RNA–Protein interactions for RNA: ENST00000573236.5

PAM16-206, Transcript of presequence translocase associated motor 16, humanhuman

TSL 1 (best)

Gene PAM16, Length 704 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-206ENST00000573236 NISCHQ9Y2I1 1504 aa38.04■■■■□ 3.68
PAM16-206ENST00000573236 CCDC180Q9P1Z9 1646 aa33.88■■■■□ 3.01
PAM16-206ENST00000573236 ABCC9O60706 1549 aa33.42■■■□□ 2.94
PAM16-206ENST00000573236 RB1CC1Q8TDY2 1594 aa31.99■■■□□ 2.71
PAM16-206ENST00000573236 NACADO15069 1562 aa31.9■■■□□ 2.7
PAM16-206ENST00000573236 DCAF8L2P0C7V8 631 aa31.9■■■□□ 2.7
PAM16-206ENST00000573236 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
PAM16-206ENST00000573236 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
PAM16-206ENST00000573236 DCAF1Q9Y4B6 1507 aa31.43■■■□□ 2.62
PAM16-206ENST00000573236 UNC13AQ9UPW8 1703 aa31.31■■■□□ 2.6
PAM16-206ENST00000573236 PABPN1Q86U42 306 aaKnown RBP eCLIP31.21■■■□□ 2.59
PAM16-206ENST00000573236 BICRAQ9NZM4 1560 aa31.09■■■□□ 2.57
PAM16-206ENST00000573236 SCRIBQ14160 1630 aa30.95■■■□□ 2.55
PAM16-206ENST00000573236 DNAJC5BQ9UF47 199 aa30.9■■■□□ 2.54
PAM16-206ENST00000573236 SHROOM4Q9ULL8 1493 aa30.65■■■□□ 2.5
PAM16-206ENST00000573236 EIF4G1Q04637 1599 aaKnown RBP30.26■■■□□ 2.43
PAM16-206ENST00000573236 CC2D2AQ9P2K1 1620 aa30.2■■■□□ 2.43
PAM16-206ENST00000573236 CECR2Q9BXF3 1484 aa30.03■■■□□ 2.4
PAM16-206ENST00000573236 SMARCA4P51532 1647 aa29.56■■■□□ 2.32
PAM16-206ENST00000573236 BAZ1AQ9NRL2 1556 aaPredicted RBP29.47■■■□□ 2.31
PAM16-206ENST00000573236 NCAPD3P42695 1498 aa29.46■■■□□ 2.31
PAM16-206ENST00000573236 ATAD2BQ9ULI0 1458 aa29.46■■■□□ 2.31
PAM16-206ENST00000573236 SMARCA2P51531 1590 aa29.39■■■□□ 2.29
PAM16-206ENST00000573236 MROH2BQ7Z745 1585 aa29.34■■■□□ 2.29
PAM16-206ENST00000573236 HMGXB3Q12766 1538 aa29.28■■■□□ 2.28
PAM16-206ENST00000573236 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.27
PAM16-206ENST00000573236 BAZ1BQ9UIG0 1483 aaKnown RBP29.2■■■□□ 2.26
PAM16-206ENST00000573236 WIZO95785 1651 aa29.02■■■□□ 2.24
PAM16-206ENST00000573236 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
PAM16-206ENST00000573236 NESP48681 1621 aa28.87■■■□□ 2.21
PAM16-206ENST00000573236 ERCC6Q03468 1493 aa28.78■■■□□ 2.2
PAM16-206ENST00000573236 LAMC3Q9Y6N6 1575 aa28.7■■■□□ 2.18
PAM16-206ENST00000573236 TOP2AP11388 1531 aaKnown RBP28.66■■■□□ 2.18
PAM16-206ENST00000573236 CADPSQ9ULU8 1353 aa28.6■■■□□ 2.17
PAM16-206ENST00000573236 CUX2O14529 1486 aa28.53■■■□□ 2.16
PAM16-206ENST00000573236 PDS5BQ9NTI5 1447 aa28.52■■■□□ 2.16
PAM16-206ENST00000573236 KIF21AQ7Z4S6 1674 aa28.5■■■□□ 2.15
PAM16-206ENST00000573236 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.14
PAM16-206ENST00000573236 CFTRP13569 1480 aa28.38■■■□□ 2.13
PAM16-206ENST00000573236 CCDC88BA6NC98 1476 aa28.35■■■□□ 2.13
PAM16-206ENST00000573236 FANCD2Q9BXW9 1451 aa28.27■■■□□ 2.12
PAM16-206ENST00000573236 MRC2Q9UBG0 1479 aa28.26■■■□□ 2.11
PAM16-206ENST00000573236 CEP164Q9UPV0 1460 aa28.24■■■□□ 2.11
PAM16-206ENST00000573236 WDR62O43379 1518 aa28.17■■■□□ 2.1
PAM16-206ENST00000573236 PRDM2Q13029 1718 aa28.13■■■□□ 2.09
PAM16-206ENST00000573236 SUPT5HO00267 1087 aaKnown RBP28.06■■■□□ 2.08
PAM16-206ENST00000573236 URB2Q14146 1524 aaKnown RBP28.02■■■□□ 2.08
PAM16-206ENST00000573236 DNAJC5Q9H3Z4 198 aa27.94■■■□□ 2.06
PAM16-206ENST00000573236 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
PAM16-206ENST00000573236 DNMBPQ6XZF7 1577 aa27.74■■■□□ 2.03
PAM16-206ENST00000573236 ABCC8Q09428 1581 aa27.73■■■□□ 2.03
PAM16-206ENST00000573236 IFT140Q96RY7 1462 aa27.66■■■□□ 2.02
PAM16-206ENST00000573236 ZNF608Q9ULD9 1512 aaPredicted RBP27.61■■■□□ 2.01
PAM16-206ENST00000573236 POLA1P09884 1462 aaPredicted RBP27.56■■■□□ 2
PAM16-206ENST00000573236 CUX1P39880 1505 aa27.53■■■□□ 2
PAM16-206ENST00000573236 TARBP1Q13395 1621 aaKnown RBP27.52■■■□□ 2
PAM16-206ENST00000573236 RAD54L2Q9Y4B4 1467 aa27.47■■□□□ 1.99
PAM16-206ENST00000573236 FGD5Q6ZNL6 1462 aa27.46■■□□□ 1.99
PAM16-206ENST00000573236 EIF4G3O43432 1585 aaKnown RBP27.45■■□□□ 1.99
PAM16-206ENST00000573236 SOGA1O94964 1423 aa27.43■■□□□ 1.98
PAM16-206ENST00000573236 AQRO60306 1485 aaKnown RBP eCLIP27.41■■□□□ 1.982e-8■■■■■ 38.1
PAM16-206ENST00000573236 OSCARQ8IYS5 282 aa27.34■■□□□ 1.97
PAM16-206ENST00000573236 TDRD9Q8NDG6 1382 aaKnown RBP27.33■■□□□ 1.97
PAM16-206ENST00000573236 WRNQ14191 1432 aaPredicted RBP eCLIP27.26■■□□□ 1.95
PAM16-206ENST00000573236 WDR97A6NE52 1622 aa27.23■■□□□ 1.95
PAM16-206ENST00000573236 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
PAM16-206ENST00000573236 TOP2BQ02880 1626 aa27.21■■□□□ 1.95
PAM16-206ENST00000573236 BIVM-ERCC5R4GMW8 1640 aa27.21■■□□□ 1.95
PAM16-206ENST00000573236 ABCA10Q8WWZ4 1543 aa27.17■■□□□ 1.94
PAM16-206ENST00000573236 CHD1O14646 1710 aa27.16■■□□□ 1.94
PAM16-206ENST00000573236 SNAPC4Q5SXM2 1469 aa27.14■■□□□ 1.94
PAM16-206ENST00000573236 GRIN2BQ13224 1484 aa27.13■■□□□ 1.93
PAM16-206ENST00000573236 FBLN2P98095 1184 aa27.12■■□□□ 1.93
PAM16-206ENST00000573236 GAPVD1Q14C86 1478 aa27.11■■□□□ 1.93
PAM16-206ENST00000573236 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
PAM16-206ENST00000573236 PBRM1Q86U86 1689 aa27.07■■□□□ 1.92
PAM16-206ENST00000573236 MAGI1Q96QZ7 1491 aaPredicted RBP27.06■■□□□ 1.92
PAM16-206ENST00000573236 CHMP7Q8WUX9 453 aaPredicted RBP27■■□□□ 1.91
PAM16-206ENST00000573236 SYNJ2O15056 1496 aa26.98■■□□□ 1.91
PAM16-206ENST00000573236 TRIM41Q8WV44 630 aa26.96■■□□□ 1.91
PAM16-206ENST00000573236 RIMBP3CA6NJZ7 1639 aa26.94■■□□□ 1.9
PAM16-206ENST00000573236 RIMBP3BA6NNM3 1639 aa26.94■■□□□ 1.9
PAM16-206ENST00000573236 RIMBP3Q9UFD9 1639 aa26.94■■□□□ 1.9
PAM16-206ENST00000573236 ARHGEF11O15085 1522 aa26.9■■□□□ 1.9
PAM16-206ENST00000573236 CLASP1Q7Z460 1538 aa26.85■■□□□ 1.89
PAM16-206ENST00000573236 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
PAM16-206ENST00000573236 ERICH3Q5RHP9 1530 aa26.82■■□□□ 1.88
PAM16-206ENST00000573236 FHAD1B1AJZ9 1412 aa26.78■■□□□ 1.88
PAM16-206ENST00000573236 GRIN2AQ12879 1464 aa26.78■■□□□ 1.88
PAM16-206ENST00000573236 ARAP1Q96P48 1450 aa26.69■■□□□ 1.86
PAM16-206ENST00000573236 CYB5RLQ6IPT4 315 aa26.69■■□□□ 1.86
PAM16-206ENST00000573236 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
PAM16-206ENST00000573236 CEP170Q5SW79 1584 aa26.68■■□□□ 1.86
PAM16-206ENST00000573236 NUP160Q12769 1436 aa26.68■■□□□ 1.86
PAM16-206ENST00000573236 IGF1RP08069 1367 aa26.64■■□□□ 1.86
PAM16-206ENST00000573236 CUL7Q14999 1698 aa26.54■■□□□ 1.84
PAM16-206ENST00000573236 ERCC6L2Q5T890 1561 aa26.51■■□□□ 1.83
PAM16-206ENST00000573236 SHROOM2Q13796 1616 aa26.5■■□□□ 1.83
PAM16-206ENST00000573236 CARMIL1Q5VZK9 1371 aa26.46■■□□□ 1.83
PAM16-206ENST00000573236 RUSC2Q8N2Y8 1516 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms