RNA–Protein interactions for RNA: ENST00000572866.1

RPH3AL-208, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 3

Gene RPH3AL, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-208ENST00000572866 NISCHQ9Y2I1 1504 aa42.53■■■■■ 4.4
RPH3AL-208ENST00000572866 CCDC180Q9P1Z9 1646 aa38.05■■■■□ 3.68
RPH3AL-208ENST00000572866 ABCC9O60706 1549 aa37.78■■■■□ 3.64
RPH3AL-208ENST00000572866 RB1CC1Q8TDY2 1594 aa36.12■■■■□ 3.37
RPH3AL-208ENST00000572866 NACADO15069 1562 aa35.96■■■■□ 3.35
RPH3AL-208ENST00000572866 DCAF8L2P0C7V8 631 aa35.72■■■■□ 3.31
RPH3AL-208ENST00000572866 MYO15BQ96JP2 1530 aa35.6■■■■□ 3.29
RPH3AL-208ENST00000572866 ZCCHC6Q5VYS8 1495 aaKnown RBP35.31■■■■□ 3.24
RPH3AL-208ENST00000572866 DNAJC5BQ9UF47 199 aa35.23■■■■□ 3.23
RPH3AL-208ENST00000572866 PABPN1Q86U42 306 aaKnown RBP eCLIP35.21■■■■□ 3.23
RPH3AL-208ENST00000572866 DCAF1Q9Y4B6 1507 aa35.21■■■■□ 3.23
RPH3AL-208ENST00000572866 UNC13AQ9UPW8 1703 aa35.18■■■■□ 3.22
RPH3AL-208ENST00000572866 BICRAQ9NZM4 1560 aa35.03■■■■□ 3.2
RPH3AL-208ENST00000572866 SHROOM4Q9ULL8 1493 aa34.71■■■■□ 3.15
RPH3AL-208ENST00000572866 SCRIBQ14160 1630 aa34.63■■■■□ 3.13
RPH3AL-208ENST00000572866 EIF4G1Q04637 1599 aaKnown RBP34.16■■■■□ 3.06
RPH3AL-208ENST00000572866 CC2D2AQ9P2K1 1620 aa34.15■■■■□ 3.06
RPH3AL-208ENST00000572866 CECR2Q9BXF3 1484 aa34.06■■■■□ 3.04
RPH3AL-208ENST00000572866 NCAPD3P42695 1498 aa33.21■■■□□ 2.91
RPH3AL-208ENST00000572866 ATAD2BQ9ULI0 1458 aa33.12■■■□□ 2.89
RPH3AL-208ENST00000572866 SMARCA4P51532 1647 aa33.1■■■□□ 2.89
RPH3AL-208ENST00000572866 SMARCA2P51531 1590 aa33.04■■■□□ 2.88
RPH3AL-208ENST00000572866 BAZ1AQ9NRL2 1556 aaPredicted RBP33.01■■■□□ 2.88
RPH3AL-208ENST00000572866 HMGXB3Q12766 1538 aa32.97■■■□□ 2.87
RPH3AL-208ENST00000572866 PEG3Q9GZU2 1588 aa32.83■■■□□ 2.85
RPH3AL-208ENST00000572866 BAZ1BQ9UIG0 1483 aaKnown RBP32.8■■■□□ 2.84
RPH3AL-208ENST00000572866 MROH2BQ7Z745 1585 aa32.74■■■□□ 2.83
RPH3AL-208ENST00000572866 ERCC6Q03468 1493 aa32.64■■■□□ 2.82
RPH3AL-208ENST00000572866 CUX2O14529 1486 aa32.55■■■□□ 2.8
RPH3AL-208ENST00000572866 NESP48681 1621 aa32.51■■■□□ 2.8
RPH3AL-208ENST00000572866 LAMC3Q9Y6N6 1575 aa32.39■■■□□ 2.78
RPH3AL-208ENST00000572866 WIZO95785 1651 aa32.31■■■□□ 2.76
RPH3AL-208ENST00000572866 DNAJC5Q9H3Z4 198 aa32.24■■■□□ 2.75
RPH3AL-208ENST00000572866 PDS5BQ9NTI5 1447 aa32.23■■■□□ 2.75
RPH3AL-208ENST00000572866 CADPSQ9ULU8 1353 aa32.2■■■□□ 2.75
RPH3AL-208ENST00000572866 RSF1Q96T23 1441 aaPredicted RBP32.18■■■□□ 2.74
RPH3AL-208ENST00000572866 THOC2Q8NI27 1593 aaKnown RBP32.16■■■□□ 2.74
RPH3AL-208ENST00000572866 KIF21AQ7Z4S6 1674 aa32.07■■■□□ 2.72
RPH3AL-208ENST00000572866 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
RPH3AL-208ENST00000572866 MRC2Q9UBG0 1479 aa31.91■■■□□ 2.7
RPH3AL-208ENST00000572866 CFTRP13569 1480 aa31.89■■■□□ 2.7
RPH3AL-208ENST00000572866 CEP164Q9UPV0 1460 aa31.83■■■□□ 2.69
RPH3AL-208ENST00000572866 WDR62O43379 1518 aa31.82■■■□□ 2.68
RPH3AL-208ENST00000572866 FANCD2Q9BXW9 1451 aa31.81■■■□□ 2.68
RPH3AL-208ENST00000572866 CCDC88BA6NC98 1476 aa31.62■■■□□ 2.65
RPH3AL-208ENST00000572866 URB2Q14146 1524 aaKnown RBP31.51■■■□□ 2.63
RPH3AL-208ENST00000572866 PRDM2Q13029 1718 aa31.48■■■□□ 2.63
RPH3AL-208ENST00000572866 ABCC8Q09428 1581 aa31.22■■■□□ 2.59
RPH3AL-208ENST00000572866 TOPBP1Q92547 1522 aa31.22■■■□□ 2.59
RPH3AL-208ENST00000572866 IFT140Q96RY7 1462 aa31.2■■■□□ 2.58
RPH3AL-208ENST00000572866 DNMBPQ6XZF7 1577 aa31.13■■■□□ 2.57
RPH3AL-208ENST00000572866 OSCARQ8IYS5 282 aa31.09■■■□□ 2.57
RPH3AL-208ENST00000572866 ZNF608Q9ULD9 1512 aaPredicted RBP31.07■■■□□ 2.56
RPH3AL-208ENST00000572866 POLA1P09884 1462 aaPredicted RBP30.93■■■□□ 2.54
RPH3AL-208ENST00000572866 EIF4G3O43432 1585 aaKnown RBP30.91■■■□□ 2.54
RPH3AL-208ENST00000572866 TARBP1Q13395 1621 aaKnown RBP30.91■■■□□ 2.54
RPH3AL-208ENST00000572866 SUPT5HO00267 1087 aaKnown RBP30.86■■■□□ 2.53
RPH3AL-208ENST00000572866 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
RPH3AL-208ENST00000572866 AQRO60306 1485 aaKnown RBP eCLIP30.82■■■□□ 2.53
RPH3AL-208ENST00000572866 SOGA1O94964 1423 aa30.79■■■□□ 2.52
RPH3AL-208ENST00000572866 RAD54L2Q9Y4B4 1467 aa30.77■■■□□ 2.52
RPH3AL-208ENST00000572866 CUX1P39880 1505 aa30.76■■■□□ 2.51
RPH3AL-208ENST00000572866 FGD5Q6ZNL6 1462 aa30.75■■■□□ 2.51
RPH3AL-208ENST00000572866 WDR97A6NE52 1622 aa30.69■■■□□ 2.5
RPH3AL-208ENST00000572866 TDRD9Q8NDG6 1382 aaKnown RBP30.67■■■□□ 2.5
RPH3AL-208ENST00000572866 RIMBP3CA6NJZ7 1639 aa30.58■■■□□ 2.49
RPH3AL-208ENST00000572866 RIMBP3BA6NNM3 1639 aa30.58■■■□□ 2.49
RPH3AL-208ENST00000572866 RIMBP3Q9UFD9 1639 aa30.58■■■□□ 2.49
RPH3AL-208ENST00000572866 CHD1O14646 1710 aa30.57■■■□□ 2.48
RPH3AL-208ENST00000572866 FBLN2P98095 1184 aa30.56■■■□□ 2.48
RPH3AL-208ENST00000572866 ARHGEF11O15085 1522 aa30.56■■■□□ 2.48
RPH3AL-208ENST00000572866 SNAPC4Q5SXM2 1469 aa30.53■■■□□ 2.48
RPH3AL-208ENST00000572866 GRIN2BQ13224 1484 aa30.51■■■□□ 2.48
RPH3AL-208ENST00000572866 MAGI1Q96QZ7 1491 aaPredicted RBP30.5■■■□□ 2.47
RPH3AL-208ENST00000572866 ABCA10Q8WWZ4 1543 aa30.45■■■□□ 2.47
RPH3AL-208ENST00000572866 GAPVD1Q14C86 1478 aa30.43■■■□□ 2.46
RPH3AL-208ENST00000572866 CHMP7Q8WUX9 453 aaPredicted RBP30.42■■■□□ 2.46
RPH3AL-208ENST00000572866 WRNQ14191 1432 aaPredicted RBP eCLIP30.39■■■□□ 2.45
RPH3AL-208ENST00000572866 SYNJ2O15056 1496 aa30.38■■■□□ 2.45
RPH3AL-208ENST00000572866 ABCA5Q8WWZ7 1642 aa30.35■■■□□ 2.45
RPH3AL-208ENST00000572866 TOP2BQ02880 1626 aa30.34■■■□□ 2.45
RPH3AL-208ENST00000572866 SYNJ1O43426 1573 aa30.32■■■□□ 2.45
RPH3AL-208ENST00000572866 PBRM1Q86U86 1689 aa30.32■■■□□ 2.44
RPH3AL-208ENST00000572866 BIVM-ERCC5R4GMW8 1640 aa30.32■■■□□ 2.44
RPH3AL-208ENST00000572866 CLASP1Q7Z460 1538 aa30.32■■■□□ 2.44
RPH3AL-208ENST00000572866 CYB5RLQ6IPT4 315 aa30.3■■■□□ 2.44
RPH3AL-208ENST00000572866 ARAP1Q96P48 1450 aa30.27■■■□□ 2.44
RPH3AL-208ENST00000572866 GRIN2AQ12879 1464 aa30.11■■■□□ 2.41
RPH3AL-208ENST00000572866 ADAMTS12P58397 1594 aa30.1■■■□□ 2.41
RPH3AL-208ENST00000572866 ERICH3Q5RHP9 1530 aa30.08■■■□□ 2.41
RPH3AL-208ENST00000572866 FHAD1B1AJZ9 1412 aa30.07■■■□□ 2.4
RPH3AL-208ENST00000572866 NUP160Q12769 1436 aa30.03■■■□□ 2.4
RPH3AL-208ENST00000572866 CEP170Q5SW79 1584 aa29.95■■■□□ 2.39
RPH3AL-208ENST00000572866 TRHP20396 242 aaPredicted RBP29.87■■■□□ 2.37
RPH3AL-208ENST00000572866 SHROOM2Q13796 1616 aa29.82■■■□□ 2.36
RPH3AL-208ENST00000572866 ERCC6L2Q5T890 1561 aa29.81■■■□□ 2.36
RPH3AL-208ENST00000572866 KIF27Q86VH2 1401 aa29.79■■■□□ 2.36
RPH3AL-208ENST00000572866 IGF1RP08069 1367 aa29.75■■■□□ 2.35
RPH3AL-208ENST00000572866 JPH4Q96JJ6 628 aa29.7■■■□□ 2.35
RPH3AL-208ENST00000572866 PRG4Q92954 1404 aaPredicted RBP29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms