RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 NISCHQ9Y2I1 1504 aa30.49■■■□□ 2.47
TRIM25-207ENST00000573108 ABCC9O60706 1549 aa27.56■■■□□ 2
TRIM25-207ENST00000573108 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
TRIM25-207ENST00000573108 RB1CC1Q8TDY2 1594 aa26.14■■□□□ 1.78
TRIM25-207ENST00000573108 DNAJC5BQ9UF47 199 aa25.97■■□□□ 1.75
TRIM25-207ENST00000573108 NACADO15069 1562 aa25.92■■□□□ 1.74
TRIM25-207ENST00000573108 DCAF8L2P0C7V8 631 aa25.79■■□□□ 1.72
TRIM25-207ENST00000573108 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.69
TRIM25-207ENST00000573108 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
TRIM25-207ENST00000573108 MYO15BQ96JP2 1530 aa25.5■■□□□ 1.67
TRIM25-207ENST00000573108 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
TRIM25-207ENST00000573108 ZCCHC6Q5VYS8 1495 aaKnown RBP25.25■■□□□ 1.63
TRIM25-207ENST00000573108 DCAF1Q9Y4B6 1507 aa25.15■■□□□ 1.62
TRIM25-207ENST00000573108 SCRIBQ14160 1630 aa25.01■■□□□ 1.59
TRIM25-207ENST00000573108 SHROOM4Q9ULL8 1493 aa24.98■■□□□ 1.59
TRIM25-207ENST00000573108 CC2D2AQ9P2K1 1620 aa24.89■■□□□ 1.57
TRIM25-207ENST00000573108 CECR2Q9BXF3 1484 aa24.81■■□□□ 1.56
TRIM25-207ENST00000573108 EIF4G1Q04637 1599 aaKnown RBP24.8■■□□□ 1.56
TRIM25-207ENST00000573108 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
TRIM25-207ENST00000573108 DNAJC5Q9H3Z4 198 aa23.88■■□□□ 1.41
TRIM25-207ENST00000573108 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
TRIM25-207ENST00000573108 SMARCA4P51532 1647 aa23.83■■□□□ 1.41
TRIM25-207ENST00000573108 SMARCA2P51531 1590 aa23.77■■□□□ 1.4
TRIM25-207ENST00000573108 ERCC6Q03468 1493 aa23.76■■□□□ 1.39
TRIM25-207ENST00000573108 HMGXB3Q12766 1538 aa23.75■■□□□ 1.39
TRIM25-207ENST00000573108 CUX2O14529 1486 aa23.75■■□□□ 1.39
TRIM25-207ENST00000573108 NESP48681 1621 aa23.66■■□□□ 1.38
TRIM25-207ENST00000573108 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
TRIM25-207ENST00000573108 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
TRIM25-207ENST00000573108 PEG3Q9GZU2 1588 aa23.57■■□□□ 1.36
TRIM25-207ENST00000573108 MROH2BQ7Z745 1585 aa23.52■■□□□ 1.36
TRIM25-207ENST00000573108 THOC2Q8NI27 1593 aaKnown RBP23.44■■□□□ 1.34
TRIM25-207ENST00000573108 LAMC3Q9Y6N6 1575 aa23.42■■□□□ 1.34
TRIM25-207ENST00000573108 KIF21AQ7Z4S6 1674 aa23.36■■□□□ 1.33
TRIM25-207ENST00000573108 PDS5BQ9NTI5 1447 aa23.26■■□□□ 1.31
TRIM25-207ENST00000573108 WIZO95785 1651 aa23.25■■□□□ 1.31
TRIM25-207ENST00000573108 CADPSQ9ULU8 1353 aa23.2■■□□□ 1.3
TRIM25-207ENST00000573108 MRC2Q9UBG0 1479 aa23.1■■□□□ 1.29
TRIM25-207ENST00000573108 WDR62O43379 1518 aa23.06■■□□□ 1.28
TRIM25-207ENST00000573108 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
TRIM25-207ENST00000573108 RSF1Q96T23 1441 aaPredicted RBP22.97■■□□□ 1.27
TRIM25-207ENST00000573108 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.26
TRIM25-207ENST00000573108 CFTRP13569 1480 aa22.92■■□□□ 1.26
TRIM25-207ENST00000573108 TOP2AP11388 1531 aaKnown RBP22.91■■□□□ 1.26
TRIM25-207ENST00000573108 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
TRIM25-207ENST00000573108 URB2Q14146 1524 aaKnown RBP22.8■■□□□ 1.24
TRIM25-207ENST00000573108 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
TRIM25-207ENST00000573108 CCDC88BA6NC98 1476 aa22.66■■□□□ 1.22
TRIM25-207ENST00000573108 OSCARQ8IYS5 282 aa22.63■■□□□ 1.21
TRIM25-207ENST00000573108 ZNF608Q9ULD9 1512 aaPredicted RBP22.54■■□□□ 1.2
TRIM25-207ENST00000573108 IFT140Q96RY7 1462 aa22.52■■□□□ 1.2
TRIM25-207ENST00000573108 TOPBP1Q92547 1522 aa22.52■■□□□ 1.19
TRIM25-207ENST00000573108 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
TRIM25-207ENST00000573108 RIMBP3CA6NJZ7 1639 aa22.42■■□□□ 1.18
TRIM25-207ENST00000573108 RIMBP3BA6NNM3 1639 aa22.42■■□□□ 1.18
TRIM25-207ENST00000573108 RIMBP3Q9UFD9 1639 aa22.42■■□□□ 1.18
TRIM25-207ENST00000573108 EIF4G3O43432 1585 aaKnown RBP22.42■■□□□ 1.18
TRIM25-207ENST00000573108 ABCC8Q09428 1581 aa22.4■■□□□ 1.18
TRIM25-207ENST00000573108 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
TRIM25-207ENST00000573108 AQRO60306 1485 aaKnown RBP eCLIP22.32■■□□□ 1.16
TRIM25-207ENST00000573108 ARHGEF11O15085 1522 aa22.31■■□□□ 1.16
TRIM25-207ENST00000573108 CHD1O14646 1710 aa22.28■■□□□ 1.16
TRIM25-207ENST00000573108 POLA1P09884 1462 aaPredicted RBP22.28■■□□□ 1.16
TRIM25-207ENST00000573108 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
TRIM25-207ENST00000573108 FBLN2P98095 1184 aa22.17■■□□□ 1.14
TRIM25-207ENST00000573108 SOGA1O94964 1423 aa22.15■■□□□ 1.14
TRIM25-207ENST00000573108 TDRD9Q8NDG6 1382 aaKnown RBP22.14■■□□□ 1.14
TRIM25-207ENST00000573108 CYB5RLQ6IPT4 315 aa22.14■■□□□ 1.13
TRIM25-207ENST00000573108 FGD5Q6ZNL6 1462 aa22.13■■□□□ 1.13
TRIM25-207ENST00000573108 CUX1P39880 1505 aa22.11■■□□□ 1.13
TRIM25-207ENST00000573108 ARAP1Q96P48 1450 aa22.1■■□□□ 1.13
TRIM25-207ENST00000573108 SNAPC4Q5SXM2 1469 aa22.08■■□□□ 1.12
TRIM25-207ENST00000573108 WDR97A6NE52 1622 aa22.05■■□□□ 1.12
TRIM25-207ENST00000573108 CLASP1Q7Z460 1538 aa22■■□□□ 1.11
TRIM25-207ENST00000573108 MAGI1Q96QZ7 1491 aaPredicted RBP21.98■■□□□ 1.11
TRIM25-207ENST00000573108 GRIN2BQ13224 1484 aa21.97■■□□□ 1.11
TRIM25-207ENST00000573108 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
TRIM25-207ENST00000573108 SYNJ1O43426 1573 aa21.95■■□□□ 1.1
TRIM25-207ENST00000573108 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
TRIM25-207ENST00000573108 PBRM1Q86U86 1689 aa21.93■■□□□ 1.1
TRIM25-207ENST00000573108 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
TRIM25-207ENST00000573108 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
TRIM25-207ENST00000573108 SUPT5HO00267 1087 aaKnown RBP21.87■■□□□ 1.09
TRIM25-207ENST00000573108 ABCA5Q8WWZ7 1642 aa21.85■■□□□ 1.09
TRIM25-207ENST00000573108 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
TRIM25-207ENST00000573108 BIVM-ERCC5R4GMW8 1640 aa21.72■■□□□ 1.07
TRIM25-207ENST00000573108 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
TRIM25-207ENST00000573108 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
TRIM25-207ENST00000573108 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
TRIM25-207ENST00000573108 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
TRIM25-207ENST00000573108 ERCC6L2Q5T890 1561 aa21.69■■□□□ 1.06
TRIM25-207ENST00000573108 CEP170Q5SW79 1584 aa21.66■■□□□ 1.06
TRIM25-207ENST00000573108 AEBP2Q6ZN18 517 aaPredicted RBP21.64■■□□□ 1.05
TRIM25-207ENST00000573108 NUP160Q12769 1436 aa21.63■■□□□ 1.05
TRIM25-207ENST00000573108 FHAD1B1AJZ9 1412 aa21.59■■□□□ 1.05
TRIM25-207ENST00000573108 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
TRIM25-207ENST00000573108 SHROOM2Q13796 1616 aa21.57■■□□□ 1.04
TRIM25-207ENST00000573108 PRG4Q92954 1404 aaPredicted RBP21.44■■□□□ 1.02
TRIM25-207ENST00000573108 RUSC2Q8N2Y8 1516 aa21.4■■□□□ 1.02
TRIM25-207ENST00000573108 JPH4Q96JJ6 628 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms