RNA–Protein interactions for RNA: ENST00000573450.5

PAM16-207, Transcript of presequence translocase associated motor 16, humanhuman

TSL 2

Gene PAM16, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-207ENST00000573450 NISCHQ9Y2I1 1504 aa29.73■■■□□ 2.35
PAM16-207ENST00000573450 CCDC180Q9P1Z9 1646 aa26.59■■□□□ 1.85
PAM16-207ENST00000573450 ABCC9O60706 1549 aa26.34■■□□□ 1.81
PAM16-207ENST00000573450 RB1CC1Q8TDY2 1594 aa25.23■■□□□ 1.63
PAM16-207ENST00000573450 NACADO15069 1562 aa25.13■■□□□ 1.61
PAM16-207ENST00000573450 DCAF8L2P0C7V8 631 aa25.1■■□□□ 1.61
PAM16-207ENST00000573450 DNAJC5BQ9UF47 199 aa25.07■■□□□ 1.6
PAM16-207ENST00000573450 MYO15BQ96JP2 1530 aa24.87■■□□□ 1.57
PAM16-207ENST00000573450 ZCCHC6Q5VYS8 1495 aaKnown RBP24.67■■□□□ 1.54
PAM16-207ENST00000573450 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
PAM16-207ENST00000573450 PABPN1Q86U42 306 aaKnown RBP eCLIP24.57■■□□□ 1.52
PAM16-207ENST00000573450 UNC13AQ9UPW8 1703 aa24.5■■□□□ 1.51
PAM16-207ENST00000573450 BICRAQ9NZM4 1560 aa24.36■■□□□ 1.49
PAM16-207ENST00000573450 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
PAM16-207ENST00000573450 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
PAM16-207ENST00000573450 EIF4G1Q04637 1599 aaKnown RBP23.81■■□□□ 1.4
PAM16-207ENST00000573450 CC2D2AQ9P2K1 1620 aa23.78■■□□□ 1.4
PAM16-207ENST00000573450 CECR2Q9BXF3 1484 aa23.73■■□□□ 1.39
PAM16-207ENST00000573450 DNAJC5Q9H3Z4 198 aa23.24■■□□□ 1.31
PAM16-207ENST00000573450 NCAPD3P42695 1498 aa23.18■■□□□ 1.3
PAM16-207ENST00000573450 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
PAM16-207ENST00000573450 SMARCA2P51531 1590 aa23.12■■□□□ 1.29
PAM16-207ENST00000573450 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
PAM16-207ENST00000573450 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
PAM16-207ENST00000573450 HMGXB3Q12766 1538 aa23.02■■□□□ 1.28
PAM16-207ENST00000573450 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
PAM16-207ENST00000573450 PEG3Q9GZU2 1588 aa22.92■■□□□ 1.26
PAM16-207ENST00000573450 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
PAM16-207ENST00000573450 ERCC6Q03468 1493 aa22.81■■□□□ 1.24
PAM16-207ENST00000573450 CUX2O14529 1486 aa22.74■■□□□ 1.23
PAM16-207ENST00000573450 NESP48681 1621 aa22.64■■□□□ 1.21
PAM16-207ENST00000573450 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
PAM16-207ENST00000573450 WIZO95785 1651 aa22.58■■□□□ 1.21
PAM16-207ENST00000573450 PDS5BQ9NTI5 1447 aa22.54■■□□□ 1.2
PAM16-207ENST00000573450 RSF1Q96T23 1441 aaPredicted RBP22.52■■□□□ 1.2
PAM16-207ENST00000573450 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
PAM16-207ENST00000573450 TOP2AP11388 1531 aaKnown RBP22.38■■□□□ 1.17
PAM16-207ENST00000573450 THOC2Q8NI27 1593 aaKnown RBP22.36■■□□□ 1.17
PAM16-207ENST00000573450 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
PAM16-207ENST00000573450 CFTRP13569 1480 aa22.27■■□□□ 1.16
PAM16-207ENST00000573450 MRC2Q9UBG0 1479 aa22.27■■□□□ 1.16
PAM16-207ENST00000573450 CEP164Q9UPV0 1460 aa22.24■■□□□ 1.15
PAM16-207ENST00000573450 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
PAM16-207ENST00000573450 WDR62O43379 1518 aa22.16■■□□□ 1.14
PAM16-207ENST00000573450 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
PAM16-207ENST00000573450 PRDM2Q13029 1718 aa22.01■■□□□ 1.11
PAM16-207ENST00000573450 TRIM41Q8WV44 630 aa22■■□□□ 1.11
PAM16-207ENST00000573450 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
PAM16-207ENST00000573450 ABCC8Q09428 1581 aa21.9■■□□□ 1.1
PAM16-207ENST00000573450 IFT140Q96RY7 1462 aa21.81■■□□□ 1.08
PAM16-207ENST00000573450 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
PAM16-207ENST00000573450 SUPT5HO00267 1087 aaKnown RBP21.77■■□□□ 1.08
PAM16-207ENST00000573450 DNMBPQ6XZF7 1577 aa21.75■■□□□ 1.07
PAM16-207ENST00000573450 OSCARQ8IYS5 282 aa21.74■■□□□ 1.07
PAM16-207ENST00000573450 ZNF608Q9ULD9 1512 aaPredicted RBP21.64■■□□□ 1.05
PAM16-207ENST00000573450 POLA1P09884 1462 aaPredicted RBP21.59■■□□□ 1.05
PAM16-207ENST00000573450 SOGA1O94964 1423 aa21.55■■□□□ 1.04
PAM16-207ENST00000573450 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
PAM16-207ENST00000573450 EIF4G3O43432 1585 aaKnown RBP21.55■■□□□ 1.04
PAM16-207ENST00000573450 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.032e-8■■■■■ 38.1
PAM16-207ENST00000573450 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
PAM16-207ENST00000573450 RAD54L2Q9Y4B4 1467 aa21.48■■□□□ 1.03
PAM16-207ENST00000573450 CUX1P39880 1505 aa21.47■■□□□ 1.03
PAM16-207ENST00000573450 WDR97A6NE52 1622 aa21.46■■□□□ 1.03
PAM16-207ENST00000573450 TDRD9Q8NDG6 1382 aaKnown RBP21.45■■□□□ 1.02
PAM16-207ENST00000573450 FBLN2P98095 1184 aa21.43■■□□□ 1.02
PAM16-207ENST00000573450 RIMBP3CA6NJZ7 1639 aa21.38■■□□□ 1.01
PAM16-207ENST00000573450 RIMBP3BA6NNM3 1639 aa21.38■■□□□ 1.01
PAM16-207ENST00000573450 RIMBP3Q9UFD9 1639 aa21.38■■□□□ 1.01
PAM16-207ENST00000573450 GRIN2BQ13224 1484 aa21.34■■□□□ 1.01
PAM16-207ENST00000573450 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
PAM16-207ENST00000573450 MAGI1Q96QZ7 1491 aaPredicted RBP21.32■■□□□ 1
PAM16-207ENST00000573450 CHD1O14646 1710 aa21.32■■□□□ 1
PAM16-207ENST00000573450 WRNQ14191 1432 aaPredicted RBP eCLIP21.31■■□□□ 1
PAM16-207ENST00000573450 SNAPC4Q5SXM2 1469 aa21.31■■□□□ 1
PAM16-207ENST00000573450 ARHGEF11O15085 1522 aa21.3■■□□□ 1
PAM16-207ENST00000573450 GAPVD1Q14C86 1478 aa21.29■■□□□ 1
PAM16-207ENST00000573450 ABCA10Q8WWZ4 1543 aa21.29■■□□□ 1
PAM16-207ENST00000573450 CYB5RLQ6IPT4 315 aa21.24■□□□□ 0.99
PAM16-207ENST00000573450 SYNJ2O15056 1496 aa21.24■□□□□ 0.99
PAM16-207ENST00000573450 TOP2BQ02880 1626 aa21.23■□□□□ 0.99
PAM16-207ENST00000573450 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
PAM16-207ENST00000573450 SYNJ1O43426 1573 aa21.2■□□□□ 0.98
PAM16-207ENST00000573450 PBRM1Q86U86 1689 aa21.18■□□□□ 0.98
PAM16-207ENST00000573450 ABCA5Q8WWZ7 1642 aa21.18■□□□□ 0.98
PAM16-207ENST00000573450 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
PAM16-207ENST00000573450 ARAP1Q96P48 1450 aa21.09■□□□□ 0.97
PAM16-207ENST00000573450 TRHP20396 242 aaPredicted RBP21.06■□□□□ 0.96
PAM16-207ENST00000573450 FHAD1B1AJZ9 1412 aa21.05■□□□□ 0.96
PAM16-207ENST00000573450 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
PAM16-207ENST00000573450 GRIN2AQ12879 1464 aa21.04■□□□□ 0.96
PAM16-207ENST00000573450 ADAMTS12P58397 1594 aa21.01■□□□□ 0.95
PAM16-207ENST00000573450 NUP160Q12769 1436 aa20.95■□□□□ 0.94
PAM16-207ENST00000573450 KIF27Q86VH2 1401 aa20.92■□□□□ 0.94
PAM16-207ENST00000573450 CEP170Q5SW79 1584 aa20.89■□□□□ 0.93
PAM16-207ENST00000573450 IGF1RP08069 1367 aa20.82■□□□□ 0.92
PAM16-207ENST00000573450 JPH4Q96JJ6 628 aa20.8■□□□□ 0.92
PAM16-207ENST00000573450 SHROOM2Q13796 1616 aa20.78■□□□□ 0.92
PAM16-207ENST00000573450 CUL7Q14999 1698 aa20.78■□□□□ 0.92
PAM16-207ENST00000573450 PRG4Q92954 1404 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms