RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 NISCHQ9Y2I1 1504 aa24.86■■□□□ 1.57
TRAPPC1-205ENST00000572656 ABCC9O60706 1549 aa22.47■■□□□ 1.19
TRAPPC1-205ENST00000572656 CCDC180Q9P1Z9 1646 aa22.29■■□□□ 1.16
TRAPPC1-205ENST00000572656 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
TRAPPC1-205ENST00000572656 DNAJC5BQ9UF47 199 aa21.22■□□□□ 0.99
TRAPPC1-205ENST00000572656 NACADO15069 1562 aa21.16■□□□□ 0.98
TRAPPC1-205ENST00000572656 DCAF8L2P0C7V8 631 aa21.08■□□□□ 0.97
TRAPPC1-205ENST00000572656 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
TRAPPC1-205ENST00000572656 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
TRAPPC1-205ENST00000572656 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
TRAPPC1-205ENST00000572656 BICRAQ9NZM4 1560 aa20.69■□□□□ 0.9
TRAPPC1-205ENST00000572656 ZCCHC6Q5VYS8 1495 aaKnown RBP20.58■□□□□ 0.89
TRAPPC1-205ENST00000572656 DCAF1Q9Y4B6 1507 aa20.54■□□□□ 0.88
TRAPPC1-205ENST00000572656 SHROOM4Q9ULL8 1493 aa20.45■□□□□ 0.86
TRAPPC1-205ENST00000572656 SCRIBQ14160 1630 aa20.32■□□□□ 0.84
TRAPPC1-205ENST00000572656 CECR2Q9BXF3 1484 aa20.27■□□□□ 0.84
TRAPPC1-205ENST00000572656 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
TRAPPC1-205ENST00000572656 EIF4G1Q04637 1599 aaKnown RBP20.2■□□□□ 0.82
TRAPPC1-205ENST00000572656 DNAJC5Q9H3Z4 198 aa19.59■□□□□ 0.73
TRAPPC1-205ENST00000572656 NCAPD3P42695 1498 aa19.58■□□□□ 0.72
TRAPPC1-205ENST00000572656 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
TRAPPC1-205ENST00000572656 CUX2O14529 1486 aa19.42■□□□□ 0.7
TRAPPC1-205ENST00000572656 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
TRAPPC1-205ENST00000572656 SMARCA2P51531 1590 aa19.4■□□□□ 0.7
TRAPPC1-205ENST00000572656 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
TRAPPC1-205ENST00000572656 HMGXB3Q12766 1538 aa19.38■□□□□ 0.69
TRAPPC1-205ENST00000572656 BAZ1AQ9NRL2 1556 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC1-205ENST00000572656 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
TRAPPC1-205ENST00000572656 NESP48681 1621 aa19.26■□□□□ 0.67
TRAPPC1-205ENST00000572656 PEG3Q9GZU2 1588 aa19.22■□□□□ 0.67
TRAPPC1-205ENST00000572656 MROH2BQ7Z745 1585 aa19.15■□□□□ 0.66
TRAPPC1-205ENST00000572656 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
TRAPPC1-205ENST00000572656 THOC2Q8NI27 1593 aaKnown RBP19.06■□□□□ 0.64
TRAPPC1-205ENST00000572656 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
TRAPPC1-205ENST00000572656 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
TRAPPC1-205ENST00000572656 KIF21AQ7Z4S6 1674 aa18.92■□□□□ 0.62
TRAPPC1-205ENST00000572656 WIZO95785 1651 aa18.86■□□□□ 0.61
TRAPPC1-205ENST00000572656 MRC2Q9UBG0 1479 aa18.86■□□□□ 0.61
TRAPPC1-205ENST00000572656 WDR62O43379 1518 aa18.8■□□□□ 0.6
TRAPPC1-205ENST00000572656 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
TRAPPC1-205ENST00000572656 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC1-205ENST00000572656 CFTRP13569 1480 aa18.73■□□□□ 0.59
TRAPPC1-205ENST00000572656 FANCD2Q9BXW9 1451 aa18.73■□□□□ 0.59
TRAPPC1-205ENST00000572656 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
TRAPPC1-205ENST00000572656 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
TRAPPC1-205ENST00000572656 URB2Q14146 1524 aaKnown RBP18.58■□□□□ 0.56
TRAPPC1-205ENST00000572656 OSCARQ8IYS5 282 aa18.57■□□□□ 0.56
TRAPPC1-205ENST00000572656 CCDC88BA6NC98 1476 aa18.48■□□□□ 0.55
TRAPPC1-205ENST00000572656 IFT140Q96RY7 1462 aa18.41■□□□□ 0.54
TRAPPC1-205ENST00000572656 ZNF608Q9ULD9 1512 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC1-205ENST00000572656 PRDM2Q13029 1718 aa18.36■□□□□ 0.53
TRAPPC1-205ENST00000572656 TOPBP1Q92547 1522 aa18.36■□□□□ 0.53
TRAPPC1-205ENST00000572656 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
TRAPPC1-205ENST00000572656 DNMBPQ6XZF7 1577 aa18.26■□□□□ 0.51
TRAPPC1-205ENST00000572656 RIMBP3CA6NJZ7 1639 aa18.23■□□□□ 0.51
TRAPPC1-205ENST00000572656 RIMBP3BA6NNM3 1639 aa18.23■□□□□ 0.51
TRAPPC1-205ENST00000572656 RIMBP3Q9UFD9 1639 aa18.23■□□□□ 0.51
TRAPPC1-205ENST00000572656 EIF4G3O43432 1585 aaKnown RBP18.21■□□□□ 0.51
TRAPPC1-205ENST00000572656 AQRO60306 1485 aaKnown RBP eCLIP18.2■□□□□ 0.5
TRAPPC1-205ENST00000572656 ARHGEF11O15085 1522 aa18.2■□□□□ 0.5
TRAPPC1-205ENST00000572656 TARBP1Q13395 1621 aaKnown RBP18.17■□□□□ 0.5
TRAPPC1-205ENST00000572656 POLA1P09884 1462 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC1-205ENST00000572656 FBLN2P98095 1184 aa18.13■□□□□ 0.49
TRAPPC1-205ENST00000572656 CYB5RLQ6IPT4 315 aa18.13■□□□□ 0.49
TRAPPC1-205ENST00000572656 SOGA1O94964 1423 aa18.11■□□□□ 0.49
TRAPPC1-205ENST00000572656 RAD54L2Q9Y4B4 1467 aa18.11■□□□□ 0.49
TRAPPC1-205ENST00000572656 TDRD9Q8NDG6 1382 aaKnown RBP18.09■□□□□ 0.49
TRAPPC1-205ENST00000572656 CHD1O14646 1710 aa18.05■□□□□ 0.48
TRAPPC1-205ENST00000572656 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
TRAPPC1-205ENST00000572656 ARAP1Q96P48 1450 aa18.02■□□□□ 0.48
TRAPPC1-205ENST00000572656 SNAPC4Q5SXM2 1469 aa18■□□□□ 0.47
TRAPPC1-205ENST00000572656 CUX1P39880 1505 aa17.99■□□□□ 0.47
TRAPPC1-205ENST00000572656 WDR97A6NE52 1622 aa17.99■□□□□ 0.47
TRAPPC1-205ENST00000572656 CHMP7Q8WUX9 453 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC1-205ENST00000572656 TRHP20396 242 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC1-205ENST00000572656 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
TRAPPC1-205ENST00000572656 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC1-205ENST00000572656 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
TRAPPC1-205ENST00000572656 SYNJ2O15056 1496 aa17.9■□□□□ 0.46
TRAPPC1-205ENST00000572656 SYNJ1O43426 1573 aa17.9■□□□□ 0.46
TRAPPC1-205ENST00000572656 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
TRAPPC1-205ENST00000572656 ABCA10Q8WWZ4 1543 aa17.84■□□□□ 0.45
TRAPPC1-205ENST00000572656 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
TRAPPC1-205ENST00000572656 ABCA5Q8WWZ7 1642 aa17.77■□□□□ 0.44
TRAPPC1-205ENST00000572656 PBRM1Q86U86 1689 aa17.77■□□□□ 0.43
TRAPPC1-205ENST00000572656 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
TRAPPC1-205ENST00000572656 GRIN2AQ12879 1464 aa17.71■□□□□ 0.43
TRAPPC1-205ENST00000572656 NUP160Q12769 1436 aa17.67■□□□□ 0.42
TRAPPC1-205ENST00000572656 TOP2BQ02880 1626 aa17.65■□□□□ 0.42
TRAPPC1-205ENST00000572656 FHAD1B1AJZ9 1412 aa17.65■□□□□ 0.42
TRAPPC1-205ENST00000572656 ADAMTS12P58397 1594 aa17.65■□□□□ 0.42
TRAPPC1-205ENST00000572656 BIVM-ERCC5R4GMW8 1640 aa17.63■□□□□ 0.41
TRAPPC1-205ENST00000572656 CEP170Q5SW79 1584 aa17.62■□□□□ 0.41
TRAPPC1-205ENST00000572656 ERCC6L2Q5T890 1561 aa17.62■□□□□ 0.41
TRAPPC1-205ENST00000572656 ERICH3Q5RHP9 1530 aa17.6■□□□□ 0.41
TRAPPC1-205ENST00000572656 SHROOM2Q13796 1616 aa17.55■□□□□ 0.4
TRAPPC1-205ENST00000572656 AEBP2Q6ZN18 517 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC1-205ENST00000572656 JPH4Q96JJ6 628 aa17.52■□□□□ 0.4
TRAPPC1-205ENST00000572656 PRG4Q92954 1404 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC1-205ENST00000572656 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms