RNA–Protein interactions for RNA: ENST00000571800.5

SCIMP-202, Transcript of SLP adaptor and CSK interacting membrane protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCIMP, Length 2,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCIMP-202ENST00000571800 NISCHQ9Y2I1 1504 aa21.61■■□□□ 1.05
SCIMP-202ENST00000571800 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
SCIMP-202ENST00000571800 ZCCHC6Q5VYS8 1495 aaKnown RBP18.18■□□□□ 0.5
SCIMP-202ENST00000571800 AEBP2Q6ZN18 517 aaPredicted RBP17.92■□□□□ 0.46
SCIMP-202ENST00000571800 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.44
SCIMP-202ENST00000571800 DCAF8L2P0C7V8 631 aa17.81■□□□□ 0.44
SCIMP-202ENST00000571800 SHROOM4Q9ULL8 1493 aa17.76■□□□□ 0.43
SCIMP-202ENST00000571800 ABCC9O60706 1549 aa17.69■□□□□ 0.42
SCIMP-202ENST00000571800 CHIC1Q5VXU3 224 aa17.66■□□□□ 0.42
SCIMP-202ENST00000571800 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
SCIMP-202ENST00000571800 NACADO15069 1562 aa17.43■□□□□ 0.38
SCIMP-202ENST00000571800 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
SCIMP-202ENST00000571800 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
SCIMP-202ENST00000571800 SUPT5HO00267 1087 aaKnown RBP17.11■□□□□ 0.33
SCIMP-202ENST00000571800 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
SCIMP-202ENST00000571800 CECR2Q9BXF3 1484 aa16.84■□□□□ 0.29
SCIMP-202ENST00000571800 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
SCIMP-202ENST00000571800 BICRAQ9NZM4 1560 aa16.82■□□□□ 0.28
SCIMP-202ENST00000571800 MROH2BQ7Z745 1585 aa16.74■□□□□ 0.27
SCIMP-202ENST00000571800 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
SCIMP-202ENST00000571800 BAZ1AQ9NRL2 1556 aaPredicted RBP16.64■□□□□ 0.25
SCIMP-202ENST00000571800 WIZO95785 1651 aa16.61■□□□□ 0.25
SCIMP-202ENST00000571800 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
SCIMP-202ENST00000571800 TOP2AP11388 1531 aaKnown RBP16.38■□□□□ 0.21
SCIMP-202ENST00000571800 PEG3Q9GZU2 1588 aa16.37■□□□□ 0.21
SCIMP-202ENST00000571800 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
SCIMP-202ENST00000571800 SMARCA2P51531 1590 aa16.27■□□□□ 0.19
SCIMP-202ENST00000571800 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
SCIMP-202ENST00000571800 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
SCIMP-202ENST00000571800 BAZ1BQ9UIG0 1483 aaKnown RBP16.17■□□□□ 0.18
SCIMP-202ENST00000571800 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
SCIMP-202ENST00000571800 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
SCIMP-202ENST00000571800 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
SCIMP-202ENST00000571800 CC2D2AQ9P2K1 1620 aa16■□□□□ 0.15
SCIMP-202ENST00000571800 ABCC8Q09428 1581 aa15.97■□□□□ 0.15
SCIMP-202ENST00000571800 PHF23Q9BUL5 403 aaPredicted RBP15.93■□□□□ 0.14
SCIMP-202ENST00000571800 LOC105371045A0A1W2PR82 267 aa15.87■□□□□ 0.13
SCIMP-202ENST00000571800 CFTRP13569 1480 aa15.8■□□□□ 0.12
SCIMP-202ENST00000571800 FAM9AQ8IZU1 332 aaPredicted RBP15.8■□□□□ 0.12
SCIMP-202ENST00000571800 WRNQ14191 1432 aaPredicted RBP eCLIP15.8■□□□□ 0.12
SCIMP-202ENST00000571800 SYNJ1O43426 1573 aa15.78■□□□□ 0.12
SCIMP-202ENST00000571800 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.11
SCIMP-202ENST00000571800 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
SCIMP-202ENST00000571800 SOGA1O94964 1423 aa15.7■□□□□ 0.1
SCIMP-202ENST00000571800 PRDM2Q13029 1718 aa15.7■□□□□ 0.1
SCIMP-202ENST00000571800 TOP2BQ02880 1626 aa15.67■□□□□ 0.1
SCIMP-202ENST00000571800 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
SCIMP-202ENST00000571800 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
SCIMP-202ENST00000571800 CUX1P39880 1505 aa15.63■□□□□ 0.09
SCIMP-202ENST00000571800 NESP48681 1621 aa15.6■□□□□ 0.09
SCIMP-202ENST00000571800 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
SCIMP-202ENST00000571800 EEA1Q15075 1411 aa15.58■□□□□ 0.08
SCIMP-202ENST00000571800 FANCD2Q9BXW9 1451 aa15.54■□□□□ 0.08
SCIMP-202ENST00000571800 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
SCIMP-202ENST00000571800 LAMC3Q9Y6N6 1575 aa15.52■□□□□ 0.07
SCIMP-202ENST00000571800 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
SCIMP-202ENST00000571800 KIF21BO75037 1637 aa15.42■□□□□ 0.06
SCIMP-202ENST00000571800 DNMBPQ6XZF7 1577 aa15.41■□□□□ 0.06
SCIMP-202ENST00000571800 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
SCIMP-202ENST00000571800 GOLGA3Q08378 1498 aa15.4■□□□□ 0.06
SCIMP-202ENST00000571800 TOPBP1Q92547 1522 aa15.4■□□□□ 0.06
SCIMP-202ENST00000571800 TNIKQ9UKE5 1360 aa15.39■□□□□ 0.05
SCIMP-202ENST00000571800 PDS5BQ9NTI5 1447 aa15.38■□□□□ 0.05
SCIMP-202ENST00000571800 KIF21AQ7Z4S6 1674 aa15.38■□□□□ 0.05
SCIMP-202ENST00000571800 SENP3Q9H4L4 574 aaPredicted RBP15.38■□□□□ 0.05
SCIMP-202ENST00000571800 URB2Q14146 1524 aaKnown RBP15.37■□□□□ 0.05
SCIMP-202ENST00000571800 KIF27Q86VH2 1401 aa15.37■□□□□ 0.05
SCIMP-202ENST00000571800 RAPGEF2Q9Y4G8 1499 aa15.35■□□□□ 0.05
SCIMP-202ENST00000571800 PRXQ9BXM0 1461 aa15.34■□□□□ 0.05
SCIMP-202ENST00000571800 UBTFP17480 764 aaKnown RBP15.34■□□□□ 0.05
SCIMP-202ENST00000571800 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.05
SCIMP-202ENST00000571800 CEP162Q5TB80 1403 aa15.33■□□□□ 0.04
SCIMP-202ENST00000571800 CUX2O14529 1486 aa15.33■□□□□ 0.04
SCIMP-202ENST00000571800 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
SCIMP-202ENST00000571800 ERICH3Q5RHP9 1530 aa15.28■□□□□ 0.04
SCIMP-202ENST00000571800 IGF1RP08069 1367 aa15.28■□□□□ 0.04
SCIMP-202ENST00000571800 ABCA10Q8WWZ4 1543 aa15.27■□□□□ 0.04
SCIMP-202ENST00000571800 WDR97A6NE52 1622 aa15.24■□□□□ 0.03
SCIMP-202ENST00000571800 MRC2Q9UBG0 1479 aa15.21■□□□□ 0.02
SCIMP-202ENST00000571800 PCGF6Q9BYE7 350 aa15.21■□□□□ 0.02
SCIMP-202ENST00000571800 CLIP1P30622 1438 aa15.17■□□□□ 0.02
SCIMP-202ENST00000571800 TARBP1Q13395 1621 aaKnown RBP15.17■□□□□ 0.02
SCIMP-202ENST00000571800 CARMIL1Q5VZK9 1371 aa15.17■□□□□ 0.02
SCIMP-202ENST00000571800 ABCA5Q8WWZ7 1642 aa15.15■□□□□ 0.02
SCIMP-202ENST00000571800 TDRD9Q8NDG6 1382 aaKnown RBP15.14■□□□□ 0.01
SCIMP-202ENST00000571800 WDR62O43379 1518 aa15.14■□□□□ 0.01
SCIMP-202ENST00000571800 TRIM26Q12899 539 aaPredicted RBP15.14■□□□□ 0.01
SCIMP-202ENST00000571800 PPARGC1BQ86YN6 1023 aaKnown RBP15.12■□□□□ 0.01
SCIMP-202ENST00000571800 RANGAP1P46060 587 aaPredicted RBP15.1■□□□□ 0.01
SCIMP-202ENST00000571800 GAPVD1Q14C86 1478 aa15.1■□□□□ 0.01
SCIMP-202ENST00000571800 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
SCIMP-202ENST00000571800 ERCC6Q03468 1493 aa15.09■□□□□ 0.01
SCIMP-202ENST00000571800 CUL7Q14999 1698 aa15.08■□□□□ 0
SCIMP-202ENST00000571800 ARAP1Q96P48 1450 aa15.06■□□□□ 0
SCIMP-202ENST00000571800 VPS8Q8N3P4 1428 aa15.06■□□□□ 0
SCIMP-202ENST00000571800 AQRO60306 1485 aaKnown RBP eCLIP15.03■□□□□ -0
SCIMP-202ENST00000571800 IFT140Q96RY7 1462 aa15.02■□□□□ -0
SCIMP-202ENST00000571800 ARHGAP35Q9NRY4 1499 aa15.02■□□□□ -0
SCIMP-202ENST00000571800 ZNF608Q9ULD9 1512 aaPredicted RBP15.02□□□□□ -0.01
SCIMP-202ENST00000571800 PBRM1Q86U86 1689 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms