RNA–Protein interactions for RNA: ENST00000572031.1

EDC4-203, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 3

Gene EDC4, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-203ENST00000572031 NISCHQ9Y2I1 1504 aa30.27■■■□□ 2.44
EDC4-203ENST00000572031 CCDC180Q9P1Z9 1646 aa27.03■■□□□ 1.92
EDC4-203ENST00000572031 ABCC9O60706 1549 aa26.38■■□□□ 1.81
EDC4-203ENST00000572031 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
EDC4-203ENST00000572031 NACADO15069 1562 aa25.36■■□□□ 1.65
EDC4-203ENST00000572031 ZCCHC6Q5VYS8 1495 aaKnown RBP25.22■■□□□ 1.63
EDC4-203ENST00000572031 MYO15BQ96JP2 1530 aa25.21■■□□□ 1.63
EDC4-203ENST00000572031 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
EDC4-203ENST00000572031 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
EDC4-203ENST00000572031 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.58
EDC4-203ENST00000572031 DNAJC5BQ9UF47 199 aa24.74■■□□□ 1.55
EDC4-203ENST00000572031 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
EDC4-203ENST00000572031 SCRIBQ14160 1630 aa24.59■■□□□ 1.53
EDC4-203ENST00000572031 PABPN1Q86U42 306 aaKnown RBP eCLIP24.57■■□□□ 1.52
EDC4-203ENST00000572031 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
EDC4-203ENST00000572031 EIF4G1Q04637 1599 aaKnown RBP24■■□□□ 1.43
EDC4-203ENST00000572031 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
EDC4-203ENST00000572031 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
EDC4-203ENST00000572031 SMARCA4P51532 1647 aa23.54■■□□□ 1.36
EDC4-203ENST00000572031 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
EDC4-203ENST00000572031 ATAD2BQ9ULI0 1458 aa23.37■■□□□ 1.33
EDC4-203ENST00000572031 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
EDC4-203ENST00000572031 SMARCA2P51531 1590 aa23.36■■□□□ 1.33
EDC4-203ENST00000572031 MROH2BQ7Z745 1585 aa23.32■■□□□ 1.32
EDC4-203ENST00000572031 PEG3Q9GZU2 1588 aa23.32■■□□□ 1.32
EDC4-203ENST00000572031 HMGXB3Q12766 1538 aa23.3■■□□□ 1.32
EDC4-203ENST00000572031 BAZ1BQ9UIG0 1483 aaKnown RBP23.17■■□□□ 1.3
EDC4-203ENST00000572031 WIZO95785 1651 aa23.1■■□□□ 1.29
EDC4-203ENST00000572031 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
EDC4-203ENST00000572031 TOP2AP11388 1531 aaKnown RBP22.84■■□□□ 1.25
EDC4-203ENST00000572031 NESP48681 1621 aa22.83■■□□□ 1.25
EDC4-203ENST00000572031 LAMC3Q9Y6N6 1575 aa22.8■■□□□ 1.24
EDC4-203ENST00000572031 CUX2O14529 1486 aa22.76■■□□□ 1.23
EDC4-203ENST00000572031 ERCC6Q03468 1493 aa22.74■■□□□ 1.23
EDC4-203ENST00000572031 DNAJC5Q9H3Z4 198 aa22.73■■□□□ 1.23
EDC4-203ENST00000572031 CADPSQ9ULU8 1353 aa22.65■■□□□ 1.22
EDC4-203ENST00000572031 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
EDC4-203ENST00000572031 PDS5BQ9NTI5 1447 aa22.58■■□□□ 1.21
EDC4-203ENST00000572031 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.2
EDC4-203ENST00000572031 CFTRP13569 1480 aa22.54■■□□□ 1.2
EDC4-203ENST00000572031 CCDC88BA6NC98 1476 aa22.53■■□□□ 1.2
EDC4-203ENST00000572031 PRDM2Q13029 1718 aa22.51■■□□□ 1.19
EDC4-203ENST00000572031 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
EDC4-203ENST00000572031 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
EDC4-203ENST00000572031 MRC2Q9UBG0 1479 aa22.39■■□□□ 1.17
EDC4-203ENST00000572031 WDR62O43379 1518 aa22.36■■□□□ 1.17
EDC4-203ENST00000572031 SUPT5HO00267 1087 aaKnown RBP22.26■■□□□ 1.15
EDC4-203ENST00000572031 URB2Q14146 1524 aaKnown RBP22.22■■□□□ 1.15
EDC4-203ENST00000572031 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
EDC4-203ENST00000572031 DNMBPQ6XZF7 1577 aa22.07■■□□□ 1.12
EDC4-203ENST00000572031 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
EDC4-203ENST00000572031 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
EDC4-203ENST00000572031 CUX1P39880 1505 aa21.89■■□□□ 1.09
EDC4-203ENST00000572031 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
EDC4-203ENST00000572031 POLA1P09884 1462 aaPredicted RBP21.88■■□□□ 1.09
EDC4-203ENST00000572031 ZNF608Q9ULD9 1512 aaPredicted RBP21.84■■□□□ 1.09
EDC4-203ENST00000572031 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
EDC4-203ENST00000572031 FGD5Q6ZNL6 1462 aa21.81■■□□□ 1.08
EDC4-203ENST00000572031 RAD54L2Q9Y4B4 1467 aa21.76■■□□□ 1.07
EDC4-203ENST00000572031 WDR97A6NE52 1622 aa21.74■■□□□ 1.07
EDC4-203ENST00000572031 BIVM-ERCC5R4GMW8 1640 aa21.74■■□□□ 1.07
EDC4-203ENST00000572031 SOGA1O94964 1423 aa21.73■■□□□ 1.07
EDC4-203ENST00000572031 TOP2BQ02880 1626 aa21.71■■□□□ 1.07
EDC4-203ENST00000572031 SYNJ1O43426 1573 aa21.7■■□□□ 1.06
EDC4-203ENST00000572031 WRNQ14191 1432 aaPredicted RBP eCLIP21.68■■□□□ 1.06
EDC4-203ENST00000572031 AQRO60306 1485 aaKnown RBP eCLIP21.68■■□□□ 1.06
EDC4-203ENST00000572031 OSCARQ8IYS5 282 aa21.66■■□□□ 1.06
EDC4-203ENST00000572031 TRIM41Q8WV44 630 aa21.66■■□□□ 1.06
EDC4-203ENST00000572031 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
EDC4-203ENST00000572031 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
EDC4-203ENST00000572031 ABCA5Q8WWZ7 1642 aa21.58■■□□□ 1.05
EDC4-203ENST00000572031 CHD1O14646 1710 aa21.58■■□□□ 1.05
EDC4-203ENST00000572031 PBRM1Q86U86 1689 aa21.58■■□□□ 1.05
EDC4-203ENST00000572031 GRIN2BQ13224 1484 aa21.52■■□□□ 1.04
EDC4-203ENST00000572031 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
EDC4-203ENST00000572031 SNAPC4Q5SXM2 1469 aa21.51■■□□□ 1.03
EDC4-203ENST00000572031 MAGI1Q96QZ7 1491 aaPredicted RBP21.49■■□□□ 1.03
EDC4-203ENST00000572031 RIMBP3CA6NJZ7 1639 aa21.44■■□□□ 1.02
EDC4-203ENST00000572031 RIMBP3BA6NNM3 1639 aa21.44■■□□□ 1.02
EDC4-203ENST00000572031 RIMBP3Q9UFD9 1639 aa21.44■■□□□ 1.02
EDC4-203ENST00000572031 SYNJ2O15056 1496 aa21.4■■□□□ 1.02
EDC4-203ENST00000572031 ADAMTS12P58397 1594 aa21.37■■□□□ 1.01
EDC4-203ENST00000572031 ARHGEF11O15085 1522 aa21.36■■□□□ 1.01
EDC4-203ENST00000572031 ERICH3Q5RHP9 1530 aa21.35■■□□□ 1.01
EDC4-203ENST00000572031 FBLN2P98095 1184 aa21.35■■□□□ 1.01
EDC4-203ENST00000572031 CLASP1Q7Z460 1538 aa21.31■■□□□ 1
EDC4-203ENST00000572031 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
EDC4-203ENST00000572031 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
EDC4-203ENST00000572031 FHAD1B1AJZ9 1412 aa21.26■□□□□ 0.99
EDC4-203ENST00000572031 KIF27Q86VH2 1401 aa21.22■□□□□ 0.99
EDC4-203ENST00000572031 CEP170Q5SW79 1584 aa21.19■□□□□ 0.98
EDC4-203ENST00000572031 CUL7Q14999 1698 aa21.18■□□□□ 0.98
EDC4-203ENST00000572031 NUP160Q12769 1436 aa21.17■□□□□ 0.98
EDC4-203ENST00000572031 ARAP1Q96P48 1450 aa21.15■□□□□ 0.98
EDC4-203ENST00000572031 IGF1RP08069 1367 aa21.13■□□□□ 0.97
EDC4-203ENST00000572031 CYB5RLQ6IPT4 315 aa21.13■□□□□ 0.97
EDC4-203ENST00000572031 SHROOM2Q13796 1616 aa21.09■□□□□ 0.97
EDC4-203ENST00000572031 RUSC2Q8N2Y8 1516 aa21.07■□□□□ 0.96
EDC4-203ENST00000572031 CARMIL1Q5VZK9 1371 aa20.99■□□□□ 0.95
EDC4-203ENST00000572031 ERCC6L2Q5T890 1561 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms