RNA–Protein interactions for RNA: ENST00000572337.5

RFWD3-204, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 4

Gene RFWD3, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-204ENST00000572337 NISCHQ9Y2I1 1504 aa35.7■■■■□ 3.31
RFWD3-204ENST00000572337 CCDC180Q9P1Z9 1646 aa31.84■■■□□ 2.69
RFWD3-204ENST00000572337 ABCC9O60706 1549 aa31.16■■■□□ 2.58
RFWD3-204ENST00000572337 RB1CC1Q8TDY2 1594 aa29.94■■■□□ 2.38
RFWD3-204ENST00000572337 NACADO15069 1562 aa29.86■■■□□ 2.37
RFWD3-204ENST00000572337 DCAF8L2P0C7V8 631 aa29.84■■■□□ 2.37
RFWD3-204ENST00000572337 ZCCHC6Q5VYS8 1495 aaKnown RBP29.74■■■□□ 2.35
RFWD3-204ENST00000572337 MYO15BQ96JP2 1530 aa29.61■■■□□ 2.33
RFWD3-204ENST00000572337 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
RFWD3-204ENST00000572337 UNC13AQ9UPW8 1703 aa29.44■■■□□ 2.3
RFWD3-204ENST00000572337 SCRIBQ14160 1630 aa29.07■■■□□ 2.24
RFWD3-204ENST00000572337 BICRAQ9NZM4 1560 aa29.06■■■□□ 2.24
RFWD3-204ENST00000572337 PABPN1Q86U42 306 aaKnown RBP eCLIP29.06■■■□□ 2.24
RFWD3-204ENST00000572337 SHROOM4Q9ULL8 1493 aa28.64■■■□□ 2.17
RFWD3-204ENST00000572337 DNAJC5BQ9UF47 199 aa28.58■■■□□ 2.17
RFWD3-204ENST00000572337 EIF4G1Q04637 1599 aaKnown RBP28.28■■■□□ 2.12
RFWD3-204ENST00000572337 CC2D2AQ9P2K1 1620 aa28.21■■■□□ 2.11
RFWD3-204ENST00000572337 CECR2Q9BXF3 1484 aa27.95■■■□□ 2.07
RFWD3-204ENST00000572337 SMARCA4P51532 1647 aa27.78■■■□□ 2.04
RFWD3-204ENST00000572337 BAZ1AQ9NRL2 1556 aaPredicted RBP27.68■■■□□ 2.02
RFWD3-204ENST00000572337 ATAD2BQ9ULI0 1458 aa27.56■■■□□ 2
RFWD3-204ENST00000572337 MROH2BQ7Z745 1585 aa27.55■■■□□ 2
RFWD3-204ENST00000572337 SMARCA2P51531 1590 aa27.54■■■□□ 2
RFWD3-204ENST00000572337 NCAPD3P42695 1498 aa27.51■■□□□ 1.99
RFWD3-204ENST00000572337 PEG3Q9GZU2 1588 aa27.45■■□□□ 1.99
RFWD3-204ENST00000572337 HMGXB3Q12766 1538 aa27.43■■□□□ 1.98
RFWD3-204ENST00000572337 BAZ1BQ9UIG0 1483 aaKnown RBP27.36■■□□□ 1.97
RFWD3-204ENST00000572337 WIZO95785 1651 aa27.32■■□□□ 1.96
RFWD3-204ENST00000572337 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
RFWD3-204ENST00000572337 NESP48681 1621 aa26.96■■□□□ 1.91
RFWD3-204ENST00000572337 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.91
RFWD3-204ENST00000572337 LAMC3Q9Y6N6 1575 aa26.86■■□□□ 1.89
RFWD3-204ENST00000572337 ERCC6Q03468 1493 aa26.83■■□□□ 1.89
RFWD3-204ENST00000572337 KIF21AQ7Z4S6 1674 aa26.75■■□□□ 1.87
RFWD3-204ENST00000572337 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
RFWD3-204ENST00000572337 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
RFWD3-204ENST00000572337 PDS5BQ9NTI5 1447 aa26.61■■□□□ 1.85
RFWD3-204ENST00000572337 THOC2Q8NI27 1593 aaKnown RBP26.59■■□□□ 1.85
RFWD3-204ENST00000572337 PRDM2Q13029 1718 aa26.56■■□□□ 1.84
RFWD3-204ENST00000572337 CFTRP13569 1480 aa26.56■■□□□ 1.84
RFWD3-204ENST00000572337 CUX2O14529 1486 aa26.52■■□□□ 1.84
RFWD3-204ENST00000572337 SUPT5HO00267 1087 aaKnown RBP26.47■■□□□ 1.83
RFWD3-204ENST00000572337 FANCD2Q9BXW9 1451 aa26.45■■□□□ 1.82
RFWD3-204ENST00000572337 CEP164Q9UPV0 1460 aa26.43■■□□□ 1.82
RFWD3-204ENST00000572337 MRC2Q9UBG0 1479 aa26.4■■□□□ 1.82
RFWD3-204ENST00000572337 WDR62O43379 1518 aa26.33■■□□□ 1.81
RFWD3-204ENST00000572337 URB2Q14146 1524 aaKnown RBP26.22■■□□□ 1.79
RFWD3-204ENST00000572337 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
RFWD3-204ENST00000572337 DNMBPQ6XZF7 1577 aa26.03■■□□□ 1.76
RFWD3-204ENST00000572337 ABCC8Q09428 1581 aa25.97■■□□□ 1.75
RFWD3-204ENST00000572337 CUX1P39880 1505 aa25.85■■□□□ 1.73
RFWD3-204ENST00000572337 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
RFWD3-204ENST00000572337 POLA1P09884 1462 aaPredicted RBP25.81■■□□□ 1.72
RFWD3-204ENST00000572337 TARBP1Q13395 1621 aaKnown RBP25.8■■□□□ 1.72
RFWD3-204ENST00000572337 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
RFWD3-204ENST00000572337 FGD5Q6ZNL6 1462 aa25.77■■□□□ 1.72
RFWD3-204ENST00000572337 EIF4G3O43432 1585 aaKnown RBP25.73■■□□□ 1.71
RFWD3-204ENST00000572337 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
RFWD3-204ENST00000572337 DNAJC5Q9H3Z4 198 aa25.71■■□□□ 1.71
RFWD3-204ENST00000572337 SOGA1O94964 1423 aa25.67■■□□□ 1.7
RFWD3-204ENST00000572337 BIVM-ERCC5R4GMW8 1640 aa25.66■■□□□ 1.7
RFWD3-204ENST00000572337 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
RFWD3-204ENST00000572337 WDR97A6NE52 1622 aa25.64■■□□□ 1.7
RFWD3-204ENST00000572337 TOP2BQ02880 1626 aa25.63■■□□□ 1.69
RFWD3-204ENST00000572337 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
RFWD3-204ENST00000572337 AQRO60306 1485 aaKnown RBP eCLIP25.61■■□□□ 1.694e-8■■■■■ 31.9
RFWD3-204ENST00000572337 TDRD9Q8NDG6 1382 aaKnown RBP25.55■■□□□ 1.68
RFWD3-204ENST00000572337 CHD1O14646 1710 aa25.49■■□□□ 1.67
RFWD3-204ENST00000572337 PBRM1Q86U86 1689 aa25.49■■□□□ 1.67
RFWD3-204ENST00000572337 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
RFWD3-204ENST00000572337 ABCA5Q8WWZ7 1642 aa25.45■■□□□ 1.67
RFWD3-204ENST00000572337 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
RFWD3-204ENST00000572337 SNAPC4Q5SXM2 1469 aa25.4■■□□□ 1.66
RFWD3-204ENST00000572337 GRIN2BQ13224 1484 aa25.38■■□□□ 1.65
RFWD3-204ENST00000572337 OSCARQ8IYS5 282 aa25.37■■□□□ 1.65
RFWD3-204ENST00000572337 MAGI1Q96QZ7 1491 aaPredicted RBP25.32■■□□□ 1.64
RFWD3-204ENST00000572337 FBLN2P98095 1184 aa25.3■■□□□ 1.64
RFWD3-204ENST00000572337 SYNJ2O15056 1496 aa25.23■■□□□ 1.63
RFWD3-204ENST00000572337 ADAMTS12P58397 1594 aa25.2■■□□□ 1.62
RFWD3-204ENST00000572337 CHMP7Q8WUX9 453 aaPredicted RBP25.19■■□□□ 1.62
RFWD3-204ENST00000572337 ERICH3Q5RHP9 1530 aa25.17■■□□□ 1.62
RFWD3-204ENST00000572337 RIMBP3CA6NJZ7 1639 aa25.12■■□□□ 1.61
RFWD3-204ENST00000572337 RIMBP3BA6NNM3 1639 aa25.12■■□□□ 1.61
RFWD3-204ENST00000572337 RIMBP3Q9UFD9 1639 aa25.12■■□□□ 1.61
RFWD3-204ENST00000572337 CLASP1Q7Z460 1538 aa25.1■■□□□ 1.61
RFWD3-204ENST00000572337 GRIN2AQ12879 1464 aa25.08■■□□□ 1.6
RFWD3-204ENST00000572337 FHAD1B1AJZ9 1412 aa25.07■■□□□ 1.6
RFWD3-204ENST00000572337 KIF27Q86VH2 1401 aa25.07■■□□□ 1.6
RFWD3-204ENST00000572337 ARHGEF11O15085 1522 aa25.06■■□□□ 1.6
RFWD3-204ENST00000572337 CEP170Q5SW79 1584 aa25.01■■□□□ 1.59
RFWD3-204ENST00000572337 CUL7Q14999 1698 aa25■■□□□ 1.59
RFWD3-204ENST00000572337 TRIM41Q8WV44 630 aa24.96■■□□□ 1.59
RFWD3-204ENST00000572337 IGF1RP08069 1367 aa24.95■■□□□ 1.59
RFWD3-204ENST00000572337 NUP160Q12769 1436 aa24.95■■□□□ 1.58
RFWD3-204ENST00000572337 RUSC2Q8N2Y8 1516 aa24.91■■□□□ 1.58
RFWD3-204ENST00000572337 ARAP1Q96P48 1450 aa24.85■■□□□ 1.57
RFWD3-204ENST00000572337 SHROOM2Q13796 1616 aa24.83■■□□□ 1.57
RFWD3-204ENST00000572337 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
RFWD3-204ENST00000572337 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
RFWD3-204ENST00000572337 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms