RNA–Protein interactions for RNA: ENST00000571341.1

STRA6-211, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 4

Gene STRA6, Length 449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-211ENST00000571341 NISCHQ9Y2I1 1504 aa34.04■■■■□ 3.04
STRA6-211ENST00000571341 CCDC180Q9P1Z9 1646 aa30.45■■■□□ 2.47
STRA6-211ENST00000571341 ABCC9O60706 1549 aa30.21■■■□□ 2.43
STRA6-211ENST00000571341 RB1CC1Q8TDY2 1594 aa28.78■■■□□ 2.2
STRA6-211ENST00000571341 NACADO15069 1562 aa28.65■■■□□ 2.18
STRA6-211ENST00000571341 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
STRA6-211ENST00000571341 MYO15BQ96JP2 1530 aa28.37■■■□□ 2.13
STRA6-211ENST00000571341 DCAF8L2P0C7V8 631 aa28.34■■■□□ 2.13
STRA6-211ENST00000571341 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
STRA6-211ENST00000571341 DNAJC5BQ9UF47 199 aa28.29■■■□□ 2.12
STRA6-211ENST00000571341 BICRAQ9NZM4 1560 aa28.2■■■□□ 2.1
STRA6-211ENST00000571341 DCAF1Q9Y4B6 1507 aa28.12■■■□□ 2.09
STRA6-211ENST00000571341 PABPN1Q86U42 306 aaKnown RBP eCLIP28.11■■■□□ 2.09
STRA6-211ENST00000571341 SCRIBQ14160 1630 aa27.78■■■□□ 2.04
STRA6-211ENST00000571341 SHROOM4Q9ULL8 1493 aa27.55■■■□□ 2
STRA6-211ENST00000571341 CC2D2AQ9P2K1 1620 aa27.35■■□□□ 1.97
STRA6-211ENST00000571341 EIF4G1Q04637 1599 aaKnown RBP27.34■■□□□ 1.97
STRA6-211ENST00000571341 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
STRA6-211ENST00000571341 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
STRA6-211ENST00000571341 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
STRA6-211ENST00000571341 ATAD2BQ9ULI0 1458 aa26.48■■□□□ 1.83
STRA6-211ENST00000571341 HMGXB3Q12766 1538 aa26.33■■□□□ 1.81
STRA6-211ENST00000571341 BAZ1AQ9NRL2 1556 aaPredicted RBP26.33■■□□□ 1.8
STRA6-211ENST00000571341 SMARCA2P51531 1590 aa26.31■■□□□ 1.8
STRA6-211ENST00000571341 MROH2BQ7Z745 1585 aa26.31■■□□□ 1.8
STRA6-211ENST00000571341 PEG3Q9GZU2 1588 aa26.3■■□□□ 1.8
STRA6-211ENST00000571341 BAZ1BQ9UIG0 1483 aaKnown RBP26.13■■□□□ 1.77
STRA6-211ENST00000571341 NESP48681 1621 aa26.11■■□□□ 1.77
STRA6-211ENST00000571341 WIZO95785 1651 aa26.02■■□□□ 1.76
STRA6-211ENST00000571341 ERCC6Q03468 1493 aa25.88■■□□□ 1.73
STRA6-211ENST00000571341 CUX2O14529 1486 aa25.86■■□□□ 1.73
STRA6-211ENST00000571341 THOC2Q8NI27 1593 aaKnown RBP25.83■■□□□ 1.73
STRA6-211ENST00000571341 LAMC3Q9Y6N6 1575 aa25.83■■□□□ 1.73
STRA6-211ENST00000571341 KIF21AQ7Z4S6 1674 aa25.8■■□□□ 1.72
STRA6-211ENST00000571341 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
STRA6-211ENST00000571341 CADPSQ9ULU8 1353 aa25.64■■□□□ 1.69
STRA6-211ENST00000571341 TOP2AP11388 1531 aaKnown RBP25.61■■□□□ 1.69
STRA6-211ENST00000571341 DNAJC5Q9H3Z4 198 aa25.6■■□□□ 1.69
STRA6-211ENST00000571341 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
STRA6-211ENST00000571341 CFTRP13569 1480 aa25.47■■□□□ 1.67
STRA6-211ENST00000571341 WDR62O43379 1518 aa25.44■■□□□ 1.66
STRA6-211ENST00000571341 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
STRA6-211ENST00000571341 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
STRA6-211ENST00000571341 CCDC88BA6NC98 1476 aa25.34■■□□□ 1.65
STRA6-211ENST00000571341 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
STRA6-211ENST00000571341 PRDM2Q13029 1718 aa25.3■■□□□ 1.64
STRA6-211ENST00000571341 URB2Q14146 1524 aaKnown RBP25.27■■□□□ 1.64
STRA6-211ENST00000571341 TOPBP1Q92547 1522 aa24.97■■□□□ 1.59
STRA6-211ENST00000571341 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
STRA6-211ENST00000571341 DNMBPQ6XZF7 1577 aa24.88■■□□□ 1.57
STRA6-211ENST00000571341 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.56
STRA6-211ENST00000571341 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
STRA6-211ENST00000571341 EIF4G3O43432 1585 aaKnown RBP24.77■■□□□ 1.56
STRA6-211ENST00000571341 POLA1P09884 1462 aaPredicted RBP24.74■■□□□ 1.55
STRA6-211ENST00000571341 ABCC8Q09428 1581 aa24.74■■□□□ 1.55
STRA6-211ENST00000571341 CUX1P39880 1505 aa24.69■■□□□ 1.54
STRA6-211ENST00000571341 RAD54L2Q9Y4B4 1467 aa24.66■■□□□ 1.54
STRA6-211ENST00000571341 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.54
STRA6-211ENST00000571341 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
STRA6-211ENST00000571341 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
STRA6-211ENST00000571341 OSCARQ8IYS5 282 aa24.59■■□□□ 1.53
STRA6-211ENST00000571341 CHD1O14646 1710 aa24.58■■□□□ 1.52
STRA6-211ENST00000571341 WDR97A6NE52 1622 aa24.57■■□□□ 1.52
STRA6-211ENST00000571341 SOGA1O94964 1423 aa24.52■■□□□ 1.52
STRA6-211ENST00000571341 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
STRA6-211ENST00000571341 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
STRA6-211ENST00000571341 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
STRA6-211ENST00000571341 TDRD9Q8NDG6 1382 aaKnown RBP24.49■■□□□ 1.51
STRA6-211ENST00000571341 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
STRA6-211ENST00000571341 ARHGEF11O15085 1522 aa24.4■■□□□ 1.5
STRA6-211ENST00000571341 SNAPC4Q5SXM2 1469 aa24.39■■□□□ 1.5
STRA6-211ENST00000571341 SYNJ1O43426 1573 aa24.36■■□□□ 1.49
STRA6-211ENST00000571341 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
STRA6-211ENST00000571341 PBRM1Q86U86 1689 aa24.35■■□□□ 1.49
STRA6-211ENST00000571341 BIVM-ERCC5R4GMW8 1640 aa24.35■■□□□ 1.49
STRA6-211ENST00000571341 ABCA10Q8WWZ4 1543 aa24.33■■□□□ 1.49
STRA6-211ENST00000571341 CLASP1Q7Z460 1538 aa24.3■■□□□ 1.48
STRA6-211ENST00000571341 TOP2BQ02880 1626 aa24.3■■□□□ 1.48
STRA6-211ENST00000571341 GRIN2BQ13224 1484 aa24.28■■□□□ 1.48
STRA6-211ENST00000571341 MAGI1Q96QZ7 1491 aaPredicted RBP24.26■■□□□ 1.47
STRA6-211ENST00000571341 GAPVD1Q14C86 1478 aa24.25■■□□□ 1.47
STRA6-211ENST00000571341 ARAP1Q96P48 1450 aa24.24■■□□□ 1.47
STRA6-211ENST00000571341 WRNQ14191 1432 aaPredicted RBP eCLIP24.21■■□□□ 1.47
STRA6-211ENST00000571341 SYNJ2O15056 1496 aa24.2■■□□□ 1.47
STRA6-211ENST00000571341 FBLN2P98095 1184 aa24.2■■□□□ 1.46
STRA6-211ENST00000571341 ADAMTS12P58397 1594 aa24.12■■□□□ 1.45
STRA6-211ENST00000571341 CHMP7Q8WUX9 453 aaPredicted RBP24.07■■□□□ 1.44
STRA6-211ENST00000571341 CEP170Q5SW79 1584 aa24.05■■□□□ 1.44
STRA6-211ENST00000571341 CYB5RLQ6IPT4 315 aa24.05■■□□□ 1.44
STRA6-211ENST00000571341 GRIN2AQ12879 1464 aa24.03■■□□□ 1.44
STRA6-211ENST00000571341 ERCC6L2Q5T890 1561 aa24.03■■□□□ 1.44
STRA6-211ENST00000571341 NUP160Q12769 1436 aa23.99■■□□□ 1.43
STRA6-211ENST00000571341 ERICH3Q5RHP9 1530 aa23.99■■□□□ 1.43
STRA6-211ENST00000571341 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
STRA6-211ENST00000571341 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
STRA6-211ENST00000571341 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
STRA6-211ENST00000571341 IGF1RP08069 1367 aa23.76■■□□□ 1.39
STRA6-211ENST00000571341 CUL7Q14999 1698 aa23.68■■□□□ 1.38
STRA6-211ENST00000571341 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
STRA6-211ENST00000571341 PRG4Q92954 1404 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms