RNA–Protein interactions for RNA: ENST00000573123.1

CXCL16-202, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS ALT2 TSL 2

Gene CXCL16, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-202ENST00000573123 NISCHQ9Y2I1 1504 aa44.23■■■■■ 4.67
CXCL16-202ENST00000573123 CCDC180Q9P1Z9 1646 aa39.66■■■■□ 3.94
CXCL16-202ENST00000573123 ABCC9O60706 1549 aa39.57■■■■□ 3.93
CXCL16-202ENST00000573123 RB1CC1Q8TDY2 1594 aa37.75■■■■□ 3.63
CXCL16-202ENST00000573123 NACADO15069 1562 aa37.51■■■■□ 3.6
CXCL16-202ENST00000573123 DCAF8L2P0C7V8 631 aa37.29■■■■□ 3.56
CXCL16-202ENST00000573123 MYO15BQ96JP2 1530 aa37.05■■■■□ 3.52
CXCL16-202ENST00000573123 DNAJC5BQ9UF47 199 aa36.97■■■■□ 3.51
CXCL16-202ENST00000573123 PABPN1Q86U42 306 aaKnown RBP eCLIP36.84■■■■□ 3.49
CXCL16-202ENST00000573123 UNC13AQ9UPW8 1703 aa36.73■■■■□ 3.47
CXCL16-202ENST00000573123 ZCCHC6Q5VYS8 1495 aaKnown RBP36.69■■■■□ 3.46
CXCL16-202ENST00000573123 DCAF1Q9Y4B6 1507 aa36.58■■■■□ 3.45
CXCL16-202ENST00000573123 BICRAQ9NZM4 1560 aa36.56■■■■□ 3.44
CXCL16-202ENST00000573123 SHROOM4Q9ULL8 1493 aa36.24■■■■□ 3.39
CXCL16-202ENST00000573123 SCRIBQ14160 1630 aa36.12■■■■□ 3.37
CXCL16-202ENST00000573123 CC2D2AQ9P2K1 1620 aa35.74■■■■□ 3.31
CXCL16-202ENST00000573123 EIF4G1Q04637 1599 aaKnown RBP35.71■■■■□ 3.31
CXCL16-202ENST00000573123 CECR2Q9BXF3 1484 aa35.68■■■■□ 3.3
CXCL16-202ENST00000573123 NCAPD3P42695 1498 aa34.62■■■■□ 3.13
CXCL16-202ENST00000573123 ATAD2BQ9ULI0 1458 aa34.51■■■■□ 3.11
CXCL16-202ENST00000573123 SMARCA4P51532 1647 aa34.48■■■■□ 3.11
CXCL16-202ENST00000573123 SMARCA2P51531 1590 aa34.45■■■■□ 3.11
CXCL16-202ENST00000573123 HMGXB3Q12766 1538 aa34.39■■■■□ 3.1
CXCL16-202ENST00000573123 BAZ1AQ9NRL2 1556 aaPredicted RBP34.36■■■■□ 3.09
CXCL16-202ENST00000573123 ERCC6Q03468 1493 aa34.24■■■■□ 3.07
CXCL16-202ENST00000573123 BAZ1BQ9UIG0 1483 aaKnown RBP34.21■■■■□ 3.07
CXCL16-202ENST00000573123 PEG3Q9GZU2 1588 aa34.16■■■■□ 3.06
CXCL16-202ENST00000573123 CUX2O14529 1486 aa34.15■■■■□ 3.06
CXCL16-202ENST00000573123 MROH2BQ7Z745 1585 aa34.04■■■■□ 3.04
CXCL16-202ENST00000573123 DNAJC5Q9H3Z4 198 aa33.99■■■■□ 3.03
CXCL16-202ENST00000573123 NESP48681 1621 aa33.98■■■■□ 3.03
CXCL16-202ENST00000573123 LAMC3Q9Y6N6 1575 aa33.83■■■■□ 3.01
CXCL16-202ENST00000573123 PDS5BQ9NTI5 1447 aa33.68■■■□□ 2.98
CXCL16-202ENST00000573123 THOC2Q8NI27 1593 aaKnown RBP33.65■■■□□ 2.98
CXCL16-202ENST00000573123 WIZO95785 1651 aa33.61■■■□□ 2.97
CXCL16-202ENST00000573123 CADPSQ9ULU8 1353 aa33.58■■■□□ 2.97
CXCL16-202ENST00000573123 KIF21AQ7Z4S6 1674 aa33.53■■■□□ 2.96
CXCL16-202ENST00000573123 RSF1Q96T23 1441 aaPredicted RBP33.39■■■□□ 2.94
CXCL16-202ENST00000573123 MRC2Q9UBG0 1479 aa33.36■■■□□ 2.93
CXCL16-202ENST00000573123 TOP2AP11388 1531 aaKnown RBP33.28■■■□□ 2.92
CXCL16-202ENST00000573123 WDR62O43379 1518 aa33.25■■■□□ 2.91
CXCL16-202ENST00000573123 CEP164Q9UPV0 1460 aa33.24■■■□□ 2.91
CXCL16-202ENST00000573123 CFTRP13569 1480 aa33.2■■■□□ 2.91
CXCL16-202ENST00000573123 FANCD2Q9BXW9 1451 aa33.19■■■□□ 2.9
CXCL16-202ENST00000573123 URB2Q14146 1524 aaKnown RBP32.87■■■□□ 2.85
CXCL16-202ENST00000573123 CCDC88BA6NC98 1476 aa32.86■■■□□ 2.85
CXCL16-202ENST00000573123 PRDM2Q13029 1718 aa32.81■■■□□ 2.84
CXCL16-202ENST00000573123 IFT140Q96RY7 1462 aa32.59■■■□□ 2.81
CXCL16-202ENST00000573123 OSCARQ8IYS5 282 aa32.58■■■□□ 2.81
CXCL16-202ENST00000573123 TOPBP1Q92547 1522 aa32.56■■■□□ 2.8
CXCL16-202ENST00000573123 ABCC8Q09428 1581 aa32.55■■■□□ 2.8
CXCL16-202ENST00000573123 TRIM41Q8WV44 630 aa32.53■■■□□ 2.8
CXCL16-202ENST00000573123 DNMBPQ6XZF7 1577 aa32.46■■■□□ 2.79
CXCL16-202ENST00000573123 ZNF608Q9ULD9 1512 aaPredicted RBP32.45■■■□□ 2.78
CXCL16-202ENST00000573123 EIF4G3O43432 1585 aaKnown RBP32.29■■■□□ 2.76
CXCL16-202ENST00000573123 POLA1P09884 1462 aaPredicted RBP32.23■■■□□ 2.75
CXCL16-202ENST00000573123 TARBP1Q13395 1621 aaKnown RBP32.22■■■□□ 2.75
CXCL16-202ENST00000573123 AQRO60306 1485 aaKnown RBP eCLIP32.17■■■□□ 2.74
CXCL16-202ENST00000573123 SOGA1O94964 1423 aa32.09■■■□□ 2.73
CXCL16-202ENST00000573123 RIMBP3CA6NJZ7 1639 aa32.09■■■□□ 2.73
CXCL16-202ENST00000573123 RIMBP3BA6NNM3 1639 aa32.09■■■□□ 2.73
CXCL16-202ENST00000573123 RIMBP3Q9UFD9 1639 aa32.09■■■□□ 2.73
CXCL16-202ENST00000573123 RAD54L2Q9Y4B4 1467 aa32.08■■■□□ 2.73
CXCL16-202ENST00000573123 ARHGEF11O15085 1522 aa32.04■■■□□ 2.72
CXCL16-202ENST00000573123 FGD5Q6ZNL6 1462 aa32.03■■■□□ 2.72
CXCL16-202ENST00000573123 WDR97A6NE52 1622 aa32■■■□□ 2.71
CXCL16-202ENST00000573123 TDRD9Q8NDG6 1382 aaKnown RBP32■■■□□ 2.71
CXCL16-202ENST00000573123 FBLN2P98095 1184 aa31.99■■■□□ 2.71
CXCL16-202ENST00000573123 CHD1O14646 1710 aa31.99■■■□□ 2.71
CXCL16-202ENST00000573123 CUX1P39880 1505 aa31.99■■■□□ 2.71
CXCL16-202ENST00000573123 SUPT5HO00267 1087 aaKnown RBP31.97■■■□□ 2.71
CXCL16-202ENST00000573123 SNAPC4Q5SXM2 1469 aa31.88■■■□□ 2.69
CXCL16-202ENST00000573123 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
CXCL16-202ENST00000573123 MAGI1Q96QZ7 1491 aaPredicted RBP31.84■■■□□ 2.69
CXCL16-202ENST00000573123 CHMP7Q8WUX9 453 aaPredicted RBP31.79■■■□□ 2.68
CXCL16-202ENST00000573123 CYB5RLQ6IPT4 315 aa31.78■■■□□ 2.68
CXCL16-202ENST00000573123 SYNJ1O43426 1573 aa31.72■■■□□ 2.67
CXCL16-202ENST00000573123 SYNJ2O15056 1496 aa31.72■■■□□ 2.67
CXCL16-202ENST00000573123 ARAP1Q96P48 1450 aa31.72■■■□□ 2.67
CXCL16-202ENST00000573123 GAPVD1Q14C86 1478 aa31.71■■■□□ 2.67
CXCL16-202ENST00000573123 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.67
CXCL16-202ENST00000573123 CLASP1Q7Z460 1538 aa31.68■■■□□ 2.66
CXCL16-202ENST00000573123 PBRM1Q86U86 1689 aa31.64■■■□□ 2.65
CXCL16-202ENST00000573123 ABCA5Q8WWZ7 1642 aa31.61■■■□□ 2.65
CXCL16-202ENST00000573123 WRNQ14191 1432 aaPredicted RBP eCLIP31.61■■■□□ 2.65
CXCL16-202ENST00000573123 TOP2BQ02880 1626 aa31.53■■■□□ 2.64
CXCL16-202ENST00000573123 BIVM-ERCC5R4GMW8 1640 aa31.5■■■□□ 2.63
CXCL16-202ENST00000573123 TRHP20396 242 aaPredicted RBP31.44■■■□□ 2.62
CXCL16-202ENST00000573123 GRIN2AQ12879 1464 aa31.4■■■□□ 2.62
CXCL16-202ENST00000573123 ADAMTS12P58397 1594 aa31.39■■■□□ 2.62
CXCL16-202ENST00000573123 FHAD1B1AJZ9 1412 aa31.34■■■□□ 2.61
CXCL16-202ENST00000573123 ERICH3Q5RHP9 1530 aa31.31■■■□□ 2.6
CXCL16-202ENST00000573123 NUP160Q12769 1436 aa31.3■■■□□ 2.6
CXCL16-202ENST00000573123 CEP170Q5SW79 1584 aa31.25■■■□□ 2.59
CXCL16-202ENST00000573123 ERCC6L2Q5T890 1561 aa31.13■■■□□ 2.57
CXCL16-202ENST00000573123 SHROOM2Q13796 1616 aa31.11■■■□□ 2.57
CXCL16-202ENST00000573123 PRG4Q92954 1404 aaPredicted RBP30.99■■■□□ 2.55
CXCL16-202ENST00000573123 KIF27Q86VH2 1401 aa30.97■■■□□ 2.55
CXCL16-202ENST00000573123 JPH4Q96JJ6 628 aa30.96■■■□□ 2.55
CXCL16-202ENST00000573123 RUSC2Q8N2Y8 1516 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms