RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 NISCHQ9Y2I1 1504 aa33.8■■■■□ 3
PRPF8-202ENST00000571346 CCDC180Q9P1Z9 1646 aa30.28■■■□□ 2.44
PRPF8-202ENST00000571346 ABCC9O60706 1549 aa29.99■■■□□ 2.39
PRPF8-202ENST00000571346 RB1CC1Q8TDY2 1594 aa28.67■■■□□ 2.18
PRPF8-202ENST00000571346 NACADO15069 1562 aa28.5■■■□□ 2.15
PRPF8-202ENST00000571346 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
PRPF8-202ENST00000571346 MYO15BQ96JP2 1530 aa28.15■■■□□ 2.1
PRPF8-202ENST00000571346 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
PRPF8-202ENST00000571346 UNC13AQ9UPW8 1703 aa28.06■■■□□ 2.08
PRPF8-202ENST00000571346 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
PRPF8-202ENST00000571346 PABPN1Q86U42 306 aaKnown RBP eCLIP27.91■■■□□ 2.06
PRPF8-202ENST00000571346 BICRAQ9NZM4 1560 aa27.79■■■□□ 2.04
PRPF8-202ENST00000571346 DNAJC5BQ9UF47 199 aa27.74■■■□□ 2.03
PRPF8-202ENST00000571346 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
PRPF8-202ENST00000571346 SHROOM4Q9ULL8 1493 aa27.46■■□□□ 1.99
PRPF8-202ENST00000571346 EIF4G1Q04637 1599 aaKnown RBP27.13■■□□□ 1.93
PRPF8-202ENST00000571346 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
PRPF8-202ENST00000571346 CECR2Q9BXF3 1484 aa26.98■■□□□ 1.91
PRPF8-202ENST00000571346 SMARCA4P51532 1647 aa26.37■■□□□ 1.81
PRPF8-202ENST00000571346 BAZ1AQ9NRL2 1556 aaPredicted RBP26.26■■□□□ 1.79
PRPF8-202ENST00000571346 ATAD2BQ9ULI0 1458 aa26.26■■□□□ 1.79
PRPF8-202ENST00000571346 NCAPD3P42695 1498 aa26.25■■□□□ 1.79
PRPF8-202ENST00000571346 SMARCA2P51531 1590 aa26.24■■□□□ 1.79
PRPF8-202ENST00000571346 HMGXB3Q12766 1538 aa26.18■■□□□ 1.78
PRPF8-202ENST00000571346 BAZ1BQ9UIG0 1483 aaKnown RBP26.08■■□□□ 1.77
PRPF8-202ENST00000571346 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
PRPF8-202ENST00000571346 PEG3Q9GZU2 1588 aa26.05■■□□□ 1.76
PRPF8-202ENST00000571346 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
PRPF8-202ENST00000571346 NESP48681 1621 aa25.83■■□□□ 1.73
PRPF8-202ENST00000571346 WIZO95785 1651 aa25.8■■□□□ 1.72
PRPF8-202ENST00000571346 CUX2O14529 1486 aa25.72■■□□□ 1.71
PRPF8-202ENST00000571346 LAMC3Q9Y6N6 1575 aa25.7■■□□□ 1.71
PRPF8-202ENST00000571346 RSF1Q96T23 1441 aaPredicted RBP25.59■■□□□ 1.69
PRPF8-202ENST00000571346 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.68
PRPF8-202ENST00000571346 THOC2Q8NI27 1593 aaKnown RBP25.56■■□□□ 1.68
PRPF8-202ENST00000571346 PDS5BQ9NTI5 1447 aa25.51■■□□□ 1.67
PRPF8-202ENST00000571346 TOP2AP11388 1531 aaKnown RBP25.49■■□□□ 1.67
PRPF8-202ENST00000571346 CADPSQ9ULU8 1353 aa25.48■■□□□ 1.67
PRPF8-202ENST00000571346 MRC2Q9UBG0 1479 aa25.32■■□□□ 1.64
PRPF8-202ENST00000571346 CEP164Q9UPV0 1460 aa25.29■■□□□ 1.64
PRPF8-202ENST00000571346 CFTRP13569 1480 aa25.28■■□□□ 1.64
PRPF8-202ENST00000571346 DNAJC5Q9H3Z4 198 aa25.26■■□□□ 1.63
PRPF8-202ENST00000571346 FANCD2Q9BXW9 1451 aa25.26■■□□□ 1.63
PRPF8-202ENST00000571346 WDR62O43379 1518 aa25.25■■□□□ 1.63
PRPF8-202ENST00000571346 PRDM2Q13029 1718 aa25.16■■□□□ 1.62
PRPF8-202ENST00000571346 CCDC88BA6NC98 1476 aa25.15■■□□□ 1.62
PRPF8-202ENST00000571346 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
PRPF8-202ENST00000571346 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
PRPF8-202ENST00000571346 DNMBPQ6XZF7 1577 aa24.77■■□□□ 1.56
PRPF8-202ENST00000571346 ABCC8Q09428 1581 aa24.73■■□□□ 1.55
PRPF8-202ENST00000571346 IFT140Q96RY7 1462 aa24.73■■□□□ 1.55
PRPF8-202ENST00000571346 SUPT5HO00267 1087 aaKnown RBP24.69■■□□□ 1.54
PRPF8-202ENST00000571346 ZNF608Q9ULD9 1512 aaPredicted RBP24.67■■□□□ 1.54
PRPF8-202ENST00000571346 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
PRPF8-202ENST00000571346 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.52
PRPF8-202ENST00000571346 TARBP1Q13395 1621 aaKnown RBP24.57■■□□□ 1.52
PRPF8-202ENST00000571346 OSCARQ8IYS5 282 aa24.5■■□□□ 1.51
PRPF8-202ENST00000571346 CUX1P39880 1505 aa24.5■■□□□ 1.51
PRPF8-202ENST00000571346 FGD5Q6ZNL6 1462 aa24.48■■□□□ 1.51
PRPF8-202ENST00000571346 RAD54L2Q9Y4B4 1467 aa24.47■■□□□ 1.51
PRPF8-202ENST00000571346 AQRO60306 1485 aaKnown RBP eCLIP24.46■■□□□ 1.516e-8■■■■■ 43.6
PRPF8-202ENST00000571346 SOGA1O94964 1423 aa24.42■■□□□ 1.5
PRPF8-202ENST00000571346 TRIM41Q8WV44 630 aa24.4■■□□□ 1.5
PRPF8-202ENST00000571346 CHD1O14646 1710 aa24.39■■□□□ 1.5
PRPF8-202ENST00000571346 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
PRPF8-202ENST00000571346 TDRD9Q8NDG6 1382 aaKnown RBP24.35■■□□□ 1.49
PRPF8-202ENST00000571346 SNAPC4Q5SXM2 1469 aa24.29■■□□□ 1.48
PRPF8-202ENST00000571346 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
PRPF8-202ENST00000571346 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
PRPF8-202ENST00000571346 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
PRPF8-202ENST00000571346 FBLN2P98095 1184 aa24.27■■□□□ 1.48
PRPF8-202ENST00000571346 PBRM1Q86U86 1689 aa24.23■■□□□ 1.47
PRPF8-202ENST00000571346 ARHGEF11O15085 1522 aa24.22■■□□□ 1.47
PRPF8-202ENST00000571346 GRIN2BQ13224 1484 aa24.21■■□□□ 1.47
PRPF8-202ENST00000571346 MAGI1Q96QZ7 1491 aaPredicted RBP24.2■■□□□ 1.47
PRPF8-202ENST00000571346 BIVM-ERCC5R4GMW8 1640 aa24.2■■□□□ 1.46
PRPF8-202ENST00000571346 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
PRPF8-202ENST00000571346 TOP2BQ02880 1626 aa24.18■■□□□ 1.46
PRPF8-202ENST00000571346 ABCA10Q8WWZ4 1543 aa24.18■■□□□ 1.46
PRPF8-202ENST00000571346 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.469e-6■■■■■ 50.1
PRPF8-202ENST00000571346 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
PRPF8-202ENST00000571346 GAPVD1Q14C86 1478 aa24.17■■□□□ 1.46
PRPF8-202ENST00000571346 SYNJ2O15056 1496 aa24.11■■□□□ 1.45
PRPF8-202ENST00000571346 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
PRPF8-202ENST00000571346 CLASP1Q7Z460 1538 aa24.06■■□□□ 1.44
PRPF8-202ENST00000571346 ADAMTS12P58397 1594 aa24■■□□□ 1.43
PRPF8-202ENST00000571346 ARAP1Q96P48 1450 aa24■■□□□ 1.43
PRPF8-202ENST00000571346 CYB5RLQ6IPT4 315 aa23.94■■□□□ 1.42
PRPF8-202ENST00000571346 GRIN2AQ12879 1464 aa23.92■■□□□ 1.42
PRPF8-202ENST00000571346 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.42
PRPF8-202ENST00000571346 FHAD1B1AJZ9 1412 aa23.85■■□□□ 1.41
PRPF8-202ENST00000571346 CEP170Q5SW79 1584 aa23.84■■□□□ 1.41
PRPF8-202ENST00000571346 NUP160Q12769 1436 aa23.8■■□□□ 1.4
PRPF8-202ENST00000571346 ERCC6L2Q5T890 1561 aa23.71■■□□□ 1.39
PRPF8-202ENST00000571346 SHROOM2Q13796 1616 aa23.7■■□□□ 1.38
PRPF8-202ENST00000571346 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
PRPF8-202ENST00000571346 RUSC2Q8N2Y8 1516 aa23.67■■□□□ 1.38
PRPF8-202ENST00000571346 CUL7Q14999 1698 aa23.67■■□□□ 1.38
PRPF8-202ENST00000571346 TRHP20396 242 aaPredicted RBP23.64■■□□□ 1.37
PRPF8-202ENST00000571346 IGF1RP08069 1367 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms