45.77■■■■■ 4.92
LINC01896-205ENST00000573860 HMGXB3Q12766 1538 aa45.73■■■■■ 4.91
LINC01896-205ENST00000573860 BAZ1BQ9UIG0 1483 aaKnown RBP45.59■■■■■ 4.89
LINC01896-205ENST00000573860 WIZO95785 1651 aa45.4■■■■■ 4.86
LINC01896-205ENST00000573860 RSF1Q96T23 1441 aaPredicted RBP45.31■■■■■ 4.84
LINC01896-205ENST00000573860 TOP2AP11388 1531 aaKnown RBP44.92■■■■■ 4.78
LINC01896-205ENST00000573860 NESP48681 1621 aa44.81■■■■■ 4.76
LINC01896-205ENST00000573860 LAMC3Q9Y6N6 1575 aa44.77■■■■■ 4.76
LINC01896-205ENST00000573860 ERCC6Q03468 1493 aa44.7■■■■■ 4.75
LINC01896-205ENST00000573860 CADPSQ9ULU8 1353 aa44.58■■■■■ 4.73
LINC01896-205ENST00000573860 PDS5BQ9NTI5 1447 aa44.45■■■■■ 4.71
LINC01896-205ENST00000573860 CCDC88BA6NC98 1476 aa44.37■■■■■ 4.69
LINC01896-205ENST00000573860 KIF21AQ7Z4S6 1674 aa44.36■■■■■ 4.69
LINC01896-205ENST00000573860 CFTRP13569 1480 aa44.32■■■■■ 4.69
LINC01896-205ENST00000573860 CUX2O14529 1486 aa44.23■■■■■ 4.67
LINC01896-205ENST00000573860 THOC2Q8NI27 1593 aaKnown RBP44.18■■■■■ 4.66
LINC01896-205ENST00000573860 SUPT5HO00267 1087 aaKnown RBP44.17■■■■■ 4.66
LINC01896-205ENST00000573860 PRDM2Q13029 1718 aa44.1■■■■■ 4.65
LINC01896-205ENST00000573860 FANCD2Q9BXW9 1451 aa44.08■■■■■ 4.65
LINC01896-205ENST00000573860 CEP164Q9UPV0 1460 aa44.05■■■■■ 4.64
LINC01896-205ENST00000573860 MRC2Q9UBG0 1479 aa43.98■■■■■ 4.63
LINC01896-205ENST00000573860 WDR62O43379 1518 aa43.83■■■■■ 4.61
LINC01896-205ENST00000573860 URB2Q14146 1524 aaKnown RBP43.63■■■■■ 4.57
LINC01896-205ENST00000573860 DNAJC5Q9H3Z4 198 aa43.47■■■■■ 4.55
LINC01896-205ENST00000573860 ABCC8Q09428 1581 aa43.42■■■■■ 4.54
LINC01896-205ENST00000573860 TOPBP1Q92547 1522 aa43.38■■■■■ 4.53
LINC01896-205ENST00000573860 DNMBPQ6XZF7 1577 aa43.35■■■■■ 4.53
LINC01896-205ENST00000573860 IFT140Q96RY7 1462 aa43.13■■■■■ 4.49
LINC01896-205ENST00000573860 CUX1P39880 1505 aa43.02■■■■■ 4.48
LINC01896-205ENST00000573860 POLA1P09884 1462 aaPredicted RBP43■■■■■ 4.47
LINC01896-205ENST00000573860 TARBP1Q13395 1621 aaKnown RBP42.93■■■■■ 4.46
LINC01896-205ENST00000573860 FGD5Q6ZNL6 1462 aa42.9■■■■■ 4.46
LINC01896-205ENST00000573860 ZNF608Q9ULD9 1512 aaPredicted RBP42.88■■■■■ 4.46
LINC01896-205ENST00000573860 SOGA1O94964 1423 aa42.84■■■■■ 4.45
LINC01896-205ENST00000573860 RAD54L2Q9Y4B4 1467 aa42.8■■■■■ 4.44
LINC01896-205ENST00000573860 EIF4G3O43432 1585 aaKnown RBP42.78■■■■■ 4.44
LINC01896-205ENST00000573860 WRNQ14191 1432 aaPredicted RBP eCLIP42.76■■■■■ 4.44
LINC01896-205ENST00000573860 BIVM-ERCC5R4GMW8 1640 aa42.71■■■■■ 4.43
LINC01896-205ENST00000573860 TOP2BQ02880 1626 aa42.69■■■■■ 4.42
LINC01896-205ENST00000573860 AQRO60306 1485 aaKnown RBP eCLIP42.66■■■■■ 4.42
LINC01896-205ENST00000573860 SYNJ1O43426 1573 aa42.65■■■■■ 4.42
LINC01896-205ENST00000573860 WDR97A6NE52 1622 aa42.63■■■■■ 4.41
LINC01896-205ENST00000573860 TDRD9Q8NDG6 1382 aaKnown RBP42.56■■■■■ 4.4
LINC01896-205ENST00000573860 ABCA10Q8WWZ4 1543 aa42.49■■■■■ 4.39
LINC01896-205ENST00000573860 OSCARQ8IYS5 282 aa42.39■■■■■ 4.38
LINC01896-205ENST00000573860 GRIN2BQ13224 1484 aa42.35■■■■■ 4.37
LINC01896-205ENST00000573860 GAPVD1Q14C86 1478 aa42.35■■■■■ 4.37
LINC01896-205ENST00000573860 ABCA5Q8WWZ7 1642 aa42.34■■■■■ 4.37
LINC01896-205ENST00000573860 PBRM1Q86U86 1689 aa42.31■■■■■ 4.36
LINC01896-205ENST00000573860 CHD1O14646 1710 aa42.28■■■■■ 4.36
LINC01896-205ENST00000573860 SNAPC4Q5SXM2 1469 aa42.27■■■■■ 4.36
LINC01896-205ENST00000573860 MAGI1Q96QZ7 1491 aaPredicted RBP42.25■■■■■ 4.35
LINC01896-205ENST00000573860 FBLN2P98095 1184 aa42.18■■■■■ 4.34
LINC01896-205ENST00000573860 SYNJ2O15056 1496 aa42.07■■■■■ 4.33
LINC01896-205ENST00000573860 CHMP7Q8WUX9 453 aaPredicted RBP42.07■■■■■ 4.33
LINC01896-205ENST00000573860 ERICH3Q5RHP9 1530 aa42■■■■■ 4.31
LINC01896-205ENST00000573860 ADAMTS12P58397 1594 aa41.93■■■■■ 4.3
LINC01896-205ENST00000573860 KIF27Q86VH2 1401 aa41.89■■■■■ 4.3
LINC01896-205ENST00000573860 FHAD1B1AJZ9 1412 aa41.86■■■■■ 4.29
LINC01896-205ENST00000573860 GRIN2AQ12879 1464 aa41.8■■■■■ 4.28
LINC01896-205ENST00000573860 CLASP1Q7Z460 1538 aa41.76■■■■■ 4.28
LINC01896-205ENST00000573860 TRIM41Q8WV44 630 aa41.75■■■■■ 4.27
LINC01896-205ENST00000573860 RIMBP3CA6NJZ7 1639 aa41.73■■■■■ 4.27
LINC01896-205ENST00000573860 RIMBP3BA6NNM3 1639 aa41.73■■■■■ 4.27
LINC01896-205ENST00000573860 RIMBP3Q9UFD9 1639 aa41.73■■■■■ 4.27
LINC01896-205ENST00000573860 ARHGEF11O15085 1522 aa41.69■■■■■ 4.27
LINC01896-205ENST00000573860 IGF1RP08069 1367 aa41.68■■■■■ 4.26
LINC01896-205ENST00000573860 CUL7Q14999 1698 aa41.65■■■■■ 4.26
LINC01896-205ENST00000573860 NUP160Q12769 1436 aa41.6■■■■■ 4.25
LINC01896-205ENST00000573860 CEP170Q5SW79 1584 aa41.59■■■■■ 4.25
LINC01896-205ENST00000573860 CARMIL1Q5VZK9 1371 aa41.46■■■■■ 4.23
LINC01896-205ENST00000573860 RUSC2Q8N2Y8 1516 aa41.44■■■■■ 4.22
LINC01896-205ENST00000573860 ARAP1Q96P48 1450 aa41.34■■■■■ 4.21
LINC01896-205ENST00000573860 SHROOM2Q13796 1616 aa41.32■■■■■ 4.2
LINC01896-205ENST00000573860 CYB5RLQ6IPT4 315 aa41.3■■■■■ 4.2
LINC01896-205ENST00000573860 RAPGEF2Q9Y4G8 1499 aa41.21■■■■■ 4.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms