RNA–Protein interactions for RNA: ENST00000572476.1

SLC12A4-210, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-210ENST00000572476 NISCHQ9Y2I1 1504 aa36.9■■■■□ 3.5
SLC12A4-210ENST00000572476 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
SLC12A4-210ENST00000572476 ABCC9O60706 1549 aa32.45■■■□□ 2.78
SLC12A4-210ENST00000572476 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
SLC12A4-210ENST00000572476 NACADO15069 1562 aa31.04■■■□□ 2.56
SLC12A4-210ENST00000572476 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
SLC12A4-210ENST00000572476 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
SLC12A4-210ENST00000572476 ZCCHC6Q5VYS8 1495 aaKnown RBP30.68■■■□□ 2.5
SLC12A4-210ENST00000572476 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.48
SLC12A4-210ENST00000572476 UNC13AQ9UPW8 1703 aa30.42■■■□□ 2.46
SLC12A4-210ENST00000572476 PABPN1Q86U42 306 aaKnown RBP eCLIP30.28■■■□□ 2.44
SLC12A4-210ENST00000572476 BICRAQ9NZM4 1560 aa30.26■■■□□ 2.43
SLC12A4-210ENST00000572476 DNAJC5BQ9UF47 199 aa30.18■■■□□ 2.42
SLC12A4-210ENST00000572476 SCRIBQ14160 1630 aa29.94■■■□□ 2.38
SLC12A4-210ENST00000572476 SHROOM4Q9ULL8 1493 aa29.89■■■□□ 2.38
SLC12A4-210ENST00000572476 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
SLC12A4-210ENST00000572476 CC2D2AQ9P2K1 1620 aa29.38■■■□□ 2.29
SLC12A4-210ENST00000572476 CECR2Q9BXF3 1484 aa29.21■■■□□ 2.27
SLC12A4-210ENST00000572476 NCAPD3P42695 1498 aa28.69■■■□□ 2.18
SLC12A4-210ENST00000572476 SMARCA4P51532 1647 aa28.67■■■□□ 2.18
SLC12A4-210ENST00000572476 ATAD2BQ9ULI0 1458 aa28.63■■■□□ 2.17
SLC12A4-210ENST00000572476 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
SLC12A4-210ENST00000572476 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
SLC12A4-210ENST00000572476 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
SLC12A4-210ENST00000572476 PEG3Q9GZU2 1588 aa28.46■■■□□ 2.15
SLC12A4-210ENST00000572476 MROH2BQ7Z745 1585 aa28.43■■■□□ 2.14
SLC12A4-210ENST00000572476 BAZ1BQ9UIG0 1483 aaKnown RBP28.3■■■□□ 2.12
SLC12A4-210ENST00000572476 WIZO95785 1651 aa28.07■■■□□ 2.08
SLC12A4-210ENST00000572476 NESP48681 1621 aa28.03■■■□□ 2.08
SLC12A4-210ENST00000572476 RSF1Q96T23 1441 aaPredicted RBP28.01■■■□□ 2.08
SLC12A4-210ENST00000572476 ERCC6Q03468 1493 aa27.94■■■□□ 2.06
SLC12A4-210ENST00000572476 LAMC3Q9Y6N6 1575 aa27.91■■■□□ 2.06
SLC12A4-210ENST00000572476 CUX2O14529 1486 aa27.85■■■□□ 2.05
SLC12A4-210ENST00000572476 CADPSQ9ULU8 1353 aa27.8■■■□□ 2.04
SLC12A4-210ENST00000572476 TOP2AP11388 1531 aaKnown RBP27.77■■■□□ 2.04
SLC12A4-210ENST00000572476 PDS5BQ9NTI5 1447 aa27.72■■■□□ 2.03
SLC12A4-210ENST00000572476 THOC2Q8NI27 1593 aaKnown RBP27.69■■■□□ 2.02
SLC12A4-210ENST00000572476 KIF21AQ7Z4S6 1674 aa27.65■■■□□ 2.02
SLC12A4-210ENST00000572476 CFTRP13569 1480 aa27.59■■■□□ 2.01
SLC12A4-210ENST00000572476 CCDC88BA6NC98 1476 aa27.47■■□□□ 1.99
SLC12A4-210ENST00000572476 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
SLC12A4-210ENST00000572476 FANCD2Q9BXW9 1451 aa27.44■■□□□ 1.98
SLC12A4-210ENST00000572476 WDR62O43379 1518 aa27.41■■□□□ 1.98
SLC12A4-210ENST00000572476 CEP164Q9UPV0 1460 aa27.41■■□□□ 1.98
SLC12A4-210ENST00000572476 DNAJC5Q9H3Z4 198 aa27.39■■□□□ 1.98
SLC12A4-210ENST00000572476 PRDM2Q13029 1718 aa27.28■■□□□ 1.96
SLC12A4-210ENST00000572476 URB2Q14146 1524 aaKnown RBP27.22■■□□□ 1.95
SLC12A4-210ENST00000572476 TOPBP1Q92547 1522 aa26.99■■□□□ 1.91
SLC12A4-210ENST00000572476 ABCC8Q09428 1581 aa26.96■■□□□ 1.91
SLC12A4-210ENST00000572476 SUPT5HO00267 1087 aaKnown RBP26.94■■□□□ 1.9
SLC12A4-210ENST00000572476 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
SLC12A4-210ENST00000572476 IFT140Q96RY7 1462 aa26.88■■□□□ 1.89
SLC12A4-210ENST00000572476 ZNF608Q9ULD9 1512 aaPredicted RBP26.8■■□□□ 1.88
SLC12A4-210ENST00000572476 TARBP1Q13395 1621 aaKnown RBP26.74■■□□□ 1.87
SLC12A4-210ENST00000572476 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
SLC12A4-210ENST00000572476 CUX1P39880 1505 aa26.69■■□□□ 1.86
SLC12A4-210ENST00000572476 EIF4G3O43432 1585 aaKnown RBP26.63■■□□□ 1.85
SLC12A4-210ENST00000572476 OSCARQ8IYS5 282 aa26.63■■□□□ 1.85
SLC12A4-210ENST00000572476 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
SLC12A4-210ENST00000572476 SOGA1O94964 1423 aa26.61■■□□□ 1.85
SLC12A4-210ENST00000572476 FGD5Q6ZNL6 1462 aa26.61■■□□□ 1.85
SLC12A4-210ENST00000572476 AQRO60306 1485 aaKnown RBP eCLIP26.6■■□□□ 1.856e-11■■■■■ 39.2
SLC12A4-210ENST00000572476 WDR97A6NE52 1622 aa26.5■■□□□ 1.83
SLC12A4-210ENST00000572476 TDRD9Q8NDG6 1382 aaKnown RBP26.48■■□□□ 1.83
SLC12A4-210ENST00000572476 ABCA10Q8WWZ4 1543 aa26.38■■□□□ 1.81
SLC12A4-210ENST00000572476 TOP2BQ02880 1626 aa26.36■■□□□ 1.81
SLC12A4-210ENST00000572476 BIVM-ERCC5R4GMW8 1640 aa26.36■■□□□ 1.81
SLC12A4-210ENST00000572476 WRNQ14191 1432 aaPredicted RBP eCLIP26.36■■□□□ 1.81
SLC12A4-210ENST00000572476 CHD1O14646 1710 aa26.34■■□□□ 1.81
SLC12A4-210ENST00000572476 SYNJ1O43426 1573 aa26.33■■□□□ 1.81
SLC12A4-210ENST00000572476 GRIN2BQ13224 1484 aa26.33■■□□□ 1.81
SLC12A4-210ENST00000572476 SNAPC4Q5SXM2 1469 aa26.32■■□□□ 1.8
SLC12A4-210ENST00000572476 MAGI1Q96QZ7 1491 aaPredicted RBP26.3■■□□□ 1.8
SLC12A4-210ENST00000572476 GAPVD1Q14C86 1478 aa26.3■■□□□ 1.8
SLC12A4-210ENST00000572476 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
SLC12A4-210ENST00000572476 FBLN2P98095 1184 aa26.23■■□□□ 1.79
SLC12A4-210ENST00000572476 RIMBP3CA6NJZ7 1639 aa26.22■■□□□ 1.79
SLC12A4-210ENST00000572476 RIMBP3BA6NNM3 1639 aa26.22■■□□□ 1.79
SLC12A4-210ENST00000572476 RIMBP3Q9UFD9 1639 aa26.22■■□□□ 1.79
SLC12A4-210ENST00000572476 PBRM1Q86U86 1689 aa26.22■■□□□ 1.79
SLC12A4-210ENST00000572476 SYNJ2O15056 1496 aa26.2■■□□□ 1.78
SLC12A4-210ENST00000572476 TRIM41Q8WV44 630 aa26.2■■□□□ 1.78
SLC12A4-210ENST00000572476 ARHGEF11O15085 1522 aa26.19■■□□□ 1.78
SLC12A4-210ENST00000572476 CHMP7Q8WUX9 453 aaPredicted RBP26.17■■□□□ 1.78
SLC12A4-210ENST00000572476 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.77
SLC12A4-210ENST00000572476 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
SLC12A4-210ENST00000572476 ADAMTS12P58397 1594 aa26.03■■□□□ 1.76
SLC12A4-210ENST00000572476 GRIN2AQ12879 1464 aa25.99■■□□□ 1.75
SLC12A4-210ENST00000572476 FHAD1B1AJZ9 1412 aa25.99■■□□□ 1.75
SLC12A4-210ENST00000572476 ARAP1Q96P48 1450 aa25.98■■□□□ 1.75
SLC12A4-210ENST00000572476 NUP160Q12769 1436 aa25.95■■□□□ 1.74
SLC12A4-210ENST00000572476 CYB5RLQ6IPT4 315 aa25.94■■□□□ 1.74
SLC12A4-210ENST00000572476 CEP170Q5SW79 1584 aa25.89■■□□□ 1.73
SLC12A4-210ENST00000572476 IGF1RP08069 1367 aa25.84■■□□□ 1.73
SLC12A4-210ENST00000572476 KIF27Q86VH2 1401 aa25.83■■□□□ 1.73
SLC12A4-210ENST00000572476 SHROOM2Q13796 1616 aa25.77■■□□□ 1.72
SLC12A4-210ENST00000572476 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
SLC12A4-210ENST00000572476 CUL7Q14999 1698 aa25.7■■□□□ 1.7
SLC12A4-210ENST00000572476 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
SLC12A4-210ENST00000572476 JPH4Q96JJ6 628 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms