RNA–Protein interactions for RNA: ENST00000572721.1

SRRM2-210, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 2

Gene SRRM2, Length 841 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-210ENST00000572721 NISCHQ9Y2I1 1504 aa34.66■■■■□ 3.14
SRRM2-210ENST00000572721 CCDC180Q9P1Z9 1646 aa30.99■■■□□ 2.55
SRRM2-210ENST00000572721 ABCC9O60706 1549 aa30.81■■■□□ 2.52
SRRM2-210ENST00000572721 RB1CC1Q8TDY2 1594 aa29.4■■■□□ 2.3
SRRM2-210ENST00000572721 DCAF8L2P0C7V8 631 aa29.3■■■□□ 2.28
SRRM2-210ENST00000572721 NACADO15069 1562 aa29.23■■■□□ 2.27
SRRM2-210ENST00000572721 MYO15BQ96JP2 1530 aa28.84■■■□□ 2.21
SRRM2-210ENST00000572721 ZCCHC6Q5VYS8 1495 aaKnown RBP28.78■■■□□ 2.2
SRRM2-210ENST00000572721 UNC13AQ9UPW8 1703 aa28.76■■■□□ 2.19
SRRM2-210ENST00000572721 PABPN1Q86U42 306 aaKnown RBP eCLIP28.74■■■□□ 2.19
SRRM2-210ENST00000572721 DNAJC5BQ9UF47 199 aa28.62■■■□□ 2.17
SRRM2-210ENST00000572721 DCAF1Q9Y4B6 1507 aa28.59■■■□□ 2.17
SRRM2-210ENST00000572721 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
SRRM2-210ENST00000572721 SCRIBQ14160 1630 aa28.33■■■□□ 2.13
SRRM2-210ENST00000572721 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
SRRM2-210ENST00000572721 CC2D2AQ9P2K1 1620 aa27.82■■■□□ 2.04
SRRM2-210ENST00000572721 EIF4G1Q04637 1599 aaKnown RBP27.81■■■□□ 2.04
SRRM2-210ENST00000572721 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.03
SRRM2-210ENST00000572721 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
SRRM2-210ENST00000572721 NCAPD3P42695 1498 aa26.96■■□□□ 1.91
SRRM2-210ENST00000572721 ATAD2BQ9ULI0 1458 aa26.94■■□□□ 1.9
SRRM2-210ENST00000572721 BAZ1AQ9NRL2 1556 aaPredicted RBP26.9■■□□□ 1.9
SRRM2-210ENST00000572721 SMARCA2P51531 1590 aa26.89■■□□□ 1.9
SRRM2-210ENST00000572721 HMGXB3Q12766 1538 aa26.8■■□□□ 1.88
SRRM2-210ENST00000572721 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
SRRM2-210ENST00000572721 MROH2BQ7Z745 1585 aa26.73■■□□□ 1.87
SRRM2-210ENST00000572721 PEG3Q9GZU2 1588 aa26.68■■□□□ 1.86
SRRM2-210ENST00000572721 ERCC6Q03468 1493 aa26.6■■□□□ 1.85
SRRM2-210ENST00000572721 NESP48681 1621 aa26.53■■□□□ 1.84
SRRM2-210ENST00000572721 WIZO95785 1651 aa26.46■■□□□ 1.83
SRRM2-210ENST00000572721 CUX2O14529 1486 aa26.38■■□□□ 1.81
SRRM2-210ENST00000572721 LAMC3Q9Y6N6 1575 aa26.35■■□□□ 1.81
SRRM2-210ENST00000572721 RSF1Q96T23 1441 aaPredicted RBP26.25■■□□□ 1.79
SRRM2-210ENST00000572721 KIF21AQ7Z4S6 1674 aa26.22■■□□□ 1.79
SRRM2-210ENST00000572721 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
SRRM2-210ENST00000572721 CADPSQ9ULU8 1353 aa26.19■■□□□ 1.78
SRRM2-210ENST00000572721 THOC2Q8NI27 1593 aaKnown RBP26.17■■□□□ 1.78
SRRM2-210ENST00000572721 TOP2AP11388 1531 aaKnown RBP26.11■■□□□ 1.77
SRRM2-210ENST00000572721 DNAJC5Q9H3Z4 198 aa26.08■■□□□ 1.77
SRRM2-210ENST00000572721 MRC2Q9UBG0 1479 aa25.96■■□□□ 1.75
SRRM2-210ENST00000572721 CFTRP13569 1480 aa25.92■■□□□ 1.74
SRRM2-210ENST00000572721 CEP164Q9UPV0 1460 aa25.92■■□□□ 1.74
SRRM2-210ENST00000572721 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
SRRM2-210ENST00000572721 WDR62O43379 1518 aa25.87■■□□□ 1.73
SRRM2-210ENST00000572721 CCDC88BA6NC98 1476 aa25.82■■□□□ 1.72
SRRM2-210ENST00000572721 PRDM2Q13029 1718 aa25.74■■□□□ 1.71
SRRM2-210ENST00000572721 URB2Q14146 1524 aaKnown RBP25.67■■□□□ 1.7
SRRM2-210ENST00000572721 TOPBP1Q92547 1522 aa25.44■■□□□ 1.66
SRRM2-210ENST00000572721 SUPT5HO00267 1087 aaKnown RBP25.41■■□□□ 1.66
SRRM2-210ENST00000572721 ABCC8Q09428 1581 aa25.39■■□□□ 1.65
SRRM2-210ENST00000572721 DNMBPQ6XZF7 1577 aa25.37■■□□□ 1.65
SRRM2-210ENST00000572721 IFT140Q96RY7 1462 aa25.37■■□□□ 1.65
SRRM2-210ENST00000572721 ZNF608Q9ULD9 1512 aaPredicted RBP25.32■■□□□ 1.64
SRRM2-210ENST00000572721 OSCARQ8IYS5 282 aa25.26■■□□□ 1.63
SRRM2-210ENST00000572721 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
SRRM2-210ENST00000572721 POLA1P09884 1462 aaPredicted RBP25.2■■□□□ 1.62
SRRM2-210ENST00000572721 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
SRRM2-210ENST00000572721 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
SRRM2-210ENST00000572721 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.629e-18■■■□□ 17
SRRM2-210ENST00000572721 RAD54L2Q9Y4B4 1467 aa25.13■■□□□ 1.61
SRRM2-210ENST00000572721 SOGA1O94964 1423 aa25.11■■□□□ 1.61
SRRM2-210ENST00000572721 CUX1P39880 1505 aa25.1■■□□□ 1.61
SRRM2-210ENST00000572721 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
SRRM2-210ENST00000572721 TDRD9Q8NDG6 1382 aaKnown RBP25.04■■□□□ 1.6
SRRM2-210ENST00000572721 FBLN2P98095 1184 aa25■■□□□ 1.59
SRRM2-210ENST00000572721 CHD1O14646 1710 aa25■■□□□ 1.59
SRRM2-210ENST00000572721 WDR97A6NE52 1622 aa24.92■■□□□ 1.58
SRRM2-210ENST00000572721 RIMBP3CA6NJZ7 1639 aa24.91■■□□□ 1.58
SRRM2-210ENST00000572721 RIMBP3BA6NNM3 1639 aa24.91■■□□□ 1.58
SRRM2-210ENST00000572721 RIMBP3Q9UFD9 1639 aa24.91■■□□□ 1.58
SRRM2-210ENST00000572721 SNAPC4Q5SXM2 1469 aa24.89■■□□□ 1.58
SRRM2-210ENST00000572721 ARHGEF11O15085 1522 aa24.85■■□□□ 1.57
SRRM2-210ENST00000572721 GRIN2BQ13224 1484 aa24.84■■□□□ 1.57
SRRM2-210ENST00000572721 CHMP7Q8WUX9 453 aaPredicted RBP24.81■■□□□ 1.56
SRRM2-210ENST00000572721 MAGI1Q96QZ7 1491 aaPredicted RBP24.81■■□□□ 1.56
SRRM2-210ENST00000572721 PBRM1Q86U86 1689 aa24.81■■□□□ 1.56
SRRM2-210ENST00000572721 GAPVD1Q14C86 1478 aa24.8■■□□□ 1.56
SRRM2-210ENST00000572721 WRNQ14191 1432 aaPredicted RBP eCLIP24.79■■□□□ 1.56
SRRM2-210ENST00000572721 ABCA10Q8WWZ4 1543 aa24.79■■□□□ 1.56
SRRM2-210ENST00000572721 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
SRRM2-210ENST00000572721 TOP2BQ02880 1626 aa24.76■■□□□ 1.55
SRRM2-210ENST00000572721 BIVM-ERCC5R4GMW8 1640 aa24.76■■□□□ 1.55
SRRM2-210ENST00000572721 ABCA5Q8WWZ7 1642 aa24.74■■□□□ 1.55
SRRM2-210ENST00000572721 SYNJ2O15056 1496 aa24.73■■□□□ 1.55
SRRM2-210ENST00000572721 CYB5RLQ6IPT4 315 aa24.7■■□□□ 1.54
SRRM2-210ENST00000572721 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
SRRM2-210ENST00000572721 ARAP1Q96P48 1450 aa24.61■■□□□ 1.53
SRRM2-210ENST00000572721 ADAMTS12P58397 1594 aa24.55■■□□□ 1.52
SRRM2-210ENST00000572721 GRIN2AQ12879 1464 aa24.53■■□□□ 1.52
SRRM2-210ENST00000572721 ERICH3Q5RHP9 1530 aa24.49■■□□□ 1.51
SRRM2-210ENST00000572721 FHAD1B1AJZ9 1412 aa24.48■■□□□ 1.51
SRRM2-210ENST00000572721 CEP170Q5SW79 1584 aa24.44■■□□□ 1.5
SRRM2-210ENST00000572721 NUP160Q12769 1436 aa24.4■■□□□ 1.5
SRRM2-210ENST00000572721 TRHP20396 242 aaPredicted RBP24.39■■□□□ 1.49
SRRM2-210ENST00000572721 ERCC6L2Q5T890 1561 aa24.33■■□□□ 1.49
SRRM2-210ENST00000572721 KIF27Q86VH2 1401 aa24.3■■□□□ 1.48
SRRM2-210ENST00000572721 SHROOM2Q13796 1616 aa24.28■■□□□ 1.48
SRRM2-210ENST00000572721 IGF1RP08069 1367 aa24.24■■□□□ 1.47
SRRM2-210ENST00000572721 CUL7Q14999 1698 aa24.21■■□□□ 1.47
SRRM2-210ENST00000572721 PRG4Q92954 1404 aaPredicted RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms