RNA–Protein interactions for RNA: ENST00000572121.1

ITGAE-206, Transcript of integrin subunit alpha E, humanhuman

TSL 5

Gene ITGAE, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-206ENST00000572121 NISCHQ9Y2I1 1504 aa35.61■■■■□ 3.29
ITGAE-206ENST00000572121 CCDC180Q9P1Z9 1646 aa31.92■■■□□ 2.7
ITGAE-206ENST00000572121 ABCC9O60706 1549 aa31.89■■■□□ 2.7
ITGAE-206ENST00000572121 RB1CC1Q8TDY2 1594 aa30.41■■■□□ 2.46
ITGAE-206ENST00000572121 NACADO15069 1562 aa30.2■■■□□ 2.43
ITGAE-206ENST00000572121 DCAF8L2P0C7V8 631 aa30.17■■■□□ 2.42
ITGAE-206ENST00000572121 DNAJC5BQ9UF47 199 aa30.02■■■□□ 2.4
ITGAE-206ENST00000572121 MYO15BQ96JP2 1530 aa29.8■■■□□ 2.36
ITGAE-206ENST00000572121 PABPN1Q86U42 306 aaKnown RBP eCLIP29.71■■■□□ 2.35
ITGAE-206ENST00000572121 UNC13AQ9UPW8 1703 aa29.54■■■□□ 2.32
ITGAE-206ENST00000572121 ZCCHC6Q5VYS8 1495 aaKnown RBP29.52■■■□□ 2.32
ITGAE-206ENST00000572121 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
ITGAE-206ENST00000572121 BICRAQ9NZM4 1560 aa29.39■■■□□ 2.3
ITGAE-206ENST00000572121 SHROOM4Q9ULL8 1493 aa29.15■■■□□ 2.26
ITGAE-206ENST00000572121 SCRIBQ14160 1630 aa29.09■■■□□ 2.25
ITGAE-206ENST00000572121 CC2D2AQ9P2K1 1620 aa28.76■■■□□ 2.2
ITGAE-206ENST00000572121 EIF4G1Q04637 1599 aaKnown RBP28.74■■■□□ 2.19
ITGAE-206ENST00000572121 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
ITGAE-206ENST00000572121 DNAJC5Q9H3Z4 198 aa28.14■■■□□ 2.1
ITGAE-206ENST00000572121 NCAPD3P42695 1498 aa27.87■■■□□ 2.05
ITGAE-206ENST00000572121 ATAD2BQ9ULI0 1458 aa27.78■■■□□ 2.04
ITGAE-206ENST00000572121 SMARCA2P51531 1590 aa27.76■■■□□ 2.03
ITGAE-206ENST00000572121 SMARCA4P51532 1647 aa27.75■■■□□ 2.03
ITGAE-206ENST00000572121 BAZ1AQ9NRL2 1556 aaPredicted RBP27.68■■■□□ 2.02
ITGAE-206ENST00000572121 HMGXB3Q12766 1538 aa27.67■■■□□ 2.02
ITGAE-206ENST00000572121 ERCC6Q03468 1493 aa27.61■■■□□ 2.01
ITGAE-206ENST00000572121 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
ITGAE-206ENST00000572121 CUX2O14529 1486 aa27.49■■□□□ 1.99
ITGAE-206ENST00000572121 PEG3Q9GZU2 1588 aa27.47■■□□□ 1.99
ITGAE-206ENST00000572121 MROH2BQ7Z745 1585 aa27.41■■□□□ 1.98
ITGAE-206ENST00000572121 NESP48681 1621 aa27.36■■□□□ 1.97
ITGAE-206ENST00000572121 LAMC3Q9Y6N6 1575 aa27.23■■□□□ 1.95
ITGAE-206ENST00000572121 PDS5BQ9NTI5 1447 aa27.15■■□□□ 1.94
ITGAE-206ENST00000572121 WIZO95785 1651 aa27.07■■□□□ 1.92
ITGAE-206ENST00000572121 CADPSQ9ULU8 1353 aa27.06■■□□□ 1.92
ITGAE-206ENST00000572121 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
ITGAE-206ENST00000572121 KIF21AQ7Z4S6 1674 aa26.98■■□□□ 1.91
ITGAE-206ENST00000572121 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
ITGAE-206ENST00000572121 MRC2Q9UBG0 1479 aa26.86■■□□□ 1.89
ITGAE-206ENST00000572121 CEP164Q9UPV0 1460 aa26.79■■□□□ 1.88
ITGAE-206ENST00000572121 TOP2AP11388 1531 aaKnown RBP26.79■■□□□ 1.88
ITGAE-206ENST00000572121 WDR62O43379 1518 aa26.75■■□□□ 1.87
ITGAE-206ENST00000572121 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
ITGAE-206ENST00000572121 CFTRP13569 1480 aa26.73■■□□□ 1.87
ITGAE-206ENST00000572121 TRIM41Q8WV44 630 aa26.66■■□□□ 1.86
ITGAE-206ENST00000572121 CCDC88BA6NC98 1476 aa26.48■■□□□ 1.83
ITGAE-206ENST00000572121 URB2Q14146 1524 aaKnown RBP26.46■■□□□ 1.83
ITGAE-206ENST00000572121 PRDM2Q13029 1718 aa26.39■■□□□ 1.82
ITGAE-206ENST00000572121 OSCARQ8IYS5 282 aa26.29■■□□□ 1.8
ITGAE-206ENST00000572121 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
ITGAE-206ENST00000572121 IFT140Q96RY7 1462 aa26.24■■□□□ 1.79
ITGAE-206ENST00000572121 TOPBP1Q92547 1522 aa26.21■■□□□ 1.79
ITGAE-206ENST00000572121 DNMBPQ6XZF7 1577 aa26.13■■□□□ 1.77
ITGAE-206ENST00000572121 ZNF608Q9ULD9 1512 aaPredicted RBP26.12■■□□□ 1.77
ITGAE-206ENST00000572121 EIF4G3O43432 1585 aaKnown RBP25.99■■□□□ 1.75
ITGAE-206ENST00000572121 POLA1P09884 1462 aaPredicted RBP25.95■■□□□ 1.74
ITGAE-206ENST00000572121 AQRO60306 1485 aaKnown RBP eCLIP25.93■■□□□ 1.74
ITGAE-206ENST00000572121 TARBP1Q13395 1621 aaKnown RBP25.93■■□□□ 1.74
ITGAE-206ENST00000572121 SOGA1O94964 1423 aa25.88■■□□□ 1.73
ITGAE-206ENST00000572121 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
ITGAE-206ENST00000572121 FBLN2P98095 1184 aa25.86■■□□□ 1.73
ITGAE-206ENST00000572121 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
ITGAE-206ENST00000572121 RIMBP3CA6NJZ7 1639 aa25.82■■□□□ 1.72
ITGAE-206ENST00000572121 RIMBP3BA6NNM3 1639 aa25.82■■□□□ 1.72
ITGAE-206ENST00000572121 RIMBP3Q9UFD9 1639 aa25.82■■□□□ 1.72
ITGAE-206ENST00000572121 TDRD9Q8NDG6 1382 aaKnown RBP25.81■■□□□ 1.72
ITGAE-206ENST00000572121 FGD5Q6ZNL6 1462 aa25.8■■□□□ 1.72
ITGAE-206ENST00000572121 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
ITGAE-206ENST00000572121 CUX1P39880 1505 aa25.76■■□□□ 1.71
ITGAE-206ENST00000572121 WDR97A6NE52 1622 aa25.75■■□□□ 1.71
ITGAE-206ENST00000572121 CHD1O14646 1710 aa25.74■■□□□ 1.71
ITGAE-206ENST00000572121 SNAPC4Q5SXM2 1469 aa25.68■■□□□ 1.7
ITGAE-206ENST00000572121 CHMP7Q8WUX9 453 aaPredicted RBP25.67■■□□□ 1.7
ITGAE-206ENST00000572121 CYB5RLQ6IPT4 315 aa25.66■■□□□ 1.7
ITGAE-206ENST00000572121 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
ITGAE-206ENST00000572121 MAGI1Q96QZ7 1491 aaPredicted RBP25.64■■□□□ 1.69
ITGAE-206ENST00000572121 GAPVD1Q14C86 1478 aa25.56■■□□□ 1.68
ITGAE-206ENST00000572121 SYNJ2O15056 1496 aa25.55■■□□□ 1.68
ITGAE-206ENST00000572121 SYNJ1O43426 1573 aa25.55■■□□□ 1.68
ITGAE-206ENST00000572121 ARAP1Q96P48 1450 aa25.52■■□□□ 1.68
ITGAE-206ENST00000572121 ABCA10Q8WWZ4 1543 aa25.52■■□□□ 1.68
ITGAE-206ENST00000572121 WRNQ14191 1432 aaPredicted RBP eCLIP25.5■■□□□ 1.67
ITGAE-206ENST00000572121 CLASP1Q7Z460 1538 aa25.47■■□□□ 1.67
ITGAE-206ENST00000572121 PBRM1Q86U86 1689 aa25.46■■□□□ 1.67
ITGAE-206ENST00000572121 ABCA5Q8WWZ7 1642 aa25.43■■□□□ 1.66
ITGAE-206ENST00000572121 TRHP20396 242 aaPredicted RBP25.41■■□□□ 1.66
ITGAE-206ENST00000572121 TOP2BQ02880 1626 aa25.38■■□□□ 1.65
ITGAE-206ENST00000572121 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
ITGAE-206ENST00000572121 GRIN2AQ12879 1464 aa25.29■■□□□ 1.64
ITGAE-206ENST00000572121 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
ITGAE-206ENST00000572121 ADAMTS12P58397 1594 aa25.26■■□□□ 1.63
ITGAE-206ENST00000572121 AEBP2Q6ZN18 517 aaPredicted RBP25.23■■□□□ 1.63
ITGAE-206ENST00000572121 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
ITGAE-206ENST00000572121 NUP160Q12769 1436 aa25.19■■□□□ 1.62
ITGAE-206ENST00000572121 CEP170Q5SW79 1584 aa25.14■■□□□ 1.62
ITGAE-206ENST00000572121 ERCC6L2Q5T890 1561 aa25.05■■□□□ 1.6
ITGAE-206ENST00000572121 SHROOM2Q13796 1616 aa25.02■■□□□ 1.6
ITGAE-206ENST00000572121 JPH4Q96JJ6 628 aa24.99■■□□□ 1.59
ITGAE-206ENST00000572121 KIF27Q86VH2 1401 aa24.98■■□□□ 1.59
ITGAE-206ENST00000572121 PRG4Q92954 1404 aaPredicted RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms