RNA–Protein interactions for RNA: ENST00000573106.1

SPNS2-206, Transcript of sphingolipid transporter 2, humanhuman

TSL 3

Gene SPNS2, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-206ENST00000573106 NISCHQ9Y2I1 1504 aa38.8■■■■□ 3.8
SPNS2-206ENST00000573106 ABCC9O60706 1549 aa34.7■■■■□ 3.14
SPNS2-206ENST00000573106 CCDC180Q9P1Z9 1646 aa34.63■■■■□ 3.13
SPNS2-206ENST00000573106 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
SPNS2-206ENST00000573106 DCAF8L2P0C7V8 631 aa32.81■■■□□ 2.84
SPNS2-206ENST00000573106 NACADO15069 1562 aa32.77■■■□□ 2.84
SPNS2-206ENST00000573106 DNAJC5BQ9UF47 199 aa32.5■■■□□ 2.79
SPNS2-206ENST00000573106 PABPN1Q86U42 306 aaKnown RBP eCLIP32.4■■■□□ 2.78
SPNS2-206ENST00000573106 MYO15BQ96JP2 1530 aa32.36■■■□□ 2.77
SPNS2-206ENST00000573106 ZCCHC6Q5VYS8 1495 aaKnown RBP32.2■■■□□ 2.75
SPNS2-206ENST00000573106 UNC13AQ9UPW8 1703 aa32.11■■■□□ 2.73
SPNS2-206ENST00000573106 BICRAQ9NZM4 1560 aa32.04■■■□□ 2.72
SPNS2-206ENST00000573106 DCAF1Q9Y4B6 1507 aa32■■■□□ 2.71
SPNS2-206ENST00000573106 SCRIBQ14160 1630 aa31.7■■■□□ 2.66
SPNS2-206ENST00000573106 SHROOM4Q9ULL8 1493 aa31.56■■■□□ 2.64
SPNS2-206ENST00000573106 CC2D2AQ9P2K1 1620 aa31.27■■■□□ 2.6
SPNS2-206ENST00000573106 EIF4G1Q04637 1599 aaKnown RBP31.24■■■□□ 2.59
SPNS2-206ENST00000573106 CECR2Q9BXF3 1484 aa31.21■■■□□ 2.59
SPNS2-206ENST00000573106 NCAPD3P42695 1498 aa30.31■■■□□ 2.44
SPNS2-206ENST00000573106 ATAD2BQ9ULI0 1458 aa30.26■■■□□ 2.44
SPNS2-206ENST00000573106 SMARCA4P51532 1647 aa30.2■■■□□ 2.43
SPNS2-206ENST00000573106 SMARCA2P51531 1590 aa30.11■■■□□ 2.41
SPNS2-206ENST00000573106 BAZ1AQ9NRL2 1556 aaPredicted RBP30.07■■■□□ 2.4
SPNS2-206ENST00000573106 HMGXB3Q12766 1538 aa30.05■■■□□ 2.4
SPNS2-206ENST00000573106 BAZ1BQ9UIG0 1483 aaKnown RBP29.96■■■□□ 2.39
SPNS2-206ENST00000573106 MROH2BQ7Z745 1585 aa29.94■■■□□ 2.38
SPNS2-206ENST00000573106 ERCC6Q03468 1493 aa29.92■■■□□ 2.38
SPNS2-206ENST00000573106 PEG3Q9GZU2 1588 aa29.89■■■□□ 2.38
SPNS2-206ENST00000573106 NESP48681 1621 aa29.85■■■□□ 2.37
SPNS2-206ENST00000573106 CUX2O14529 1486 aa29.76■■■□□ 2.35
SPNS2-206ENST00000573106 DNAJC5Q9H3Z4 198 aa29.67■■■□□ 2.34
SPNS2-206ENST00000573106 LAMC3Q9Y6N6 1575 aa29.54■■■□□ 2.32
SPNS2-206ENST00000573106 WIZO95785 1651 aa29.53■■■□□ 2.32
SPNS2-206ENST00000573106 CADPSQ9ULU8 1353 aa29.43■■■□□ 2.3
SPNS2-206ENST00000573106 PDS5BQ9NTI5 1447 aa29.43■■■□□ 2.3
SPNS2-206ENST00000573106 THOC2Q8NI27 1593 aaKnown RBP29.42■■■□□ 2.3
SPNS2-206ENST00000573106 RSF1Q96T23 1441 aaPredicted RBP29.39■■■□□ 2.3
SPNS2-206ENST00000573106 KIF21AQ7Z4S6 1674 aa29.32■■■□□ 2.28
SPNS2-206ENST00000573106 TOP2AP11388 1531 aaKnown RBP29.18■■■□□ 2.26
SPNS2-206ENST00000573106 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
SPNS2-206ENST00000573106 CFTRP13569 1480 aa29.1■■■□□ 2.25
SPNS2-206ENST00000573106 FANCD2Q9BXW9 1451 aa29.09■■■□□ 2.25
SPNS2-206ENST00000573106 CEP164Q9UPV0 1460 aa29.08■■■□□ 2.25
SPNS2-206ENST00000573106 WDR62O43379 1518 aa29.07■■■□□ 2.24
SPNS2-206ENST00000573106 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
SPNS2-206ENST00000573106 URB2Q14146 1524 aaKnown RBP28.85■■■□□ 2.21
SPNS2-206ENST00000573106 PRDM2Q13029 1718 aa28.59■■■□□ 2.17
SPNS2-206ENST00000573106 TOPBP1Q92547 1522 aa28.54■■■□□ 2.16
SPNS2-206ENST00000573106 ZNF608Q9ULD9 1512 aaPredicted RBP28.5■■■□□ 2.15
SPNS2-206ENST00000573106 IFT140Q96RY7 1462 aa28.5■■■□□ 2.15
SPNS2-206ENST00000573106 OSCARQ8IYS5 282 aa28.49■■■□□ 2.15
SPNS2-206ENST00000573106 TRIM41Q8WV44 630 aa28.48■■■□□ 2.15
SPNS2-206ENST00000573106 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
SPNS2-206ENST00000573106 DNMBPQ6XZF7 1577 aa28.41■■■□□ 2.14
SPNS2-206ENST00000573106 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
SPNS2-206ENST00000573106 AQRO60306 1485 aaKnown RBP eCLIP28.27■■■□□ 2.12
SPNS2-206ENST00000573106 EIF4G3O43432 1585 aaKnown RBP28.26■■■□□ 2.11
SPNS2-206ENST00000573106 SUPT5HO00267 1087 aaKnown RBP28.26■■■□□ 2.11
SPNS2-206ENST00000573106 TARBP1Q13395 1621 aaKnown RBP28.23■■■□□ 2.11
SPNS2-206ENST00000573106 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
SPNS2-206ENST00000573106 SOGA1O94964 1423 aa28.16■■■□□ 2.1
SPNS2-206ENST00000573106 TDRD9Q8NDG6 1382 aaKnown RBP28.13■■■□□ 2.09
SPNS2-206ENST00000573106 FGD5Q6ZNL6 1462 aa28.12■■■□□ 2.09
SPNS2-206ENST00000573106 CUX1P39880 1505 aa28.11■■■□□ 2.09
SPNS2-206ENST00000573106 FBLN2P98095 1184 aa28.07■■■□□ 2.08
SPNS2-206ENST00000573106 RIMBP3CA6NJZ7 1639 aa28.03■■■□□ 2.08
SPNS2-206ENST00000573106 RIMBP3BA6NNM3 1639 aa28.03■■■□□ 2.08
SPNS2-206ENST00000573106 RIMBP3Q9UFD9 1639 aa28.03■■■□□ 2.08
SPNS2-206ENST00000573106 ARHGEF11O15085 1522 aa28■■■□□ 2.07
SPNS2-206ENST00000573106 SNAPC4Q5SXM2 1469 aa27.95■■■□□ 2.07
SPNS2-206ENST00000573106 CHD1O14646 1710 aa27.95■■■□□ 2.07
SPNS2-206ENST00000573106 WDR97A6NE52 1622 aa27.88■■■□□ 2.05
SPNS2-206ENST00000573106 GRIN2BQ13224 1484 aa27.87■■■□□ 2.05
SPNS2-206ENST00000573106 CYB5RLQ6IPT4 315 aa27.86■■■□□ 2.05
SPNS2-206ENST00000573106 CHMP7Q8WUX9 453 aaPredicted RBP27.86■■■□□ 2.05
SPNS2-206ENST00000573106 MAGI1Q96QZ7 1491 aaPredicted RBP27.83■■■□□ 2.05
SPNS2-206ENST00000573106 GAPVD1Q14C86 1478 aa27.79■■■□□ 2.04
SPNS2-206ENST00000573106 ABCA10Q8WWZ4 1543 aa27.78■■■□□ 2.04
SPNS2-206ENST00000573106 ARAP1Q96P48 1450 aa27.77■■■□□ 2.04
SPNS2-206ENST00000573106 SYNJ2O15056 1496 aa27.76■■■□□ 2.03
SPNS2-206ENST00000573106 CLASP1Q7Z460 1538 aa27.72■■■□□ 2.03
SPNS2-206ENST00000573106 WRNQ14191 1432 aaPredicted RBP eCLIP27.72■■■□□ 2.03
SPNS2-206ENST00000573106 ABCA5Q8WWZ7 1642 aa27.69■■■□□ 2.02
SPNS2-206ENST00000573106 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
SPNS2-206ENST00000573106 PBRM1Q86U86 1689 aa27.65■■■□□ 2.02
SPNS2-206ENST00000573106 TOP2BQ02880 1626 aa27.63■■■□□ 2.01
SPNS2-206ENST00000573106 BIVM-ERCC5R4GMW8 1640 aa27.59■■■□□ 2.01
SPNS2-206ENST00000573106 GRIN2AQ12879 1464 aa27.51■■■□□ 2
SPNS2-206ENST00000573106 TRHP20396 242 aaPredicted RBP27.5■■□□□ 1.99
SPNS2-206ENST00000573106 ADAMTS12P58397 1594 aa27.49■■□□□ 1.99
SPNS2-206ENST00000573106 FHAD1B1AJZ9 1412 aa27.45■■□□□ 1.98
SPNS2-206ENST00000573106 NUP160Q12769 1436 aa27.42■■□□□ 1.98
SPNS2-206ENST00000573106 CEP170Q5SW79 1584 aa27.41■■□□□ 1.98
SPNS2-206ENST00000573106 ERICH3Q5RHP9 1530 aa27.4■■□□□ 1.98
SPNS2-206ENST00000573106 ERCC6L2Q5T890 1561 aa27.36■■□□□ 1.97
SPNS2-206ENST00000573106 SHROOM2Q13796 1616 aa27.21■■□□□ 1.95
SPNS2-206ENST00000573106 JPH4Q96JJ6 628 aa27.18■■□□□ 1.94
SPNS2-206ENST00000573106 IGF1RP08069 1367 aa27.18■■□□□ 1.94
SPNS2-206ENST00000573106 PRG4Q92954 1404 aaPredicted RBP27.17■■□□□ 1.94
SPNS2-206ENST00000573106 KIF27Q86VH2 1401 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms