RNA–Protein interactions for RNA: ENST00000573435.1

LCMT1-208, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 3

Gene LCMT1, Length 196 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-208ENST00000573435 AEBP2Q6ZN18 517 aaPredicted RBP11.25□□□□□ -0.61
LCMT1-208ENST00000573435 NISCHQ9Y2I1 1504 aa10.78□□□□□ -0.68
LCMT1-208ENST00000573435 CHIC1Q5VXU3 224 aa10.72□□□□□ -0.69
LCMT1-208ENST00000573435 ABCC9O60706 1549 aa9.83□□□□□ -0.84
LCMT1-208ENST00000573435 CCDC180Q9P1Z9 1646 aa9.67□□□□□ -0.86
LCMT1-208ENST00000573435 POTEDQ86YR6 584 aa9.66□□□□□ -0.86
LCMT1-208ENST00000573435 SENP3Q9H4L4 574 aaPredicted RBP9.59□□□□□ -0.87
LCMT1-208ENST00000573435 PHF23Q9BUL5 403 aaPredicted RBP9.46□□□□□ -0.9
LCMT1-208ENST00000573435 DNAJC5BQ9UF47 199 aa9.36□□□□□ -0.91
LCMT1-208ENST00000573435 RB1CC1Q8TDY2 1594 aa9.22□□□□□ -0.93
LCMT1-208ENST00000573435 UNC13AQ9UPW8 1703 aa9.14□□□□□ -0.95
LCMT1-208ENST00000573435 NACADO15069 1562 aa9.13□□□□□ -0.95
LCMT1-208ENST00000573435 PABPN1Q86U42 306 aaKnown RBP eCLIP9.13□□□□□ -0.95
LCMT1-208ENST00000573435 BICRAQ9NZM4 1560 aa9.09□□□□□ -0.95
LCMT1-208ENST00000573435 DCAF8L2P0C7V8 631 aa9.06□□□□□ -0.96
LCMT1-208ENST00000573435 MYO15BQ96JP2 1530 aa8.97□□□□□ -0.97
LCMT1-208ENST00000573435 ZCCHC6Q5VYS8 1495 aaKnown RBP8.94□□□□□ -0.98
LCMT1-208ENST00000573435 FOXD1Q16676 465 aa8.93□□□□□ -0.98
LCMT1-208ENST00000573435 SCRIBQ14160 1630 aa8.88□□□□□ -0.99
LCMT1-208ENST00000573435 CC2D2AQ9P2K1 1620 aa8.86□□□□□ -0.99
LCMT1-208ENST00000573435 DCAF1Q9Y4B6 1507 aa8.85□□□□□ -0.99
LCMT1-208ENST00000573435 CECR2Q9BXF3 1484 aa8.82□□□□□ -1
LCMT1-208ENST00000573435 EIF4G1Q04637 1599 aaKnown RBP8.82□□□□□ -1
LCMT1-208ENST00000573435 SHROOM4Q9ULL8 1493 aa8.78□□□□□ -1
LCMT1-208ENST00000573435 PLPPR3Q6T4P5 718 aa8.59□□□□□ -1.03
LCMT1-208ENST00000573435 DNAJC5Q9H3Z4 198 aa8.53□□□□□ -1.04
LCMT1-208ENST00000573435 NCAPD3P42695 1498 aa8.46□□□□□ -1.05
LCMT1-208ENST00000573435 ATAD2BQ9ULI0 1458 aa8.46□□□□□ -1.05
LCMT1-208ENST00000573435 NESP48681 1621 aa8.46□□□□□ -1.06
LCMT1-208ENST00000573435 SMARCA4P51532 1647 aa8.44□□□□□ -1.06
LCMT1-208ENST00000573435 CUX2O14529 1486 aa8.41□□□□□ -1.06
LCMT1-208ENST00000573435 ERCC6Q03468 1493 aa8.4□□□□□ -1.06
LCMT1-208ENST00000573435 HMGXB3Q12766 1538 aa8.39□□□□□ -1.07
LCMT1-208ENST00000573435 PPP6R1Q9UPN7 881 aa8.38□□□□□ -1.07
LCMT1-208ENST00000573435 THOC2Q8NI27 1593 aaKnown RBP8.37□□□□□ -1.07
LCMT1-208ENST00000573435 ADRA2BP18089 450 aa8.37□□□□□ -1.07
LCMT1-208ENST00000573435 PIAS4Q8N2W9 510 aaPredicted RBP8.37□□□□□ -1.07
LCMT1-208ENST00000573435 SMARCA2P51531 1590 aa8.36□□□□□ -1.07
LCMT1-208ENST00000573435 MROH2BQ7Z745 1585 aa8.35□□□□□ -1.07
LCMT1-208ENST00000573435 MSH5O43196 834 aa8.34□□□□□ -1.07
LCMT1-208ENST00000573435 PEG3Q9GZU2 1588 aa8.34□□□□□ -1.07
LCMT1-208ENST00000573435 BAZ1BQ9UIG0 1483 aaKnown RBP8.33□□□□□ -1.08
LCMT1-208ENST00000573435 BAZ1AQ9NRL2 1556 aaPredicted RBP8.32□□□□□ -1.08
LCMT1-208ENST00000573435 KIF21AQ7Z4S6 1674 aa8.32□□□□□ -1.08
LCMT1-208ENST00000573435 LAMC3Q9Y6N6 1575 aa8.27□□□□□ -1.09
LCMT1-208ENST00000573435 WIZO95785 1651 aa8.24□□□□□ -1.09
LCMT1-208ENST00000573435 WDR62O43379 1518 aa8.19□□□□□ -1.1
LCMT1-208ENST00000573435 CADPSQ9ULU8 1353 aa8.19□□□□□ -1.1
LCMT1-208ENST00000573435 PDS5BQ9NTI5 1447 aa8.18□□□□□ -1.1
LCMT1-208ENST00000573435 MRC2Q9UBG0 1479 aa8.18□□□□□ -1.1
LCMT1-208ENST00000573435 TRIM41Q8WV44 630 aa8.13□□□□□ -1.11
LCMT1-208ENST00000573435 FANCD2Q9BXW9 1451 aa8.13□□□□□ -1.11
LCMT1-208ENST00000573435 URB2Q14146 1524 aaKnown RBP8.12□□□□□ -1.11
LCMT1-208ENST00000573435 CEP164Q9UPV0 1460 aa8.12□□□□□ -1.11
LCMT1-208ENST00000573435 RSF1Q96T23 1441 aaPredicted RBP8.12□□□□□ -1.11
LCMT1-208ENST00000573435 CFTRP13569 1480 aa8.1□□□□□ -1.11
LCMT1-208ENST00000573435 TOP2AP11388 1531 aaKnown RBP8.08□□□□□ -1.12
LCMT1-208ENST00000573435 ZNF608Q9ULD9 1512 aaPredicted RBP8.05□□□□□ -1.12
LCMT1-208ENST00000573435 CCDC88BA6NC98 1476 aa8.01□□□□□ -1.13
LCMT1-208ENST00000573435 PRDM2Q13029 1718 aa8□□□□□ -1.13
LCMT1-208ENST00000573435 RIMBP3CA6NJZ7 1639 aa8□□□□□ -1.13
LCMT1-208ENST00000573435 RIMBP3BA6NNM3 1639 aa8□□□□□ -1.13
LCMT1-208ENST00000573435 RIMBP3Q9UFD9 1639 aa8□□□□□ -1.13
LCMT1-208ENST00000573435 TOPBP1Q92547 1522 aa7.98□□□□□ -1.13
LCMT1-208ENST00000573435 OSCARQ8IYS5 282 aa7.97□□□□□ -1.13
LCMT1-208ENST00000573435 EIF4G3O43432 1585 aaKnown RBP7.97□□□□□ -1.13
LCMT1-208ENST00000573435 ARHGEF11O15085 1522 aa7.95□□□□□ -1.14
LCMT1-208ENST00000573435 TARBP1Q13395 1621 aaKnown RBP7.95□□□□□ -1.14
LCMT1-208ENST00000573435 IFT140Q96RY7 1462 aa7.94□□□□□ -1.14
LCMT1-208ENST00000573435 AQRO60306 1485 aaKnown RBP eCLIP7.93□□□□□ -1.14
LCMT1-208ENST00000573435 CHD1O14646 1710 aa7.92□□□□□ -1.14
LCMT1-208ENST00000573435 DNMBPQ6XZF7 1577 aa7.92□□□□□ -1.14
LCMT1-208ENST00000573435 POLA1P09884 1462 aaPredicted RBP7.9□□□□□ -1.14
LCMT1-208ENST00000573435 ARAP1Q96P48 1450 aa7.9□□□□□ -1.14
LCMT1-208ENST00000573435 RAD54L2Q9Y4B4 1467 aa7.9□□□□□ -1.14
LCMT1-208ENST00000573435 CUX1P39880 1505 aa7.85□□□□□ -1.15
LCMT1-208ENST00000573435 TDRD9Q8NDG6 1382 aaKnown RBP7.84□□□□□ -1.15
LCMT1-208ENST00000573435 CLASP1Q7Z460 1538 aa7.84□□□□□ -1.15
LCMT1-208ENST00000573435 FGD5Q6ZNL6 1462 aa7.84□□□□□ -1.15
LCMT1-208ENST00000573435 CYB5RLQ6IPT4 315 aa7.84□□□□□ -1.15
LCMT1-208ENST00000573435 SNAPC4Q5SXM2 1469 aa7.83□□□□□ -1.16
LCMT1-208ENST00000573435 WDR97A6NE52 1622 aa7.82□□□□□ -1.16
LCMT1-208ENST00000573435 ABCC8Q09428 1581 aa7.82□□□□□ -1.16
LCMT1-208ENST00000573435 SOGA1O94964 1423 aa7.8□□□□□ -1.16
LCMT1-208ENST00000573435 FBLN2P98095 1184 aa7.8□□□□□ -1.16
LCMT1-208ENST00000573435 ERCC6L2Q5T890 1561 aa7.79□□□□□ -1.16
LCMT1-208ENST00000573435 PBRM1Q86U86 1689 aa7.76□□□□□ -1.17
LCMT1-208ENST00000573435 ABCA5Q8WWZ7 1642 aa7.75□□□□□ -1.17
LCMT1-208ENST00000573435 GRIN2BQ13224 1484 aa7.75□□□□□ -1.17
LCMT1-208ENST00000573435 MAGI1Q96QZ7 1491 aaPredicted RBP7.75□□□□□ -1.17
LCMT1-208ENST00000573435 SYNJ2O15056 1496 aa7.74□□□□□ -1.17
LCMT1-208ENST00000573435 SYNJ1O43426 1573 aa7.73□□□□□ -1.17
LCMT1-208ENST00000573435 TRHP20396 242 aaPredicted RBP7.73□□□□□ -1.17
LCMT1-208ENST00000573435 GAPVD1Q14C86 1478 aa7.72□□□□□ -1.17
LCMT1-208ENST00000573435 ABCA10Q8WWZ4 1543 aa7.72□□□□□ -1.17
LCMT1-208ENST00000573435 CEP170Q5SW79 1584 aa7.71□□□□□ -1.17
LCMT1-208ENST00000573435 CHMP7Q8WUX9 453 aaPredicted RBP7.7□□□□□ -1.18
LCMT1-208ENST00000573435 ADAMTS12P58397 1594 aa7.7□□□□□ -1.18
LCMT1-208ENST00000573435 GRIN2AQ12879 1464 aa7.68□□□□□ -1.18
LCMT1-208ENST00000573435 MAPK8IP2Q13387 824 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms