RNA–Protein interactions for RNA: ENST00000571937.1

ITGAE-205, Transcript of integrin subunit alpha E, humanhuman

TSL 2

Gene ITGAE, Length 1,982 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-205ENST00000571937 NISCHQ9Y2I1 1504 aa22.12■■□□□ 1.13
ITGAE-205ENST00000571937 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
ITGAE-205ENST00000571937 ABCC9O60706 1549 aa18.99■□□□□ 0.63
ITGAE-205ENST00000571937 DCAF8L2P0C7V8 631 aa18.63■□□□□ 0.57
ITGAE-205ENST00000571937 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
ITGAE-205ENST00000571937 NACADO15069 1562 aa18.28■□□□□ 0.52
ITGAE-205ENST00000571937 RB1CC1Q8TDY2 1594 aa18.26■□□□□ 0.51
ITGAE-205ENST00000571937 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
ITGAE-205ENST00000571937 MYO15BQ96JP2 1530 aa18.17■□□□□ 0.5
ITGAE-205ENST00000571937 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
ITGAE-205ENST00000571937 SCRIBQ14160 1630 aa17.95■□□□□ 0.46
ITGAE-205ENST00000571937 UNC13AQ9UPW8 1703 aa17.87■□□□□ 0.45
ITGAE-205ENST00000571937 PABPN1Q86U42 306 aaKnown RBP eCLIP17.86■□□□□ 0.45
ITGAE-205ENST00000571937 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
ITGAE-205ENST00000571937 SUPT5HO00267 1087 aaKnown RBP17.44■□□□□ 0.38
ITGAE-205ENST00000571937 CECR2Q9BXF3 1484 aa17.28■□□□□ 0.36
ITGAE-205ENST00000571937 EIF4G1Q04637 1599 aaKnown RBP17.24■□□□□ 0.35
ITGAE-205ENST00000571937 DNAJC5BQ9UF47 199 aa17.23■□□□□ 0.35
ITGAE-205ENST00000571937 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
ITGAE-205ENST00000571937 CC2D2AQ9P2K1 1620 aa17.13■□□□□ 0.33
ITGAE-205ENST00000571937 BAZ1AQ9NRL2 1556 aaPredicted RBP17.12■□□□□ 0.33
ITGAE-205ENST00000571937 SMARCA4P51532 1647 aa17.11■□□□□ 0.33
ITGAE-205ENST00000571937 MROH2BQ7Z745 1585 aa17.1■□□□□ 0.33
ITGAE-205ENST00000571937 ATAD2BQ9ULI0 1458 aa16.96■□□□□ 0.31
ITGAE-205ENST00000571937 WIZO95785 1651 aa16.94■□□□□ 0.3
ITGAE-205ENST00000571937 SMARCA2P51531 1590 aa16.92■□□□□ 0.3
ITGAE-205ENST00000571937 NCAPD3P42695 1498 aa16.88■□□□□ 0.29
ITGAE-205ENST00000571937 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
ITGAE-205ENST00000571937 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
ITGAE-205ENST00000571937 HMGXB3Q12766 1538 aa16.8■□□□□ 0.28
ITGAE-205ENST00000571937 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
ITGAE-205ENST00000571937 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
ITGAE-205ENST00000571937 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
ITGAE-205ENST00000571937 NESP48681 1621 aa16.51■□□□□ 0.23
ITGAE-205ENST00000571937 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
ITGAE-205ENST00000571937 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
ITGAE-205ENST00000571937 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
ITGAE-205ENST00000571937 CFTRP13569 1480 aa16.38■□□□□ 0.21
ITGAE-205ENST00000571937 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
ITGAE-205ENST00000571937 PDS5BQ9NTI5 1447 aa16.31■□□□□ 0.2
ITGAE-205ENST00000571937 FANCD2Q9BXW9 1451 aa16.28■□□□□ 0.2
ITGAE-205ENST00000571937 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.2
ITGAE-205ENST00000571937 ABCC8Q09428 1581 aa16.24■□□□□ 0.19
ITGAE-205ENST00000571937 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
ITGAE-205ENST00000571937 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
ITGAE-205ENST00000571937 WRNQ14191 1432 aaPredicted RBP eCLIP16.16■□□□□ 0.18
ITGAE-205ENST00000571937 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
ITGAE-205ENST00000571937 FAM9AQ8IZU1 332 aaPredicted RBP16.11■□□□□ 0.17
ITGAE-205ENST00000571937 THOC2Q8NI27 1593 aaKnown RBP16.1■□□□□ 0.17
ITGAE-205ENST00000571937 URB2Q14146 1524 aaKnown RBP16.1■□□□□ 0.17
ITGAE-205ENST00000571937 SYNJ1O43426 1573 aa16.05■□□□□ 0.16
ITGAE-205ENST00000571937 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
ITGAE-205ENST00000571937 WDR62O43379 1518 aa16.02■□□□□ 0.16
ITGAE-205ENST00000571937 CUX1P39880 1505 aa16.02■□□□□ 0.15
ITGAE-205ENST00000571937 LOC105371045A0A1W2PR82 267 aa16.01■□□□□ 0.15
ITGAE-205ENST00000571937 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
ITGAE-205ENST00000571937 TOP2BQ02880 1626 aa15.99■□□□□ 0.15
ITGAE-205ENST00000571937 CUX2O14529 1486 aa15.95■□□□□ 0.14
ITGAE-205ENST00000571937 SOGA1O94964 1423 aa15.95■□□□□ 0.14
ITGAE-205ENST00000571937 BIVM-ERCC5R4GMW8 1640 aa15.95■□□□□ 0.14
ITGAE-205ENST00000571937 FGD5Q6ZNL6 1462 aa15.93■□□□□ 0.14
ITGAE-205ENST00000571937 POLA1P09884 1462 aaPredicted RBP15.92■□□□□ 0.14
ITGAE-205ENST00000571937 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
ITGAE-205ENST00000571937 EEA1Q15075 1411 aa15.91■□□□□ 0.14
ITGAE-205ENST00000571937 RAD54L2Q9Y4B4 1467 aa15.9■□□□□ 0.14
ITGAE-205ENST00000571937 RUSC2Q8N2Y8 1516 aa15.87■□□□□ 0.13
ITGAE-205ENST00000571937 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
ITGAE-205ENST00000571937 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
ITGAE-205ENST00000571937 ZNF608Q9ULD9 1512 aaPredicted RBP15.83■□□□□ 0.12
ITGAE-205ENST00000571937 TDRD9Q8NDG6 1382 aaKnown RBP15.82■□□□□ 0.12
ITGAE-205ENST00000571937 TARBP1Q13395 1621 aaKnown RBP15.81■□□□□ 0.12
ITGAE-205ENST00000571937 AQRO60306 1485 aaKnown RBP eCLIP15.79■□□□□ 0.12
ITGAE-205ENST00000571937 KIF27Q86VH2 1401 aa15.77■□□□□ 0.11
ITGAE-205ENST00000571937 ABCA10Q8WWZ4 1543 aa15.74■□□□□ 0.11
ITGAE-205ENST00000571937 EIF4G3O43432 1585 aaKnown RBP15.73■□□□□ 0.11
ITGAE-205ENST00000571937 UBTFP17480 764 aaKnown RBP15.71■□□□□ 0.11
ITGAE-205ENST00000571937 WDR97A6NE52 1622 aa15.71■□□□□ 0.11
ITGAE-205ENST00000571937 GOLGA3Q08378 1498 aa15.69■□□□□ 0.1
ITGAE-205ENST00000571937 GAPVD1Q14C86 1478 aa15.69■□□□□ 0.1
ITGAE-205ENST00000571937 KIF21BO75037 1637 aa15.66■□□□□ 0.1
ITGAE-205ENST00000571937 ABCA5Q8WWZ7 1642 aa15.65■□□□□ 0.1
ITGAE-205ENST00000571937 FBLN2P98095 1184 aa15.64■□□□□ 0.09
ITGAE-205ENST00000571937 TNIKQ9UKE5 1360 aa15.64■□□□□ 0.09
ITGAE-205ENST00000571937 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
ITGAE-205ENST00000571937 RAPGEF2Q9Y4G8 1499 aa15.62■□□□□ 0.09
ITGAE-205ENST00000571937 IGF1RP08069 1367 aa15.62■□□□□ 0.09
ITGAE-205ENST00000571937 SNAPC4Q5SXM2 1469 aa15.61■□□□□ 0.09
ITGAE-205ENST00000571937 PRXQ9BXM0 1461 aa15.61■□□□□ 0.09
ITGAE-205ENST00000571937 PBRM1Q86U86 1689 aa15.61■□□□□ 0.09
ITGAE-205ENST00000571937 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
ITGAE-205ENST00000571937 CHMP7Q8WUX9 453 aaPredicted RBP15.56■□□□□ 0.08
ITGAE-205ENST00000571937 CARMIL1Q5VZK9 1371 aa15.56■□□□□ 0.08
ITGAE-205ENST00000571937 CEP162Q5TB80 1403 aa15.56■□□□□ 0.08
ITGAE-205ENST00000571937 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
ITGAE-205ENST00000571937 RANGAP1P46060 587 aaPredicted RBP15.5■□□□□ 0.07
ITGAE-205ENST00000571937 SYNJ2O15056 1496 aa15.49■□□□□ 0.07
ITGAE-205ENST00000571937 FHAD1B1AJZ9 1412 aa15.49■□□□□ 0.07
ITGAE-205ENST00000571937 ADAMTS12P58397 1594 aa15.48■□□□□ 0.07
ITGAE-205ENST00000571937 CHD1O14646 1710 aa15.48■□□□□ 0.07
ITGAE-205ENST00000571937 CUL7Q14999 1698 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms