RNA–Protein interactions for RNA: ENST00000573214.5

STRA6-214, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 3

Gene STRA6, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-214ENST00000573214 NISCHQ9Y2I1 1504 aa33.74■■■□□ 2.99
STRA6-214ENST00000573214 CCDC180Q9P1Z9 1646 aa30.18■■■□□ 2.42
STRA6-214ENST00000573214 ABCC9O60706 1549 aa29.54■■■□□ 2.32
STRA6-214ENST00000573214 RB1CC1Q8TDY2 1594 aa28.44■■■□□ 2.14
STRA6-214ENST00000573214 NACADO15069 1562 aa28.34■■■□□ 2.13
STRA6-214ENST00000573214 DCAF8L2P0C7V8 631 aa28.27■■■□□ 2.12
STRA6-214ENST00000573214 ZCCHC6Q5VYS8 1495 aaKnown RBP28.08■■■□□ 2.09
STRA6-214ENST00000573214 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.08
STRA6-214ENST00000573214 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
STRA6-214ENST00000573214 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
STRA6-214ENST00000573214 PABPN1Q86U42 306 aaKnown RBP eCLIP27.51■■□□□ 1.99
STRA6-214ENST00000573214 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
STRA6-214ENST00000573214 BICRAQ9NZM4 1560 aa27.48■■□□□ 1.99
STRA6-214ENST00000573214 SHROOM4Q9ULL8 1493 aa27.25■■□□□ 1.95
STRA6-214ENST00000573214 DNAJC5BQ9UF47 199 aa27.05■■□□□ 1.92
STRA6-214ENST00000573214 EIF4G1Q04637 1599 aaKnown RBP26.81■■□□□ 1.88
STRA6-214ENST00000573214 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
STRA6-214ENST00000573214 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
STRA6-214ENST00000573214 SMARCA4P51532 1647 aa26.27■■□□□ 1.8
STRA6-214ENST00000573214 BAZ1AQ9NRL2 1556 aaPredicted RBP26.22■■□□□ 1.79
STRA6-214ENST00000573214 SMARCA2P51531 1590 aa26.13■■□□□ 1.77
STRA6-214ENST00000573214 ATAD2BQ9ULI0 1458 aa26.08■■□□□ 1.77
STRA6-214ENST00000573214 NCAPD3P42695 1498 aa26.06■■□□□ 1.76
STRA6-214ENST00000573214 HMGXB3Q12766 1538 aa26.01■■□□□ 1.75
STRA6-214ENST00000573214 MROH2BQ7Z745 1585 aa25.98■■□□□ 1.75
STRA6-214ENST00000573214 PEG3Q9GZU2 1588 aa25.97■■□□□ 1.75
STRA6-214ENST00000573214 BAZ1BQ9UIG0 1483 aaKnown RBP25.92■■□□□ 1.74
STRA6-214ENST00000573214 WIZO95785 1651 aa25.77■■□□□ 1.72
STRA6-214ENST00000573214 RSF1Q96T23 1441 aaPredicted RBP25.61■■□□□ 1.69
STRA6-214ENST00000573214 ERCC6Q03468 1493 aa25.54■■□□□ 1.68
STRA6-214ENST00000573214 LAMC3Q9Y6N6 1575 aa25.51■■□□□ 1.67
STRA6-214ENST00000573214 NESP48681 1621 aa25.49■■□□□ 1.67
STRA6-214ENST00000573214 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
STRA6-214ENST00000573214 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
STRA6-214ENST00000573214 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
STRA6-214ENST00000573214 PDS5BQ9NTI5 1447 aa25.3■■□□□ 1.64
STRA6-214ENST00000573214 CUX2O14529 1486 aa25.28■■□□□ 1.64
STRA6-214ENST00000573214 THOC2Q8NI27 1593 aaKnown RBP25.2■■□□□ 1.62
STRA6-214ENST00000573214 PRDM2Q13029 1718 aa25.17■■□□□ 1.62
STRA6-214ENST00000573214 CFTRP13569 1480 aa25.14■■□□□ 1.61
STRA6-214ENST00000573214 CCDC88BA6NC98 1476 aa25.12■■□□□ 1.61
STRA6-214ENST00000573214 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
STRA6-214ENST00000573214 FANCD2Q9BXW9 1451 aa25.06■■□□□ 1.6
STRA6-214ENST00000573214 MRC2Q9UBG0 1479 aa25.05■■□□□ 1.6
STRA6-214ENST00000573214 WDR62O43379 1518 aa24.96■■□□□ 1.59
STRA6-214ENST00000573214 SUPT5HO00267 1087 aaKnown RBP24.93■■□□□ 1.58
STRA6-214ENST00000573214 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
STRA6-214ENST00000573214 ABCC8Q09428 1581 aa24.69■■□□□ 1.54
STRA6-214ENST00000573214 DNMBPQ6XZF7 1577 aa24.66■■□□□ 1.54
STRA6-214ENST00000573214 TOPBP1Q92547 1522 aa24.65■■□□□ 1.54
STRA6-214ENST00000573214 IFT140Q96RY7 1462 aa24.54■■□□□ 1.52
STRA6-214ENST00000573214 DNAJC5Q9H3Z4 198 aa24.54■■□□□ 1.52
STRA6-214ENST00000573214 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
STRA6-214ENST00000573214 TARBP1Q13395 1621 aaKnown RBP24.4■■□□□ 1.5
STRA6-214ENST00000573214 CUX1P39880 1505 aa24.4■■□□□ 1.5
STRA6-214ENST00000573214 EIF4G3O43432 1585 aaKnown RBP24.38■■□□□ 1.49
STRA6-214ENST00000573214 ZNF608Q9ULD9 1512 aaPredicted RBP24.38■■□□□ 1.49
STRA6-214ENST00000573214 FGD5Q6ZNL6 1462 aa24.36■■□□□ 1.49
STRA6-214ENST00000573214 SOGA1O94964 1423 aa24.32■■□□□ 1.48
STRA6-214ENST00000573214 RAD54L2Q9Y4B4 1467 aa24.29■■□□□ 1.48
STRA6-214ENST00000573214 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
STRA6-214ENST00000573214 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
STRA6-214ENST00000573214 AQRO60306 1485 aaKnown RBP eCLIP24.23■■□□□ 1.47
STRA6-214ENST00000573214 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
STRA6-214ENST00000573214 WRNQ14191 1432 aaPredicted RBP eCLIP24.21■■□□□ 1.47
STRA6-214ENST00000573214 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
STRA6-214ENST00000573214 OSCARQ8IYS5 282 aa24.16■■□□□ 1.46
STRA6-214ENST00000573214 TDRD9Q8NDG6 1382 aaKnown RBP24.16■■□□□ 1.46
STRA6-214ENST00000573214 CHD1O14646 1710 aa24.15■■□□□ 1.46
STRA6-214ENST00000573214 PBRM1Q86U86 1689 aa24.14■■□□□ 1.45
STRA6-214ENST00000573214 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
STRA6-214ENST00000573214 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
STRA6-214ENST00000573214 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
STRA6-214ENST00000573214 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
STRA6-214ENST00000573214 SNAPC4Q5SXM2 1469 aa24.05■■□□□ 1.44
STRA6-214ENST00000573214 MAGI1Q96QZ7 1491 aaPredicted RBP24.03■■□□□ 1.44
STRA6-214ENST00000573214 FBLN2P98095 1184 aa24.03■■□□□ 1.44
STRA6-214ENST00000573214 CHMP7Q8WUX9 453 aaPredicted RBP23.93■■□□□ 1.42
STRA6-214ENST00000573214 SYNJ2O15056 1496 aa23.93■■□□□ 1.42
STRA6-214ENST00000573214 RIMBP3CA6NJZ7 1639 aa23.86■■□□□ 1.41
STRA6-214ENST00000573214 RIMBP3BA6NNM3 1639 aa23.86■■□□□ 1.41
STRA6-214ENST00000573214 RIMBP3Q9UFD9 1639 aa23.86■■□□□ 1.41
STRA6-214ENST00000573214 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
STRA6-214ENST00000573214 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
STRA6-214ENST00000573214 ARHGEF11O15085 1522 aa23.79■■□□□ 1.4
STRA6-214ENST00000573214 CLASP1Q7Z460 1538 aa23.78■■□□□ 1.4
STRA6-214ENST00000573214 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
STRA6-214ENST00000573214 TRIM41Q8WV44 630 aa23.76■■□□□ 1.39
STRA6-214ENST00000573214 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
STRA6-214ENST00000573214 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
STRA6-214ENST00000573214 CUL7Q14999 1698 aa23.69■■□□□ 1.38
STRA6-214ENST00000573214 CEP170Q5SW79 1584 aa23.65■■□□□ 1.38
STRA6-214ENST00000573214 NUP160Q12769 1436 aa23.61■■□□□ 1.37
STRA6-214ENST00000573214 ARAP1Q96P48 1450 aa23.57■■□□□ 1.36
STRA6-214ENST00000573214 IGF1RP08069 1367 aa23.56■■□□□ 1.36
STRA6-214ENST00000573214 CYB5RLQ6IPT4 315 aa23.55■■□□□ 1.36
STRA6-214ENST00000573214 SHROOM2Q13796 1616 aa23.51■■□□□ 1.35
STRA6-214ENST00000573214 RUSC2Q8N2Y8 1516 aa23.5■■□□□ 1.35
STRA6-214ENST00000573214 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
STRA6-214ENST00000573214 ERCC6L2Q5T890 1561 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms