RNA–Protein interactions for RNA: ENST00000571776.1

RFWD3-203, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 2

Gene RFWD3, Length 936 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-203ENST00000571776 NISCHQ9Y2I1 1504 aa46.09■■■■■ 4.97
RFWD3-203ENST00000571776 CCDC180Q9P1Z9 1646 aa41.32■■■■■ 4.2
RFWD3-203ENST00000571776 ABCC9O60706 1549 aa41.23■■■■■ 4.19
RFWD3-203ENST00000571776 RB1CC1Q8TDY2 1594 aa39.3■■■■□ 3.88
RFWD3-203ENST00000571776 NACADO15069 1562 aa39.04■■■■□ 3.84
RFWD3-203ENST00000571776 DCAF8L2P0C7V8 631 aa38.9■■■■□ 3.82
RFWD3-203ENST00000571776 MYO15BQ96JP2 1530 aa38.53■■■■□ 3.76
RFWD3-203ENST00000571776 DNAJC5BQ9UF47 199 aa38.53■■■■□ 3.76
RFWD3-203ENST00000571776 PABPN1Q86U42 306 aaKnown RBP eCLIP38.4■■■■□ 3.74
RFWD3-203ENST00000571776 UNC13AQ9UPW8 1703 aa38.35■■■■□ 3.73
RFWD3-203ENST00000571776 ZCCHC6Q5VYS8 1495 aaKnown RBP38.22■■■■□ 3.71
RFWD3-203ENST00000571776 BICRAQ9NZM4 1560 aa38.1■■■■□ 3.69
RFWD3-203ENST00000571776 DCAF1Q9Y4B6 1507 aa38.07■■■■□ 3.69
RFWD3-203ENST00000571776 SCRIBQ14160 1630 aa37.67■■■■□ 3.62
RFWD3-203ENST00000571776 SHROOM4Q9ULL8 1493 aa37.65■■■■□ 3.62
RFWD3-203ENST00000571776 CC2D2AQ9P2K1 1620 aa37.24■■■■□ 3.55
RFWD3-203ENST00000571776 EIF4G1Q04637 1599 aaKnown RBP37.19■■■■□ 3.54
RFWD3-203ENST00000571776 CECR2Q9BXF3 1484 aa37.13■■■■□ 3.54
RFWD3-203ENST00000571776 NCAPD3P42695 1498 aa36.04■■■■□ 3.36
RFWD3-203ENST00000571776 ATAD2BQ9ULI0 1458 aa35.94■■■■□ 3.34
RFWD3-203ENST00000571776 SMARCA4P51532 1647 aa35.94■■■■□ 3.34
RFWD3-203ENST00000571776 SMARCA2P51531 1590 aa35.87■■■■□ 3.33
RFWD3-203ENST00000571776 BAZ1AQ9NRL2 1556 aaPredicted RBP35.79■■■■□ 3.32
RFWD3-203ENST00000571776 HMGXB3Q12766 1538 aa35.78■■■■□ 3.32
RFWD3-203ENST00000571776 BAZ1BQ9UIG0 1483 aaKnown RBP35.63■■■■□ 3.29
RFWD3-203ENST00000571776 ERCC6Q03468 1493 aa35.62■■■■□ 3.29
RFWD3-203ENST00000571776 PEG3Q9GZU2 1588 aa35.58■■■■□ 3.29
RFWD3-203ENST00000571776 MROH2BQ7Z745 1585 aa35.51■■■■□ 3.27
RFWD3-203ENST00000571776 CUX2O14529 1486 aa35.49■■■■□ 3.27
RFWD3-203ENST00000571776 NESP48681 1621 aa35.42■■■■□ 3.26
RFWD3-203ENST00000571776 DNAJC5Q9H3Z4 198 aa35.33■■■■□ 3.25
RFWD3-203ENST00000571776 LAMC3Q9Y6N6 1575 aa35.22■■■■□ 3.23
RFWD3-203ENST00000571776 WIZO95785 1651 aa35.08■■■■□ 3.21
RFWD3-203ENST00000571776 THOC2Q8NI27 1593 aaKnown RBP35.04■■■■□ 3.2
RFWD3-203ENST00000571776 PDS5BQ9NTI5 1447 aa35.03■■■■□ 3.2
RFWD3-203ENST00000571776 KIF21AQ7Z4S6 1674 aa34.98■■■■□ 3.19
RFWD3-203ENST00000571776 CADPSQ9ULU8 1353 aa34.96■■■■□ 3.19
RFWD3-203ENST00000571776 RSF1Q96T23 1441 aaPredicted RBP34.81■■■■□ 3.16
RFWD3-203ENST00000571776 MRC2Q9UBG0 1479 aa34.71■■■■□ 3.15
RFWD3-203ENST00000571776 TOP2AP11388 1531 aaKnown RBP34.67■■■■□ 3.14
RFWD3-203ENST00000571776 WDR62O43379 1518 aa34.61■■■■□ 3.13
RFWD3-203ENST00000571776 CEP164Q9UPV0 1460 aa34.6■■■■□ 3.13
RFWD3-203ENST00000571776 CFTRP13569 1480 aa34.57■■■■□ 3.12
RFWD3-203ENST00000571776 FANCD2Q9BXW9 1451 aa34.57■■■■□ 3.12
RFWD3-203ENST00000571776 CCDC88BA6NC98 1476 aa34.27■■■■□ 3.08
RFWD3-203ENST00000571776 URB2Q14146 1524 aaKnown RBP34.25■■■■□ 3.07
RFWD3-203ENST00000571776 PRDM2Q13029 1718 aa34.22■■■■□ 3.07
RFWD3-203ENST00000571776 TOPBP1Q92547 1522 aa33.91■■■■□ 3.02
RFWD3-203ENST00000571776 IFT140Q96RY7 1462 aa33.91■■■■□ 3.02
RFWD3-203ENST00000571776 OSCARQ8IYS5 282 aa33.9■■■■□ 3.02
RFWD3-203ENST00000571776 ABCC8Q09428 1581 aa33.88■■■■□ 3.01
RFWD3-203ENST00000571776 TRIM41Q8WV44 630 aa33.87■■■■□ 3.01
RFWD3-203ENST00000571776 ZNF608Q9ULD9 1512 aaPredicted RBP33.81■■■■□ 3
RFWD3-203ENST00000571776 DNMBPQ6XZF7 1577 aa33.81■■■■□ 3
RFWD3-203ENST00000571776 EIF4G3O43432 1585 aaKnown RBP33.64■■■□□ 2.98
RFWD3-203ENST00000571776 TARBP1Q13395 1621 aaKnown RBP33.59■■■□□ 2.97
RFWD3-203ENST00000571776 POLA1P09884 1462 aaPredicted RBP33.57■■■□□ 2.97
RFWD3-203ENST00000571776 AQRO60306 1485 aaKnown RBP eCLIP33.53■■■□□ 2.963e-8■■■■■ 31.9
RFWD3-203ENST00000571776 RAD54L2Q9Y4B4 1467 aa33.44■■■□□ 2.94
RFWD3-203ENST00000571776 SOGA1O94964 1423 aa33.44■■■□□ 2.94
RFWD3-203ENST00000571776 RIMBP3CA6NJZ7 1639 aa33.42■■■□□ 2.94
RFWD3-203ENST00000571776 RIMBP3BA6NNM3 1639 aa33.42■■■□□ 2.94
RFWD3-203ENST00000571776 RIMBP3Q9UFD9 1639 aa33.42■■■□□ 2.94
RFWD3-203ENST00000571776 SUPT5HO00267 1087 aaKnown RBP33.39■■■□□ 2.94
RFWD3-203ENST00000571776 FGD5Q6ZNL6 1462 aa33.38■■■□□ 2.93
RFWD3-203ENST00000571776 CUX1P39880 1505 aa33.36■■■□□ 2.93
RFWD3-203ENST00000571776 CHD1O14646 1710 aa33.36■■■□□ 2.93
RFWD3-203ENST00000571776 TDRD9Q8NDG6 1382 aaKnown RBP33.34■■■□□ 2.93
RFWD3-203ENST00000571776 ARHGEF11O15085 1522 aa33.33■■■□□ 2.93
RFWD3-203ENST00000571776 FBLN2P98095 1184 aa33.33■■■□□ 2.93
RFWD3-203ENST00000571776 WDR97A6NE52 1622 aa33.29■■■□□ 2.92
RFWD3-203ENST00000571776 SNAPC4Q5SXM2 1469 aa33.2■■■□□ 2.91
RFWD3-203ENST00000571776 GRIN2BQ13224 1484 aa33.14■■■□□ 2.9
RFWD3-203ENST00000571776 MAGI1Q96QZ7 1491 aaPredicted RBP33.13■■■□□ 2.89
RFWD3-203ENST00000571776 CYB5RLQ6IPT4 315 aa33.1■■■□□ 2.89
RFWD3-203ENST00000571776 CHMP7Q8WUX9 453 aaPredicted RBP33.1■■■□□ 2.89
RFWD3-203ENST00000571776 GAPVD1Q14C86 1478 aa33.04■■■□□ 2.88
RFWD3-203ENST00000571776 SYNJ1O43426 1573 aa33.01■■■□□ 2.88
RFWD3-203ENST00000571776 SYNJ2O15056 1496 aa33.01■■■□□ 2.88
RFWD3-203ENST00000571776 ABCA10Q8WWZ4 1543 aa33.01■■■□□ 2.87
RFWD3-203ENST00000571776 ARAP1Q96P48 1450 aa33■■■□□ 2.87
RFWD3-203ENST00000571776 PBRM1Q86U86 1689 aa33■■■□□ 2.87
RFWD3-203ENST00000571776 CLASP1Q7Z460 1538 aa32.98■■■□□ 2.87
RFWD3-203ENST00000571776 ABCA5Q8WWZ7 1642 aa32.95■■■□□ 2.86
RFWD3-203ENST00000571776 WRNQ14191 1432 aaPredicted RBP eCLIP32.92■■■□□ 2.86
RFWD3-203ENST00000571776 TOP2BQ02880 1626 aa32.86■■■□□ 2.85
RFWD3-203ENST00000571776 BIVM-ERCC5R4GMW8 1640 aa32.86■■■□□ 2.85
RFWD3-203ENST00000571776 TRHP20396 242 aaPredicted RBP32.73■■■□□ 2.83
RFWD3-203ENST00000571776 GRIN2AQ12879 1464 aa32.71■■■□□ 2.83
RFWD3-203ENST00000571776 ADAMTS12P58397 1594 aa32.7■■■□□ 2.82
RFWD3-203ENST00000571776 FHAD1B1AJZ9 1412 aa32.62■■■□□ 2.81
RFWD3-203ENST00000571776 ERICH3Q5RHP9 1530 aa32.61■■■□□ 2.81
RFWD3-203ENST00000571776 NUP160Q12769 1436 aa32.58■■■□□ 2.81
RFWD3-203ENST00000571776 CEP170Q5SW79 1584 aa32.57■■■□□ 2.8
RFWD3-203ENST00000571776 ERCC6L2Q5T890 1561 aa32.47■■■□□ 2.79
RFWD3-203ENST00000571776 SHROOM2Q13796 1616 aa32.42■■■□□ 2.78
RFWD3-203ENST00000571776 PRG4Q92954 1404 aaPredicted RBP32.27■■■□□ 2.76
RFWD3-203ENST00000571776 JPH4Q96JJ6 628 aa32.26■■■□□ 2.75
RFWD3-203ENST00000571776 KIF27Q86VH2 1401 aa32.26■■■□□ 2.75
RFWD3-203ENST00000571776 RUSC2Q8N2Y8 1516 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms