RNA–Protein interactions for RNA: ENST00000571668.5

SPNS2-205, Transcript of sphingolipid transporter 2, humanhuman

TSL 2

Gene SPNS2, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-205ENST00000571668 NISCHQ9Y2I1 1504 aa33.19■■■□□ 2.9
SPNS2-205ENST00000571668 CCDC180Q9P1Z9 1646 aa29.78■■■□□ 2.36
SPNS2-205ENST00000571668 ABCC9O60706 1549 aa29.37■■■□□ 2.29
SPNS2-205ENST00000571668 RB1CC1Q8TDY2 1594 aa28.23■■■□□ 2.11
SPNS2-205ENST00000571668 NACADO15069 1562 aa28.12■■■□□ 2.09
SPNS2-205ENST00000571668 MYO15BQ96JP2 1530 aa27.89■■■□□ 2.06
SPNS2-205ENST00000571668 DCAF8L2P0C7V8 631 aa27.77■■■□□ 2.04
SPNS2-205ENST00000571668 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
SPNS2-205ENST00000571668 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
SPNS2-205ENST00000571668 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
SPNS2-205ENST00000571668 PABPN1Q86U42 306 aaKnown RBP eCLIP27.33■■□□□ 1.97
SPNS2-205ENST00000571668 DNAJC5BQ9UF47 199 aa27.3■■□□□ 1.96
SPNS2-205ENST00000571668 BICRAQ9NZM4 1560 aa27.28■■□□□ 1.96
SPNS2-205ENST00000571668 SHROOM4Q9ULL8 1493 aa27.2■■□□□ 1.95
SPNS2-205ENST00000571668 SCRIBQ14160 1630 aa26.95■■□□□ 1.91
SPNS2-205ENST00000571668 EIF4G1Q04637 1599 aaKnown RBP26.64■■□□□ 1.86
SPNS2-205ENST00000571668 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
SPNS2-205ENST00000571668 CECR2Q9BXF3 1484 aa26.52■■□□□ 1.84
SPNS2-205ENST00000571668 NCAPD3P42695 1498 aa25.93■■□□□ 1.74
SPNS2-205ENST00000571668 SMARCA2P51531 1590 aa25.84■■□□□ 1.73
SPNS2-205ENST00000571668 SMARCA4P51532 1647 aa25.83■■□□□ 1.73
SPNS2-205ENST00000571668 ATAD2BQ9ULI0 1458 aa25.81■■□□□ 1.72
SPNS2-205ENST00000571668 BAZ1AQ9NRL2 1556 aaPredicted RBP25.8■■□□□ 1.72
SPNS2-205ENST00000571668 HMGXB3Q12766 1538 aa25.77■■□□□ 1.72
SPNS2-205ENST00000571668 PEG3Q9GZU2 1588 aa25.68■■□□□ 1.7
SPNS2-205ENST00000571668 BAZ1BQ9UIG0 1483 aaKnown RBP25.59■■□□□ 1.69
SPNS2-205ENST00000571668 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
SPNS2-205ENST00000571668 ERCC6Q03468 1493 aa25.44■■□□□ 1.66
SPNS2-205ENST00000571668 CUX2O14529 1486 aa25.42■■□□□ 1.66
SPNS2-205ENST00000571668 LAMC3Q9Y6N6 1575 aa25.32■■□□□ 1.64
SPNS2-205ENST00000571668 NESP48681 1621 aa25.26■■□□□ 1.63
SPNS2-205ENST00000571668 WIZO95785 1651 aa25.17■■□□□ 1.62
SPNS2-205ENST00000571668 PDS5BQ9NTI5 1447 aa25.17■■□□□ 1.62
SPNS2-205ENST00000571668 CADPSQ9ULU8 1353 aa25.12■■□□□ 1.61
SPNS2-205ENST00000571668 DNAJC5Q9H3Z4 198 aa25.1■■□□□ 1.61
SPNS2-205ENST00000571668 RSF1Q96T23 1441 aaPredicted RBP25.08■■□□□ 1.61
SPNS2-205ENST00000571668 THOC2Q8NI27 1593 aaKnown RBP25.07■■□□□ 1.6
SPNS2-205ENST00000571668 KIF21AQ7Z4S6 1674 aa25.01■■□□□ 1.59
SPNS2-205ENST00000571668 TOP2AP11388 1531 aaKnown RBP24.98■■□□□ 1.59
SPNS2-205ENST00000571668 CFTRP13569 1480 aa24.89■■□□□ 1.57
SPNS2-205ENST00000571668 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.57
SPNS2-205ENST00000571668 CEP164Q9UPV0 1460 aa24.83■■□□□ 1.56
SPNS2-205ENST00000571668 WDR62O43379 1518 aa24.82■■□□□ 1.56
SPNS2-205ENST00000571668 FANCD2Q9BXW9 1451 aa24.79■■□□□ 1.56
SPNS2-205ENST00000571668 PRDM2Q13029 1718 aa24.68■■□□□ 1.54
SPNS2-205ENST00000571668 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.53
SPNS2-205ENST00000571668 URB2Q14146 1524 aaKnown RBP24.53■■□□□ 1.52
SPNS2-205ENST00000571668 ABCC8Q09428 1581 aa24.47■■□□□ 1.51
SPNS2-205ENST00000571668 IFT140Q96RY7 1462 aa24.36■■□□□ 1.49
SPNS2-205ENST00000571668 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
SPNS2-205ENST00000571668 DNMBPQ6XZF7 1577 aa24.31■■□□□ 1.48
SPNS2-205ENST00000571668 OSCARQ8IYS5 282 aa24.25■■□□□ 1.47
SPNS2-205ENST00000571668 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
SPNS2-205ENST00000571668 TARBP1Q13395 1621 aaKnown RBP24.11■■□□□ 1.45
SPNS2-205ENST00000571668 POLA1P09884 1462 aaPredicted RBP24.1■■□□□ 1.45
SPNS2-205ENST00000571668 EIF4G3O43432 1585 aaKnown RBP24.09■■□□□ 1.45
SPNS2-205ENST00000571668 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
SPNS2-205ENST00000571668 SOGA1O94964 1423 aa24.01■■□□□ 1.43
SPNS2-205ENST00000571668 SUPT5HO00267 1087 aaKnown RBP24■■□□□ 1.43
SPNS2-205ENST00000571668 AQRO60306 1485 aaKnown RBP eCLIP23.97■■□□□ 1.43
SPNS2-205ENST00000571668 FGD5Q6ZNL6 1462 aa23.96■■□□□ 1.43
SPNS2-205ENST00000571668 CUX1P39880 1505 aa23.95■■□□□ 1.43
SPNS2-205ENST00000571668 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
SPNS2-205ENST00000571668 RAD54L2Q9Y4B4 1467 aa23.93■■□□□ 1.42
SPNS2-205ENST00000571668 TDRD9Q8NDG6 1382 aaKnown RBP23.86■■□□□ 1.41
SPNS2-205ENST00000571668 CHD1O14646 1710 aa23.85■■□□□ 1.41
SPNS2-205ENST00000571668 MAGI1Q96QZ7 1491 aaPredicted RBP23.83■■□□□ 1.41
SPNS2-205ENST00000571668 RIMBP3CA6NJZ7 1639 aa23.83■■□□□ 1.41
SPNS2-205ENST00000571668 RIMBP3BA6NNM3 1639 aa23.83■■□□□ 1.41
SPNS2-205ENST00000571668 RIMBP3Q9UFD9 1639 aa23.83■■□□□ 1.41
SPNS2-205ENST00000571668 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
SPNS2-205ENST00000571668 ARHGEF11O15085 1522 aa23.8■■□□□ 1.4
SPNS2-205ENST00000571668 ABCA10Q8WWZ4 1543 aa23.78■■□□□ 1.4
SPNS2-205ENST00000571668 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
SPNS2-205ENST00000571668 FBLN2P98095 1184 aa23.76■■□□□ 1.39
SPNS2-205ENST00000571668 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
SPNS2-205ENST00000571668 WRNQ14191 1432 aaPredicted RBP eCLIP23.73■■□□□ 1.39
SPNS2-205ENST00000571668 CHMP7Q8WUX9 453 aaPredicted RBP23.72■■□□□ 1.39
SPNS2-205ENST00000571668 SYNJ2O15056 1496 aa23.72■■□□□ 1.39
SPNS2-205ENST00000571668 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.39
SPNS2-205ENST00000571668 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
SPNS2-205ENST00000571668 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
SPNS2-205ENST00000571668 PBRM1Q86U86 1689 aa23.68■■□□□ 1.38
SPNS2-205ENST00000571668 ABCA5Q8WWZ7 1642 aa23.68■■□□□ 1.38
SPNS2-205ENST00000571668 CLASP1Q7Z460 1538 aa23.64■■□□□ 1.37
SPNS2-205ENST00000571668 CYB5RLQ6IPT4 315 aa23.56■■□□□ 1.36
SPNS2-205ENST00000571668 ARAP1Q96P48 1450 aa23.55■■□□□ 1.36
SPNS2-205ENST00000571668 ERICH3Q5RHP9 1530 aa23.52■■□□□ 1.36
SPNS2-205ENST00000571668 GRIN2AQ12879 1464 aa23.49■■□□□ 1.35
SPNS2-205ENST00000571668 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
SPNS2-205ENST00000571668 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
SPNS2-205ENST00000571668 NUP160Q12769 1436 aa23.42■■□□□ 1.34
SPNS2-205ENST00000571668 CEP170Q5SW79 1584 aa23.32■■□□□ 1.32
SPNS2-205ENST00000571668 SHROOM2Q13796 1616 aa23.29■■□□□ 1.32
SPNS2-205ENST00000571668 KIF27Q86VH2 1401 aa23.27■■□□□ 1.32
SPNS2-205ENST00000571668 TRHP20396 242 aaPredicted RBP23.24■■□□□ 1.31
SPNS2-205ENST00000571668 CUL7Q14999 1698 aa23.21■■□□□ 1.31
SPNS2-205ENST00000571668 IGF1RP08069 1367 aa23.18■■□□□ 1.3
SPNS2-205ENST00000571668 JPH4Q96JJ6 628 aa23.16■■□□□ 1.3
SPNS2-205ENST00000571668 ERCC6L2Q5T890 1561 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms