RNA–Protein interactions for RNA: ENST00000571597.1

FXR2-203, Transcript of FMR1 autosomal homolog 2, humanhuman

TSL 4

Gene FXR2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-203ENST00000571597 NISCHQ9Y2I1 1504 aa52.14■■■■■ 5.94
FXR2-203ENST00000571597 CCDC180Q9P1Z9 1646 aa46.77■■■■■ 5.08
FXR2-203ENST00000571597 ABCC9O60706 1549 aa46.23■■■■■ 4.99
FXR2-203ENST00000571597 RB1CC1Q8TDY2 1594 aa44.28■■■■■ 4.68
FXR2-203ENST00000571597 NACADO15069 1562 aa44.05■■■■■ 4.64
FXR2-203ENST00000571597 DCAF8L2P0C7V8 631 aa43.62■■■■■ 4.57
FXR2-203ENST00000571597 MYO15BQ96JP2 1530 aa43.61■■■■■ 4.57
FXR2-203ENST00000571597 ZCCHC6Q5VYS8 1495 aaKnown RBP43.34■■■■■ 4.53
FXR2-203ENST00000571597 UNC13AQ9UPW8 1703 aa43.3■■■■■ 4.52
FXR2-203ENST00000571597 DCAF1Q9Y4B6 1507 aa43.17■■■■■ 4.5
FXR2-203ENST00000571597 PABPN1Q86U42 306 aaKnown RBP eCLIP42.98■■■■■ 4.47
FXR2-203ENST00000571597 BICRAQ9NZM4 1560 aa42.93■■■■■ 4.46
FXR2-203ENST00000571597 DNAJC5BQ9UF47 199 aa42.89■■■■■ 4.46
FXR2-203ENST00000571597 SCRIBQ14160 1630 aa42.54■■■■■ 4.4
FXR2-203ENST00000571597 SHROOM4Q9ULL8 1493 aa42.54■■■■■ 4.4
FXR2-203ENST00000571597 EIF4G1Q04637 1599 aaKnown RBP41.87■■■■■ 4.29
FXR2-203ENST00000571597 CC2D2AQ9P2K1 1620 aa41.84■■■■■ 4.29
FXR2-203ENST00000571597 CECR2Q9BXF3 1484 aa41.65■■■■■ 4.26
FXR2-203ENST00000571597 SMARCA4P51532 1647 aa40.64■■■■■ 4.1
FXR2-203ENST00000571597 NCAPD3P42695 1498 aa40.6■■■■■ 4.09
FXR2-203ENST00000571597 ATAD2BQ9ULI0 1458 aa40.52■■■■■ 4.08
FXR2-203ENST00000571597 SMARCA2P51531 1590 aa40.52■■■■■ 4.08
FXR2-203ENST00000571597 BAZ1AQ9NRL2 1556 aaPredicted RBP40.5■■■■■ 4.07
FXR2-203ENST00000571597 HMGXB3Q12766 1538 aa40.44■■■■■ 4.06
FXR2-203ENST00000571597 PEG3Q9GZU2 1588 aa40.27■■■■■ 4.04
FXR2-203ENST00000571597 BAZ1BQ9UIG0 1483 aaKnown RBP40.19■■■■■ 4.03
FXR2-203ENST00000571597 MROH2BQ7Z745 1585 aa40.14■■■■■ 4.02
FXR2-203ENST00000571597 ERCC6Q03468 1493 aa39.95■■■■□ 3.99
FXR2-203ENST00000571597 CUX2O14529 1486 aa39.81■■■■□ 3.96
FXR2-203ENST00000571597 NESP48681 1621 aa39.8■■■■□ 3.96
FXR2-203ENST00000571597 LAMC3Q9Y6N6 1575 aa39.71■■■■□ 3.95
FXR2-203ENST00000571597 WIZO95785 1651 aa39.7■■■■□ 3.95
FXR2-203ENST00000571597 THOC2Q8NI27 1593 aaKnown RBP39.47■■■■□ 3.91
FXR2-203ENST00000571597 KIF21AQ7Z4S6 1674 aa39.42■■■■□ 3.9
FXR2-203ENST00000571597 RSF1Q96T23 1441 aaPredicted RBP39.42■■■■□ 3.9
FXR2-203ENST00000571597 PDS5BQ9NTI5 1447 aa39.4■■■■□ 3.9
FXR2-203ENST00000571597 CADPSQ9ULU8 1353 aa39.35■■■■□ 3.89
FXR2-203ENST00000571597 TOP2AP11388 1531 aaKnown RBP39.29■■■■□ 3.88
FXR2-203ENST00000571597 DNAJC5Q9H3Z4 198 aa39.19■■■■□ 3.86
FXR2-203ENST00000571597 MRC2Q9UBG0 1479 aa39.08■■■■□ 3.85
FXR2-203ENST00000571597 CFTRP13569 1480 aa39.03■■■■□ 3.84
FXR2-203ENST00000571597 CEP164Q9UPV0 1460 aa39■■■■□ 3.83
FXR2-203ENST00000571597 WDR62O43379 1518 aa38.99■■■■□ 3.83
FXR2-203ENST00000571597 FANCD2Q9BXW9 1451 aa38.95■■■■□ 3.83
FXR2-203ENST00000571597 PRDM2Q13029 1718 aa38.83■■■■□ 3.81
FXR2-203ENST00000571597 CCDC88BA6NC98 1476 aa38.73■■■■□ 3.79
FXR2-203ENST00000571597 URB2Q14146 1524 aaKnown RBP38.6■■■■□ 3.77
FXR2-203ENST00000571597 TOPBP1Q92547 1522 aa38.26■■■■□ 3.72
FXR2-203ENST00000571597 ABCC8Q09428 1581 aa38.23■■■■□ 3.71
FXR2-203ENST00000571597 DNMBPQ6XZF7 1577 aa38.21■■■■□ 3.71
FXR2-203ENST00000571597 IFT140Q96RY7 1462 aa38.2■■■■□ 3.71
FXR2-203ENST00000571597 ZNF608Q9ULD9 1512 aaPredicted RBP38.03■■■■□ 3.68
FXR2-203ENST00000571597 EIF4G3O43432 1585 aaKnown RBP37.96■■■■□ 3.67
FXR2-203ENST00000571597 TARBP1Q13395 1621 aaKnown RBP37.92■■■■□ 3.66
FXR2-203ENST00000571597 POLA1P09884 1462 aaPredicted RBP37.9■■■■□ 3.66
FXR2-203ENST00000571597 OSCARQ8IYS5 282 aa37.88■■■■□ 3.65
FXR2-203ENST00000571597 SUPT5HO00267 1087 aaKnown RBP37.8■■■■□ 3.64
FXR2-203ENST00000571597 CUX1P39880 1505 aa37.72■■■■□ 3.63
FXR2-203ENST00000571597 FGD5Q6ZNL6 1462 aa37.71■■■■□ 3.63
FXR2-203ENST00000571597 AQRO60306 1485 aaKnown RBP eCLIP37.7■■■■□ 3.631e-8■■■■■ 34.1
FXR2-203ENST00000571597 RAD54L2Q9Y4B4 1467 aa37.67■■■■□ 3.62
FXR2-203ENST00000571597 WDR97A6NE52 1622 aa37.67■■■■□ 3.62
FXR2-203ENST00000571597 SOGA1O94964 1423 aa37.65■■■■□ 3.62
FXR2-203ENST00000571597 TRIM41Q8WV44 630 aa37.61■■■■□ 3.61
FXR2-203ENST00000571597 CHD1O14646 1710 aa37.6■■■■□ 3.61
FXR2-203ENST00000571597 TDRD9Q8NDG6 1382 aaKnown RBP37.51■■■■□ 3.59
FXR2-203ENST00000571597 RIMBP3CA6NJZ7 1639 aa37.49■■■■□ 3.59
FXR2-203ENST00000571597 RIMBP3BA6NNM3 1639 aa37.49■■■■□ 3.59
FXR2-203ENST00000571597 RIMBP3Q9UFD9 1639 aa37.49■■■■□ 3.59
FXR2-203ENST00000571597 SNAPC4Q5SXM2 1469 aa37.41■■■■□ 3.58
FXR2-203ENST00000571597 ARHGEF11O15085 1522 aa37.4■■■■□ 3.58
FXR2-203ENST00000571597 MAGI1Q96QZ7 1491 aaPredicted RBP37.38■■■■□ 3.57
FXR2-203ENST00000571597 GRIN2BQ13224 1484 aa37.37■■■■□ 3.57
FXR2-203ENST00000571597 ABCA10Q8WWZ4 1543 aa37.32■■■■□ 3.57
FXR2-203ENST00000571597 PBRM1Q86U86 1689 aa37.32■■■■□ 3.57
FXR2-203ENST00000571597 FBLN2P98095 1184 aa37.32■■■■□ 3.56
FXR2-203ENST00000571597 BIVM-ERCC5R4GMW8 1640 aa37.29■■■■□ 3.56
FXR2-203ENST00000571597 ABCA5Q8WWZ7 1642 aa37.28■■■■□ 3.56
FXR2-203ENST00000571597 TOP2BQ02880 1626 aa37.27■■■■□ 3.56
FXR2-203ENST00000571597 GAPVD1Q14C86 1478 aa37.26■■■■□ 3.55
FXR2-203ENST00000571597 WRNQ14191 1432 aaPredicted RBP eCLIP37.22■■■■□ 3.55
FXR2-203ENST00000571597 SYNJ2O15056 1496 aa37.21■■■■□ 3.55
FXR2-203ENST00000571597 SYNJ1O43426 1573 aa37.21■■■■□ 3.55
FXR2-203ENST00000571597 CLASP1Q7Z460 1538 aa37.16■■■■□ 3.54
FXR2-203ENST00000571597 CHMP7Q8WUX9 453 aaPredicted RBP37.14■■■■□ 3.54
FXR2-203ENST00000571597 ARAP1Q96P48 1450 aa37.05■■■■□ 3.52
FXR2-203ENST00000571597 ADAMTS12P58397 1594 aa36.99■■■■□ 3.51
FXR2-203ENST00000571597 CYB5RLQ6IPT4 315 aa36.93■■■■□ 3.5
FXR2-203ENST00000571597 GRIN2AQ12879 1464 aa36.89■■■■□ 3.5
FXR2-203ENST00000571597 ERICH3Q5RHP9 1530 aa36.89■■■■□ 3.5
FXR2-203ENST00000571597 FHAD1B1AJZ9 1412 aa36.81■■■■□ 3.48
FXR2-203ENST00000571597 NUP160Q12769 1436 aa36.76■■■■□ 3.47
FXR2-203ENST00000571597 CEP170Q5SW79 1584 aa36.75■■■■□ 3.47
FXR2-203ENST00000571597 SHROOM2Q13796 1616 aa36.6■■■■□ 3.45
FXR2-203ENST00000571597 ERCC6L2Q5T890 1561 aa36.53■■■■□ 3.44
FXR2-203ENST00000571597 KIF27Q86VH2 1401 aa36.49■■■■□ 3.43
FXR2-203ENST00000571597 CUL7Q14999 1698 aa36.47■■■■□ 3.43
FXR2-203ENST00000571597 RUSC2Q8N2Y8 1516 aa36.46■■■■□ 3.43
FXR2-203ENST00000571597 TRHP20396 242 aaPredicted RBP36.42■■■■□ 3.42
FXR2-203ENST00000571597 IGF1RP08069 1367 aa36.35■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 227.5 ms