RNA–Protein interactions for RNA: ENST00000572975.1

STRA6-213, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 5

Gene STRA6, Length 795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-213ENST00000572975 NISCHQ9Y2I1 1504 aa32.82■■■□□ 2.84
STRA6-213ENST00000572975 CCDC180Q9P1Z9 1646 aa29.32■■■□□ 2.28
STRA6-213ENST00000572975 ABCC9O60706 1549 aa29.11■■■□□ 2.25
STRA6-213ENST00000572975 RB1CC1Q8TDY2 1594 aa27.82■■■□□ 2.04
STRA6-213ENST00000572975 DCAF8L2P0C7V8 631 aa27.76■■■□□ 2.03
STRA6-213ENST00000572975 NACADO15069 1562 aa27.67■■■□□ 2.02
STRA6-213ENST00000572975 MYO15BQ96JP2 1530 aa27.33■■□□□ 1.97
STRA6-213ENST00000572975 ZCCHC6Q5VYS8 1495 aaKnown RBP27.22■■□□□ 1.95
STRA6-213ENST00000572975 PABPN1Q86U42 306 aaKnown RBP eCLIP27.19■■□□□ 1.94
STRA6-213ENST00000572975 UNC13AQ9UPW8 1703 aa27.18■■□□□ 1.94
STRA6-213ENST00000572975 DCAF1Q9Y4B6 1507 aa27.09■■□□□ 1.93
STRA6-213ENST00000572975 DNAJC5BQ9UF47 199 aa27.05■■□□□ 1.92
STRA6-213ENST00000572975 BICRAQ9NZM4 1560 aa26.93■■□□□ 1.9
STRA6-213ENST00000572975 SCRIBQ14160 1630 aa26.78■■□□□ 1.88
STRA6-213ENST00000572975 SHROOM4Q9ULL8 1493 aa26.6■■□□□ 1.85
STRA6-213ENST00000572975 CC2D2AQ9P2K1 1620 aa26.29■■□□□ 1.8
STRA6-213ENST00000572975 EIF4G1Q04637 1599 aaKnown RBP26.29■■□□□ 1.8
STRA6-213ENST00000572975 CECR2Q9BXF3 1484 aa26.19■■□□□ 1.78
STRA6-213ENST00000572975 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
STRA6-213ENST00000572975 NCAPD3P42695 1498 aa25.53■■□□□ 1.68
STRA6-213ENST00000572975 ATAD2BQ9ULI0 1458 aa25.49■■□□□ 1.67
STRA6-213ENST00000572975 BAZ1AQ9NRL2 1556 aaPredicted RBP25.47■■□□□ 1.67
STRA6-213ENST00000572975 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
STRA6-213ENST00000572975 HMGXB3Q12766 1538 aa25.35■■□□□ 1.65
STRA6-213ENST00000572975 BAZ1BQ9UIG0 1483 aaKnown RBP25.3■■□□□ 1.64
STRA6-213ENST00000572975 MROH2BQ7Z745 1585 aa25.28■■□□□ 1.64
STRA6-213ENST00000572975 PEG3Q9GZU2 1588 aa25.25■■□□□ 1.63
STRA6-213ENST00000572975 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
STRA6-213ENST00000572975 NESP48681 1621 aa25.06■■□□□ 1.6
STRA6-213ENST00000572975 WIZO95785 1651 aa25.02■■□□□ 1.6
STRA6-213ENST00000572975 CUX2O14529 1486 aa24.95■■□□□ 1.58
STRA6-213ENST00000572975 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
STRA6-213ENST00000572975 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
STRA6-213ENST00000572975 PDS5BQ9NTI5 1447 aa24.82■■□□□ 1.56
STRA6-213ENST00000572975 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
STRA6-213ENST00000572975 KIF21AQ7Z4S6 1674 aa24.76■■□□□ 1.55
STRA6-213ENST00000572975 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
STRA6-213ENST00000572975 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
STRA6-213ENST00000572975 DNAJC5Q9H3Z4 198 aa24.67■■□□□ 1.54
STRA6-213ENST00000572975 MRC2Q9UBG0 1479 aa24.55■■□□□ 1.52
STRA6-213ENST00000572975 CFTRP13569 1480 aa24.54■■□□□ 1.52
STRA6-213ENST00000572975 CEP164Q9UPV0 1460 aa24.52■■□□□ 1.52
STRA6-213ENST00000572975 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
STRA6-213ENST00000572975 WDR62O43379 1518 aa24.45■■□□□ 1.51
STRA6-213ENST00000572975 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.5
STRA6-213ENST00000572975 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
STRA6-213ENST00000572975 URB2Q14146 1524 aaKnown RBP24.27■■□□□ 1.48
STRA6-213ENST00000572975 SUPT5HO00267 1087 aaKnown RBP24.1■■□□□ 1.45
STRA6-213ENST00000572975 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
STRA6-213ENST00000572975 ABCC8Q09428 1581 aa24.07■■□□□ 1.44
STRA6-213ENST00000572975 IFT140Q96RY7 1462 aa24.02■■□□□ 1.44
STRA6-213ENST00000572975 DNMBPQ6XZF7 1577 aa24.01■■□□□ 1.43
STRA6-213ENST00000572975 OSCARQ8IYS5 282 aa23.94■■□□□ 1.42
STRA6-213ENST00000572975 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
STRA6-213ENST00000572975 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.41
STRA6-213ENST00000572975 EIF4G3O43432 1585 aaKnown RBP23.82■■□□□ 1.4
STRA6-213ENST00000572975 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
STRA6-213ENST00000572975 AQRO60306 1485 aaKnown RBP eCLIP23.79■■□□□ 1.4
STRA6-213ENST00000572975 SOGA1O94964 1423 aa23.78■■□□□ 1.4
STRA6-213ENST00000572975 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
STRA6-213ENST00000572975 RAD54L2Q9Y4B4 1467 aa23.77■■□□□ 1.4
STRA6-213ENST00000572975 FGD5Q6ZNL6 1462 aa23.74■■□□□ 1.39
STRA6-213ENST00000572975 CUX1P39880 1505 aa23.74■■□□□ 1.39
STRA6-213ENST00000572975 TDRD9Q8NDG6 1382 aaKnown RBP23.7■■□□□ 1.38
STRA6-213ENST00000572975 FBLN2P98095 1184 aa23.68■■□□□ 1.38
STRA6-213ENST00000572975 CHD1O14646 1710 aa23.62■■□□□ 1.37
STRA6-213ENST00000572975 WDR97A6NE52 1622 aa23.59■■□□□ 1.37
STRA6-213ENST00000572975 RIMBP3CA6NJZ7 1639 aa23.54■■□□□ 1.36
STRA6-213ENST00000572975 RIMBP3BA6NNM3 1639 aa23.54■■□□□ 1.36
STRA6-213ENST00000572975 RIMBP3Q9UFD9 1639 aa23.54■■□□□ 1.36
STRA6-213ENST00000572975 SNAPC4Q5SXM2 1469 aa23.54■■□□□ 1.36
STRA6-213ENST00000572975 GRIN2BQ13224 1484 aa23.52■■□□□ 1.36
STRA6-213ENST00000572975 CHMP7Q8WUX9 453 aaPredicted RBP23.52■■□□□ 1.36
STRA6-213ENST00000572975 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
STRA6-213ENST00000572975 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
STRA6-213ENST00000572975 MAGI1Q96QZ7 1491 aaPredicted RBP23.48■■□□□ 1.35
STRA6-213ENST00000572975 ARHGEF11O15085 1522 aa23.48■■□□□ 1.35
STRA6-213ENST00000572975 ABCA10Q8WWZ4 1543 aa23.47■■□□□ 1.35
STRA6-213ENST00000572975 PBRM1Q86U86 1689 aa23.45■■□□□ 1.34
STRA6-213ENST00000572975 TOP2BQ02880 1626 aa23.44■■□□□ 1.34
STRA6-213ENST00000572975 BIVM-ERCC5R4GMW8 1640 aa23.44■■□□□ 1.34
STRA6-213ENST00000572975 SYNJ1O43426 1573 aa23.42■■□□□ 1.34
STRA6-213ENST00000572975 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
STRA6-213ENST00000572975 ABCA5Q8WWZ7 1642 aa23.39■■□□□ 1.33
STRA6-213ENST00000572975 CYB5RLQ6IPT4 315 aa23.38■■□□□ 1.33
STRA6-213ENST00000572975 CLASP1Q7Z460 1538 aa23.3■■□□□ 1.32
STRA6-213ENST00000572975 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
STRA6-213ENST00000572975 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
STRA6-213ENST00000572975 GRIN2AQ12879 1464 aa23.2■■□□□ 1.3
STRA6-213ENST00000572975 FHAD1B1AJZ9 1412 aa23.19■■□□□ 1.3
STRA6-213ENST00000572975 ERICH3Q5RHP9 1530 aa23.18■■□□□ 1.3
STRA6-213ENST00000572975 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
STRA6-213ENST00000572975 NUP160Q12769 1436 aa23.08■■□□□ 1.29
STRA6-213ENST00000572975 TRHP20396 242 aaPredicted RBP23.08■■□□□ 1.29
STRA6-213ENST00000572975 KIF27Q86VH2 1401 aa23.04■■□□□ 1.28
STRA6-213ENST00000572975 ERCC6L2Q5T890 1561 aa22.97■■□□□ 1.27
STRA6-213ENST00000572975 IGF1RP08069 1367 aa22.97■■□□□ 1.27
STRA6-213ENST00000572975 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
STRA6-213ENST00000572975 JPH4Q96JJ6 628 aa22.94■■□□□ 1.26
STRA6-213ENST00000572975 CUL7Q14999 1698 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms