RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 NISCHQ9Y2I1 1504 aa13.92□□□□□ -0.18
TRAPPC1-204ENST00000571947 AEBP2Q6ZN18 517 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC1-204ENST00000571947 CCDC180Q9P1Z9 1646 aa12.23□□□□□ -0.45
TRAPPC1-204ENST00000571947 CHIC1Q5VXU3 224 aa12.17□□□□□ -0.46
TRAPPC1-204ENST00000571947 ZCCHC6Q5VYS8 1495 aaKnown RBP11.7□□□□□ -0.54
TRAPPC1-204ENST00000571947 DCAF1Q9Y4B6 1507 aa11.54□□□□□ -0.56
TRAPPC1-204ENST00000571947 MYO15BQ96JP2 1530 aa11.38□□□□□ -0.59
TRAPPC1-204ENST00000571947 ABCC9O60706 1549 aa11.37□□□□□ -0.59
TRAPPC1-204ENST00000571947 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
TRAPPC1-204ENST00000571947 NACADO15069 1562 aa11.3□□□□□ -0.6
TRAPPC1-204ENST00000571947 SHROOM4Q9ULL8 1493 aa11.29□□□□□ -0.6
TRAPPC1-204ENST00000571947 RB1CC1Q8TDY2 1594 aa11.2□□□□□ -0.62
TRAPPC1-204ENST00000571947 SCRIBQ14160 1630 aa11.16□□□□□ -0.62
TRAPPC1-204ENST00000571947 UNC13AQ9UPW8 1703 aa11.12□□□□□ -0.63
TRAPPC1-204ENST00000571947 BICRAQ9NZM4 1560 aa10.87□□□□□ -0.67
TRAPPC1-204ENST00000571947 SUPT5HO00267 1087 aaKnown RBP10.87□□□□□ -0.67
TRAPPC1-204ENST00000571947 SENP3Q9H4L4 574 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC1-204ENST00000571947 RSF1Q96T23 1441 aaPredicted RBP10.77□□□□□ -0.68
TRAPPC1-204ENST00000571947 CECR2Q9BXF3 1484 aa10.77□□□□□ -0.69
TRAPPC1-204ENST00000571947 BAZ1AQ9NRL2 1556 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC1-204ENST00000571947 MROH2BQ7Z745 1585 aa10.74□□□□□ -0.69
TRAPPC1-204ENST00000571947 SMARCA4P51532 1647 aa10.73□□□□□ -0.69
TRAPPC1-204ENST00000571947 WIZO95785 1651 aa10.72□□□□□ -0.69
TRAPPC1-204ENST00000571947 PHF23Q9BUL5 403 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC1-204ENST00000571947 PABPN1Q86U42 306 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRAPPC1-204ENST00000571947 PEG3Q9GZU2 1588 aa10.6□□□□□ -0.71
TRAPPC1-204ENST00000571947 TOP2AP11388 1531 aaKnown RBP10.58□□□□□ -0.72
TRAPPC1-204ENST00000571947 SMARCA2P51531 1590 aa10.52□□□□□ -0.73
TRAPPC1-204ENST00000571947 EIF4G1Q04637 1599 aaKnown RBP10.51□□□□□ -0.73
TRAPPC1-204ENST00000571947 ATAD2BQ9ULI0 1458 aa10.48□□□□□ -0.73
TRAPPC1-204ENST00000571947 CCDC88BA6NC98 1476 aa10.42□□□□□ -0.74
TRAPPC1-204ENST00000571947 BAZ1BQ9UIG0 1483 aaKnown RBP10.42□□□□□ -0.74
TRAPPC1-204ENST00000571947 HMGXB3Q12766 1538 aa10.42□□□□□ -0.74
TRAPPC1-204ENST00000571947 NCAPD3P42695 1498 aa10.38□□□□□ -0.75
TRAPPC1-204ENST00000571947 CC2D2AQ9P2K1 1620 aa10.36□□□□□ -0.75
TRAPPC1-204ENST00000571947 PRDM2Q13029 1718 aa10.34□□□□□ -0.75
TRAPPC1-204ENST00000571947 ABCC8Q09428 1581 aa10.25□□□□□ -0.77
TRAPPC1-204ENST00000571947 TRIM41Q8WV44 630 aa10.23□□□□□ -0.77
TRAPPC1-204ENST00000571947 BIVM-ERCC5R4GMW8 1640 aa10.16□□□□□ -0.78
TRAPPC1-204ENST00000571947 CFTRP13569 1480 aa10.16□□□□□ -0.78
TRAPPC1-204ENST00000571947 SYNJ1O43426 1573 aa10.15□□□□□ -0.78
TRAPPC1-204ENST00000571947 WRNQ14191 1432 aaPredicted RBP eCLIP10.14□□□□□ -0.79
TRAPPC1-204ENST00000571947 TOP2BQ02880 1626 aa10.12□□□□□ -0.79
TRAPPC1-204ENST00000571947 CADPSQ9ULU8 1353 aa10.09□□□□□ -0.79
TRAPPC1-204ENST00000571947 LAMC3Q9Y6N6 1575 aa10.08□□□□□ -0.8
TRAPPC1-204ENST00000571947 FOXD1Q16676 465 aa10.05□□□□□ -0.8
TRAPPC1-204ENST00000571947 CUX1P39880 1505 aa10.05□□□□□ -0.8
TRAPPC1-204ENST00000571947 LOC105371045A0A1W2PR82 267 aa10.04□□□□□ -0.8
TRAPPC1-204ENST00000571947 EEA1Q15075 1411 aa10.04□□□□□ -0.8
TRAPPC1-204ENST00000571947 FAM9AQ8IZU1 332 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC1-204ENST00000571947 KIF21AQ7Z4S6 1674 aa10.02□□□□□ -0.81
TRAPPC1-204ENST00000571947 SOGA1O94964 1423 aa10.01□□□□□ -0.81
TRAPPC1-204ENST00000571947 NESP48681 1621 aa10.01□□□□□ -0.81
TRAPPC1-204ENST00000571947 FANCD2Q9BXW9 1451 aa10□□□□□ -0.81
TRAPPC1-204ENST00000571947 RUSC2Q8N2Y8 1516 aa10□□□□□ -0.81
TRAPPC1-204ENST00000571947 DNMBPQ6XZF7 1577 aa9.97□□□□□ -0.81
TRAPPC1-204ENST00000571947 KIF21BO75037 1637 aa9.97□□□□□ -0.81
TRAPPC1-204ENST00000571947 DNAJC5BQ9UF47 199 aa9.95□□□□□ -0.82
TRAPPC1-204ENST00000571947 CEP164Q9UPV0 1460 aa9.94□□□□□ -0.82
TRAPPC1-204ENST00000571947 CSRNP3Q8WYN3 585 aa9.93□□□□□ -0.82
TRAPPC1-204ENST00000571947 TOPBP1Q92547 1522 aa9.92□□□□□ -0.82
TRAPPC1-204ENST00000571947 FGD5Q6ZNL6 1462 aa9.92□□□□□ -0.82
TRAPPC1-204ENST00000571947 PDS5BQ9NTI5 1447 aa9.92□□□□□ -0.82
TRAPPC1-204ENST00000571947 WDR97A6NE52 1622 aa9.92□□□□□ -0.82
TRAPPC1-204ENST00000571947 GOLGA3Q08378 1498 aa9.9□□□□□ -0.83
TRAPPC1-204ENST00000571947 URB2Q14146 1524 aaKnown RBP9.88□□□□□ -0.83
TRAPPC1-204ENST00000571947 KIF27Q86VH2 1401 aa9.88□□□□□ -0.83
TRAPPC1-204ENST00000571947 ERICH3Q5RHP9 1530 aa9.87□□□□□ -0.83
TRAPPC1-204ENST00000571947 TNIKQ9UKE5 1360 aa9.86□□□□□ -0.83
TRAPPC1-204ENST00000571947 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC1-204ENST00000571947 EHMT2Q96KQ7 1210 aa9.85□□□□□ -0.83
TRAPPC1-204ENST00000571947 CUX2O14529 1486 aa9.85□□□□□ -0.83
TRAPPC1-204ENST00000571947 ABCA10Q8WWZ4 1543 aa9.84□□□□□ -0.83
TRAPPC1-204ENST00000571947 PRXQ9BXM0 1461 aa9.84□□□□□ -0.83
TRAPPC1-204ENST00000571947 MRC2Q9UBG0 1479 aa9.82□□□□□ -0.84
TRAPPC1-204ENST00000571947 RAPGEF2Q9Y4G8 1499 aa9.82□□□□□ -0.84
TRAPPC1-204ENST00000571947 TARBP1Q13395 1621 aaKnown RBP9.82□□□□□ -0.84
TRAPPC1-204ENST00000571947 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
TRAPPC1-204ENST00000571947 CUL7Q14999 1698 aa9.81□□□□□ -0.84
TRAPPC1-204ENST00000571947 RAD54L2Q9Y4B4 1467 aa9.81□□□□□ -0.84
TRAPPC1-204ENST00000571947 PBRM1Q86U86 1689 aa9.8□□□□□ -0.84
TRAPPC1-204ENST00000571947 CEP162Q5TB80 1403 aa9.8□□□□□ -0.84
TRAPPC1-204ENST00000571947 WDR62O43379 1518 aa9.79□□□□□ -0.84
TRAPPC1-204ENST00000571947 UBTFP17480 764 aaKnown RBP9.79□□□□□ -0.84
TRAPPC1-204ENST00000571947 THOC2Q8NI27 1593 aaKnown RBP9.79□□□□□ -0.84
TRAPPC1-204ENST00000571947 PLPPR3Q6T4P5 718 aa9.78□□□□□ -0.84
TRAPPC1-204ENST00000571947 CTTNBP2Q8WZ74 1663 aa9.77□□□□□ -0.84
TRAPPC1-204ENST00000571947 IGF1RP08069 1367 aa9.76□□□□□ -0.85
TRAPPC1-204ENST00000571947 ERCC6Q03468 1493 aa9.73□□□□□ -0.85
TRAPPC1-204ENST00000571947 CARMIL1Q5VZK9 1371 aa9.72□□□□□ -0.85
TRAPPC1-204ENST00000571947 CLIP1P30622 1438 aa9.72□□□□□ -0.85
TRAPPC1-204ENST00000571947 GAPVD1Q14C86 1478 aa9.72□□□□□ -0.85
TRAPPC1-204ENST00000571947 IFT140Q96RY7 1462 aa9.7□□□□□ -0.86
TRAPPC1-204ENST00000571947 TDRD9Q8NDG6 1382 aaKnown RBP9.68□□□□□ -0.86
TRAPPC1-204ENST00000571947 EIF4G3O43432 1585 aaKnown RBP9.67□□□□□ -0.86
TRAPPC1-204ENST00000571947 ADAMTS12P58397 1594 aa9.67□□□□□ -0.86
TRAPPC1-204ENST00000571947 VPS8Q8N3P4 1428 aa9.65□□□□□ -0.86
TRAPPC1-204ENST00000571947 TRIM26Q12899 539 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC1-204ENST00000571947 ARAP1Q96P48 1450 aa9.65□□□□□ -0.87
TRAPPC1-204ENST00000571947 GRIN2BQ13224 1484 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms