RNA–Protein interactions for RNA: ENST00000571790.5

NUBP1-204, Transcript of nucleotide binding protein 1, humanhuman

TSL 1 (best)

Gene NUBP1, Length 1,137 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1-204ENST00000571790 NISCHQ9Y2I1 1504 aa33.4■■■□□ 2.94
NUBP1-204ENST00000571790 ABCC9O60706 1549 aa30.58■■■□□ 2.49
NUBP1-204ENST00000571790 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
NUBP1-204ENST00000571790 DNAJC5BQ9UF47 199 aa29.01■■■□□ 2.23
NUBP1-204ENST00000571790 RB1CC1Q8TDY2 1594 aa28.88■■■□□ 2.21
NUBP1-204ENST00000571790 NACADO15069 1562 aa28.58■■■□□ 2.17
NUBP1-204ENST00000571790 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
NUBP1-204ENST00000571790 PABPN1Q86U42 306 aaKnown RBP eCLIP28.43■■■□□ 2.14
NUBP1-204ENST00000571790 UNC13AQ9UPW8 1703 aa28.19■■■□□ 2.1
NUBP1-204ENST00000571790 BICRAQ9NZM4 1560 aa28.05■■■□□ 2.08
NUBP1-204ENST00000571790 MYO15BQ96JP2 1530 aa28.02■■■□□ 2.08
NUBP1-204ENST00000571790 ZCCHC6Q5VYS8 1495 aaKnown RBP27.61■■■□□ 2.01
NUBP1-204ENST00000571790 SHROOM4Q9ULL8 1493 aa27.61■■■□□ 2.01
NUBP1-204ENST00000571790 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
NUBP1-204ENST00000571790 CC2D2AQ9P2K1 1620 aa27.57■■■□□ 2
NUBP1-204ENST00000571790 DCAF1Q9Y4B6 1507 aa27.52■■■□□ 2
NUBP1-204ENST00000571790 SCRIBQ14160 1630 aa27.5■■□□□ 1.99
NUBP1-204ENST00000571790 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
NUBP1-204ENST00000571790 DNAJC5Q9H3Z4 198 aa26.9■■□□□ 1.9
NUBP1-204ENST00000571790 CUX2O14529 1486 aa26.48■■□□□ 1.83
NUBP1-204ENST00000571790 ERCC6Q03468 1493 aa26.45■■□□□ 1.82
NUBP1-204ENST00000571790 NCAPD3P42695 1498 aa26.38■■□□□ 1.81
NUBP1-204ENST00000571790 ATAD2BQ9ULI0 1458 aa26.28■■□□□ 1.8
NUBP1-204ENST00000571790 SMARCA2P51531 1590 aa26.17■■□□□ 1.78
NUBP1-204ENST00000571790 HMGXB3Q12766 1538 aa26.16■■□□□ 1.78
NUBP1-204ENST00000571790 NESP48681 1621 aa26.15■■□□□ 1.78
NUBP1-204ENST00000571790 SMARCA4P51532 1647 aa26.14■■□□□ 1.78
NUBP1-204ENST00000571790 BAZ1BQ9UIG0 1483 aaKnown RBP26.03■■□□□ 1.76
NUBP1-204ENST00000571790 BAZ1AQ9NRL2 1556 aaPredicted RBP25.95■■□□□ 1.75
NUBP1-204ENST00000571790 THOC2Q8NI27 1593 aaKnown RBP25.94■■□□□ 1.74
NUBP1-204ENST00000571790 PEG3Q9GZU2 1588 aa25.86■■□□□ 1.73
NUBP1-204ENST00000571790 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
NUBP1-204ENST00000571790 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
NUBP1-204ENST00000571790 MROH2BQ7Z745 1585 aa25.75■■□□□ 1.71
NUBP1-204ENST00000571790 PDS5BQ9NTI5 1447 aa25.74■■□□□ 1.71
NUBP1-204ENST00000571790 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
NUBP1-204ENST00000571790 CADPSQ9ULU8 1353 aa25.59■■□□□ 1.69
NUBP1-204ENST00000571790 MRC2Q9UBG0 1479 aa25.56■■□□□ 1.68
NUBP1-204ENST00000571790 WDR62O43379 1518 aa25.5■■□□□ 1.67
NUBP1-204ENST00000571790 WIZO95785 1651 aa25.42■■□□□ 1.66
NUBP1-204ENST00000571790 CEP164Q9UPV0 1460 aa25.39■■□□□ 1.65
NUBP1-204ENST00000571790 FANCD2Q9BXW9 1451 aa25.32■■□□□ 1.64
NUBP1-204ENST00000571790 OSCARQ8IYS5 282 aa25.21■■□□□ 1.63
NUBP1-204ENST00000571790 CFTRP13569 1480 aa25.21■■□□□ 1.63
NUBP1-204ENST00000571790 URB2Q14146 1524 aaKnown RBP25.13■■□□□ 1.61
NUBP1-204ENST00000571790 TOP2AP11388 1531 aaKnown RBP25.07■■□□□ 1.6
NUBP1-204ENST00000571790 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
NUBP1-204ENST00000571790 RIMBP3CA6NJZ7 1639 aa24.93■■□□□ 1.58
NUBP1-204ENST00000571790 RIMBP3BA6NNM3 1639 aa24.93■■□□□ 1.58
NUBP1-204ENST00000571790 RIMBP3Q9UFD9 1639 aa24.93■■□□□ 1.58
NUBP1-204ENST00000571790 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
NUBP1-204ENST00000571790 PRDM2Q13029 1718 aa24.88■■□□□ 1.57
NUBP1-204ENST00000571790 IFT140Q96RY7 1462 aa24.88■■□□□ 1.57
NUBP1-204ENST00000571790 ARHGEF11O15085 1522 aa24.82■■□□□ 1.56
NUBP1-204ENST00000571790 CCDC88BA6NC98 1476 aa24.79■■□□□ 1.56
NUBP1-204ENST00000571790 TOPBP1Q92547 1522 aa24.79■■□□□ 1.56
NUBP1-204ENST00000571790 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
NUBP1-204ENST00000571790 CYB5RLQ6IPT4 315 aa24.68■■□□□ 1.54
NUBP1-204ENST00000571790 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
NUBP1-204ENST00000571790 DNMBPQ6XZF7 1577 aa24.66■■□□□ 1.54
NUBP1-204ENST00000571790 AQRO60306 1485 aaKnown RBP eCLIP24.62■■□□□ 1.53
NUBP1-204ENST00000571790 CHD1O14646 1710 aa24.61■■□□□ 1.53
NUBP1-204ENST00000571790 FBLN2P98095 1184 aa24.58■■□□□ 1.53
NUBP1-204ENST00000571790 ARAP1Q96P48 1450 aa24.57■■□□□ 1.52
NUBP1-204ENST00000571790 TARBP1Q13395 1621 aaKnown RBP24.57■■□□□ 1.52
NUBP1-204ENST00000571790 TRHP20396 242 aaPredicted RBP24.56■■□□□ 1.52
NUBP1-204ENST00000571790 POLA1P09884 1462 aaPredicted RBP24.51■■□□□ 1.51
NUBP1-204ENST00000571790 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.51
NUBP1-204ENST00000571790 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
NUBP1-204ENST00000571790 SOGA1O94964 1423 aa24.39■■□□□ 1.5
NUBP1-204ENST00000571790 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
NUBP1-204ENST00000571790 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
NUBP1-204ENST00000571790 CLASP1Q7Z460 1538 aa24.31■■□□□ 1.48
NUBP1-204ENST00000571790 CHMP7Q8WUX9 453 aaPredicted RBP24.3■■□□□ 1.48
NUBP1-204ENST00000571790 SYNJ1O43426 1573 aa24.27■■□□□ 1.48
NUBP1-204ENST00000571790 WDR97A6NE52 1622 aa24.27■■□□□ 1.48
NUBP1-204ENST00000571790 MAGI1Q96QZ7 1491 aaPredicted RBP24.26■■□□□ 1.47
NUBP1-204ENST00000571790 CUX1P39880 1505 aa24.23■■□□□ 1.47
NUBP1-204ENST00000571790 GRIN2BQ13224 1484 aa24.22■■□□□ 1.47
NUBP1-204ENST00000571790 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
NUBP1-204ENST00000571790 AEBP2Q6ZN18 517 aaPredicted RBP24.12■■□□□ 1.45
NUBP1-204ENST00000571790 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
NUBP1-204ENST00000571790 PBRM1Q86U86 1689 aa24.08■■□□□ 1.45
NUBP1-204ENST00000571790 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
NUBP1-204ENST00000571790 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
NUBP1-204ENST00000571790 ERCC6L2Q5T890 1561 aa23.94■■□□□ 1.42
NUBP1-204ENST00000571790 GRIN2AQ12879 1464 aa23.92■■□□□ 1.42
NUBP1-204ENST00000571790 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
NUBP1-204ENST00000571790 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
NUBP1-204ENST00000571790 NUP160Q12769 1436 aa23.84■■□□□ 1.41
NUBP1-204ENST00000571790 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
NUBP1-204ENST00000571790 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
NUBP1-204ENST00000571790 SHROOM2Q13796 1616 aa23.75■■□□□ 1.39
NUBP1-204ENST00000571790 SUPT5HO00267 1087 aaKnown RBP23.73■■□□□ 1.39
NUBP1-204ENST00000571790 TOP2BQ02880 1626 aa23.7■■□□□ 1.39
NUBP1-204ENST00000571790 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.38
NUBP1-204ENST00000571790 ERICH3Q5RHP9 1530 aa23.68■■□□□ 1.38
NUBP1-204ENST00000571790 PRG4Q92954 1404 aaPredicted RBP23.67■■□□□ 1.38
NUBP1-204ENST00000571790 KIF13AQ9H1H9 1805 aa23.64■■□□□ 1.38
NUBP1-204ENST00000571790 JPH4Q96JJ6 628 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms