RNA–Protein interactions for RNA: ENST00000573377.1

ITGB3-203, Transcript of integrin subunit beta 3, humanhuman

TSL 1 (best)

Gene ITGB3, Length 408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3-203ENST00000573377 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
ITGB3-203ENST00000573377 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
ITGB3-203ENST00000573377 ABCC9O60706 1549 aa29.84■■■□□ 2.37
ITGB3-203ENST00000573377 RB1CC1Q8TDY2 1594 aa28.52■■■□□ 2.16
ITGB3-203ENST00000573377 NACADO15069 1562 aa28.34■■■□□ 2.13
ITGB3-203ENST00000573377 MYO15BQ96JP2 1530 aa28.02■■■□□ 2.08
ITGB3-203ENST00000573377 DNAJC5BQ9UF47 199 aa28■■■□□ 2.07
ITGB3-203ENST00000573377 DCAF8L2P0C7V8 631 aa27.93■■■□□ 2.06
ITGB3-203ENST00000573377 UNC13AQ9UPW8 1703 aa27.79■■■□□ 2.04
ITGB3-203ENST00000573377 PABPN1Q86U42 306 aaKnown RBP eCLIP27.71■■■□□ 2.03
ITGB3-203ENST00000573377 BICRAQ9NZM4 1560 aa27.62■■■□□ 2.01
ITGB3-203ENST00000573377 DCAF1Q9Y4B6 1507 aa27.6■■■□□ 2.01
ITGB3-203ENST00000573377 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
ITGB3-203ENST00000573377 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
ITGB3-203ENST00000573377 SCRIBQ14160 1630 aa27.13■■□□□ 1.93
ITGB3-203ENST00000573377 CC2D2AQ9P2K1 1620 aa27.01■■□□□ 1.92
ITGB3-203ENST00000573377 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
ITGB3-203ENST00000573377 CECR2Q9BXF3 1484 aa26.95■■□□□ 1.91
ITGB3-203ENST00000573377 NCAPD3P42695 1498 aa26.15■■□□□ 1.78
ITGB3-203ENST00000573377 ATAD2BQ9ULI0 1458 aa26.01■■□□□ 1.75
ITGB3-203ENST00000573377 SMARCA2P51531 1590 aa25.99■■□□□ 1.75
ITGB3-203ENST00000573377 HMGXB3Q12766 1538 aa25.96■■□□□ 1.75
ITGB3-203ENST00000573377 SMARCA4P51532 1647 aa25.96■■□□□ 1.75
ITGB3-203ENST00000573377 CUX2O14529 1486 aa25.9■■□□□ 1.74
ITGB3-203ENST00000573377 DNAJC5Q9H3Z4 198 aa25.88■■□□□ 1.73
ITGB3-203ENST00000573377 BAZ1AQ9NRL2 1556 aaPredicted RBP25.87■■□□□ 1.73
ITGB3-203ENST00000573377 ERCC6Q03468 1493 aa25.82■■□□□ 1.72
ITGB3-203ENST00000573377 PEG3Q9GZU2 1588 aa25.79■■□□□ 1.72
ITGB3-203ENST00000573377 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
ITGB3-203ENST00000573377 NESP48681 1621 aa25.59■■□□□ 1.69
ITGB3-203ENST00000573377 MROH2BQ7Z745 1585 aa25.57■■□□□ 1.68
ITGB3-203ENST00000573377 LAMC3Q9Y6N6 1575 aa25.57■■□□□ 1.68
ITGB3-203ENST00000573377 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.66
ITGB3-203ENST00000573377 PDS5BQ9NTI5 1447 aa25.42■■□□□ 1.66
ITGB3-203ENST00000573377 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
ITGB3-203ENST00000573377 KIF21AQ7Z4S6 1674 aa25.31■■□□□ 1.64
ITGB3-203ENST00000573377 WIZO95785 1651 aa25.24■■□□□ 1.63
ITGB3-203ENST00000573377 MRC2Q9UBG0 1479 aa25.16■■□□□ 1.62
ITGB3-203ENST00000573377 WDR62O43379 1518 aa25.12■■□□□ 1.61
ITGB3-203ENST00000573377 RSF1Q96T23 1441 aaPredicted RBP25.05■■□□□ 1.6
ITGB3-203ENST00000573377 CEP164Q9UPV0 1460 aa25.05■■□□□ 1.6
ITGB3-203ENST00000573377 CFTRP13569 1480 aa25.02■■□□□ 1.6
ITGB3-203ENST00000573377 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
ITGB3-203ENST00000573377 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
ITGB3-203ENST00000573377 PRDM2Q13029 1718 aa24.79■■□□□ 1.56
ITGB3-203ENST00000573377 URB2Q14146 1524 aaKnown RBP24.77■■□□□ 1.56
ITGB3-203ENST00000573377 CCDC88BA6NC98 1476 aa24.68■■□□□ 1.54
ITGB3-203ENST00000573377 OSCARQ8IYS5 282 aa24.64■■□□□ 1.54
ITGB3-203ENST00000573377 TRIM41Q8WV44 630 aa24.58■■□□□ 1.53
ITGB3-203ENST00000573377 ABCC8Q09428 1581 aa24.58■■□□□ 1.52
ITGB3-203ENST00000573377 IFT140Q96RY7 1462 aa24.58■■□□□ 1.52
ITGB3-203ENST00000573377 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
ITGB3-203ENST00000573377 DNMBPQ6XZF7 1577 aa24.45■■□□□ 1.5
ITGB3-203ENST00000573377 ZNF608Q9ULD9 1512 aaPredicted RBP24.44■■□□□ 1.5
ITGB3-203ENST00000573377 EIF4G3O43432 1585 aaKnown RBP24.35■■□□□ 1.49
ITGB3-203ENST00000573377 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
ITGB3-203ENST00000573377 RIMBP3CA6NJZ7 1639 aa24.29■■□□□ 1.48
ITGB3-203ENST00000573377 RIMBP3BA6NNM3 1639 aa24.29■■□□□ 1.48
ITGB3-203ENST00000573377 RIMBP3Q9UFD9 1639 aa24.29■■□□□ 1.48
ITGB3-203ENST00000573377 POLA1P09884 1462 aaPredicted RBP24.26■■□□□ 1.47
ITGB3-203ENST00000573377 ARHGEF11O15085 1522 aa24.23■■□□□ 1.47
ITGB3-203ENST00000573377 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.47
ITGB3-203ENST00000573377 WDR97A6NE52 1622 aa24.2■■□□□ 1.46
ITGB3-203ENST00000573377 CHD1O14646 1710 aa24.15■■□□□ 1.46
ITGB3-203ENST00000573377 SOGA1O94964 1423 aa24.15■■□□□ 1.46
ITGB3-203ENST00000573377 RAD54L2Q9Y4B4 1467 aa24.1■■□□□ 1.45
ITGB3-203ENST00000573377 FGD5Q6ZNL6 1462 aa24.08■■□□□ 1.45
ITGB3-203ENST00000573377 CUX1P39880 1505 aa24.05■■□□□ 1.44
ITGB3-203ENST00000573377 TDRD9Q8NDG6 1382 aaKnown RBP24.04■■□□□ 1.44
ITGB3-203ENST00000573377 MAGI1Q96QZ7 1491 aaPredicted RBP24.02■■□□□ 1.44
ITGB3-203ENST00000573377 FBLN2P98095 1184 aa24.02■■□□□ 1.44
ITGB3-203ENST00000573377 SNAPC4Q5SXM2 1469 aa23.99■■□□□ 1.43
ITGB3-203ENST00000573377 CYB5RLQ6IPT4 315 aa23.98■■□□□ 1.43
ITGB3-203ENST00000573377 GRIN2BQ13224 1484 aa23.98■■□□□ 1.43
ITGB3-203ENST00000573377 ARAP1Q96P48 1450 aa23.97■■□□□ 1.43
ITGB3-203ENST00000573377 SYNJ1O43426 1573 aa23.94■■□□□ 1.42
ITGB3-203ENST00000573377 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
ITGB3-203ENST00000573377 CHMP7Q8WUX9 453 aaPredicted RBP23.91■■□□□ 1.42
ITGB3-203ENST00000573377 SYNJ2O15056 1496 aa23.91■■□□□ 1.42
ITGB3-203ENST00000573377 ABCA10Q8WWZ4 1543 aa23.87■■□□□ 1.41
ITGB3-203ENST00000573377 GAPVD1Q14C86 1478 aa23.87■■□□□ 1.41
ITGB3-203ENST00000573377 PBRM1Q86U86 1689 aa23.84■■□□□ 1.41
ITGB3-203ENST00000573377 ABCA5Q8WWZ7 1642 aa23.82■■□□□ 1.4
ITGB3-203ENST00000573377 SUPT5HO00267 1087 aaKnown RBP23.76■■□□□ 1.39
ITGB3-203ENST00000573377 WRNQ14191 1432 aaPredicted RBP eCLIP23.75■■□□□ 1.39
ITGB3-203ENST00000573377 TRHP20396 242 aaPredicted RBP23.72■■□□□ 1.39
ITGB3-203ENST00000573377 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.39
ITGB3-203ENST00000573377 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
ITGB3-203ENST00000573377 GRIN2AQ12879 1464 aa23.65■■□□□ 1.38
ITGB3-203ENST00000573377 ADAMTS12P58397 1594 aa23.63■■□□□ 1.37
ITGB3-203ENST00000573377 NUP160Q12769 1436 aa23.6■■□□□ 1.37
ITGB3-203ENST00000573377 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
ITGB3-203ENST00000573377 ERICH3Q5RHP9 1530 aa23.59■■□□□ 1.37
ITGB3-203ENST00000573377 CEP170Q5SW79 1584 aa23.53■■□□□ 1.36
ITGB3-203ENST00000573377 SHROOM2Q13796 1616 aa23.51■■□□□ 1.35
ITGB3-203ENST00000573377 ERCC6L2Q5T890 1561 aa23.44■■□□□ 1.34
ITGB3-203ENST00000573377 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
ITGB3-203ENST00000573377 PRG4Q92954 1404 aaPredicted RBP23.32■■□□□ 1.32
ITGB3-203ENST00000573377 RUSC2Q8N2Y8 1516 aa23.3■■□□□ 1.32
ITGB3-203ENST00000573377 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms