RNA–Protein interactions for RNA: ENST00000572152.5

ABR-216, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 637 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-216ENST00000572152 NISCHQ9Y2I1 1504 aa24.63■■□□□ 1.53
ABR-216ENST00000572152 CCDC180Q9P1Z9 1646 aa21.95■■□□□ 1.1
ABR-216ENST00000572152 ABCC9O60706 1549 aa21.76■■□□□ 1.07
ABR-216ENST00000572152 RB1CC1Q8TDY2 1594 aa20.8■□□□□ 0.92
ABR-216ENST00000572152 NACADO15069 1562 aa20.72■□□□□ 0.91
ABR-216ENST00000572152 DCAF8L2P0C7V8 631 aa20.72■□□□□ 0.91
ABR-216ENST00000572152 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
ABR-216ENST00000572152 ZCCHC6Q5VYS8 1495 aaKnown RBP20.47■□□□□ 0.87
ABR-216ENST00000572152 DCAF1Q9Y4B6 1507 aa20.36■□□□□ 0.85
ABR-216ENST00000572152 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
ABR-216ENST00000572152 UNC13AQ9UPW8 1703 aa20.27■□□□□ 0.84
ABR-216ENST00000572152 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
ABR-216ENST00000572152 BICRAQ9NZM4 1560 aa20.18■□□□□ 0.82
ABR-216ENST00000572152 SCRIBQ14160 1630 aa20.05■□□□□ 0.8
ABR-216ENST00000572152 SHROOM4Q9ULL8 1493 aa19.94■□□□□ 0.78
ABR-216ENST00000572152 EIF4G1Q04637 1599 aaKnown RBP19.67■□□□□ 0.74
ABR-216ENST00000572152 CC2D2AQ9P2K1 1620 aa19.65■□□□□ 0.74
ABR-216ENST00000572152 CECR2Q9BXF3 1484 aa19.57■□□□□ 0.72
ABR-216ENST00000572152 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
ABR-216ENST00000572152 SMARCA4P51532 1647 aa19.14■□□□□ 0.66
ABR-216ENST00000572152 ATAD2BQ9ULI0 1458 aa19.13■□□□□ 0.65
ABR-216ENST00000572152 DNAJC5Q9H3Z4 198 aa19.1■□□□□ 0.65
ABR-216ENST00000572152 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
ABR-216ENST00000572152 SMARCA2P51531 1590 aa19.07■□□□□ 0.64
ABR-216ENST00000572152 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
ABR-216ENST00000572152 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
ABR-216ENST00000572152 PEG3Q9GZU2 1588 aa18.96■□□□□ 0.63
ABR-216ENST00000572152 BAZ1BQ9UIG0 1483 aaKnown RBP18.95■□□□□ 0.62
ABR-216ENST00000572152 ERCC6Q03468 1493 aa18.77■□□□□ 0.59
ABR-216ENST00000572152 NESP48681 1621 aa18.76■□□□□ 0.59
ABR-216ENST00000572152 WIZO95785 1651 aa18.74■□□□□ 0.59
ABR-216ENST00000572152 RSF1Q96T23 1441 aaPredicted RBP18.7■□□□□ 0.58
ABR-216ENST00000572152 LAMC3Q9Y6N6 1575 aa18.65■□□□□ 0.58
ABR-216ENST00000572152 CUX2O14529 1486 aa18.64■□□□□ 0.57
ABR-216ENST00000572152 CADPSQ9ULU8 1353 aa18.58■□□□□ 0.57
ABR-216ENST00000572152 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
ABR-216ENST00000572152 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
ABR-216ENST00000572152 THOC2Q8NI27 1593 aaKnown RBP18.49■□□□□ 0.55
ABR-216ENST00000572152 KIF21AQ7Z4S6 1674 aa18.48■□□□□ 0.55
ABR-216ENST00000572152 CFTRP13569 1480 aa18.42■□□□□ 0.54
ABR-216ENST00000572152 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.53
ABR-216ENST00000572152 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
ABR-216ENST00000572152 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
ABR-216ENST00000572152 CEP164Q9UPV0 1460 aa18.35■□□□□ 0.53
ABR-216ENST00000572152 WDR62O43379 1518 aa18.32■□□□□ 0.52
ABR-216ENST00000572152 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
ABR-216ENST00000572152 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
ABR-216ENST00000572152 SUPT5HO00267 1087 aaKnown RBP18.08■□□□□ 0.48
ABR-216ENST00000572152 TOPBP1Q92547 1522 aa18.04■□□□□ 0.48
ABR-216ENST00000572152 ABCC8Q09428 1581 aa18.02■□□□□ 0.48
ABR-216ENST00000572152 IFT140Q96RY7 1462 aa17.99■□□□□ 0.47
ABR-216ENST00000572152 DNMBPQ6XZF7 1577 aa17.99■□□□□ 0.47
ABR-216ENST00000572152 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
ABR-216ENST00000572152 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
ABR-216ENST00000572152 OSCARQ8IYS5 282 aa17.86■□□□□ 0.45
ABR-216ENST00000572152 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
ABR-216ENST00000572152 TARBP1Q13395 1621 aaKnown RBP17.84■□□□□ 0.45
ABR-216ENST00000572152 EIF4G3O43432 1585 aaKnown RBP17.82■□□□□ 0.44
ABR-216ENST00000572152 CUX1P39880 1505 aa17.82■□□□□ 0.44
ABR-216ENST00000572152 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
ABR-216ENST00000572152 SOGA1O94964 1423 aa17.81■□□□□ 0.44
ABR-216ENST00000572152 AQRO60306 1485 aaKnown RBP eCLIP17.81■□□□□ 0.44
ABR-216ENST00000572152 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
ABR-216ENST00000572152 TDRD9Q8NDG6 1382 aaKnown RBP17.75■□□□□ 0.43
ABR-216ENST00000572152 WDR97A6NE52 1622 aa17.67■□□□□ 0.42
ABR-216ENST00000572152 FBLN2P98095 1184 aa17.65■□□□□ 0.42
ABR-216ENST00000572152 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.41
ABR-216ENST00000572152 GRIN2BQ13224 1484 aa17.62■□□□□ 0.41
ABR-216ENST00000572152 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
ABR-216ENST00000572152 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
ABR-216ENST00000572152 CHD1O14646 1710 aa17.61■□□□□ 0.41
ABR-216ENST00000572152 GAPVD1Q14C86 1478 aa17.59■□□□□ 0.41
ABR-216ENST00000572152 MAGI1Q96QZ7 1491 aaPredicted RBP17.59■□□□□ 0.41
ABR-216ENST00000572152 TOP2BQ02880 1626 aa17.58■□□□□ 0.41
ABR-216ENST00000572152 SYNJ1O43426 1573 aa17.58■□□□□ 0.41
ABR-216ENST00000572152 BIVM-ERCC5R4GMW8 1640 aa17.58■□□□□ 0.4
ABR-216ENST00000572152 CHMP7Q8WUX9 453 aaPredicted RBP17.56■□□□□ 0.4
ABR-216ENST00000572152 RIMBP3CA6NJZ7 1639 aa17.55■□□□□ 0.4
ABR-216ENST00000572152 RIMBP3BA6NNM3 1639 aa17.55■□□□□ 0.4
ABR-216ENST00000572152 RIMBP3Q9UFD9 1639 aa17.55■□□□□ 0.4
ABR-216ENST00000572152 ARHGEF11O15085 1522 aa17.55■□□□□ 0.4
ABR-216ENST00000572152 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
ABR-216ENST00000572152 SYNJ2O15056 1496 aa17.52■□□□□ 0.4
ABR-216ENST00000572152 PBRM1Q86U86 1689 aa17.52■□□□□ 0.39
ABR-216ENST00000572152 CLASP1Q7Z460 1538 aa17.46■□□□□ 0.39
ABR-216ENST00000572152 CYB5RLQ6IPT4 315 aa17.42■□□□□ 0.38
ABR-216ENST00000572152 ADAMTS12P58397 1594 aa17.4■□□□□ 0.38
ABR-216ENST00000572152 GRIN2AQ12879 1464 aa17.39■□□□□ 0.37
ABR-216ENST00000572152 ARAP1Q96P48 1450 aa17.39■□□□□ 0.37
ABR-216ENST00000572152 ERICH3Q5RHP9 1530 aa17.39■□□□□ 0.37
ABR-216ENST00000572152 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
ABR-216ENST00000572152 NUP160Q12769 1436 aa17.32■□□□□ 0.36
ABR-216ENST00000572152 CEP170Q5SW79 1584 aa17.3■□□□□ 0.36
ABR-216ENST00000572152 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
ABR-216ENST00000572152 IGF1RP08069 1367 aa17.26■□□□□ 0.35
ABR-216ENST00000572152 ERCC6L2Q5T890 1561 aa17.2■□□□□ 0.34
ABR-216ENST00000572152 SHROOM2Q13796 1616 aa17.19■□□□□ 0.34
ABR-216ENST00000572152 JPH4Q96JJ6 628 aa17.17■□□□□ 0.34
ABR-216ENST00000572152 CUL7Q14999 1698 aa17.16■□□□□ 0.34
ABR-216ENST00000572152 PRG4Q92954 1404 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 1312.1 ms