RNA–Protein interactions for RNA: ENST00000571306.1

ABR-211, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-211ENST00000571306 NISCHQ9Y2I1 1504 aa34.53■■■■□ 3.12
ABR-211ENST00000571306 ABCC9O60706 1549 aa31.07■■■□□ 2.56
ABR-211ENST00000571306 CCDC180Q9P1Z9 1646 aa30.94■■■□□ 2.54
ABR-211ENST00000571306 RB1CC1Q8TDY2 1594 aa29.5■■■□□ 2.31
ABR-211ENST00000571306 DNAJC5BQ9UF47 199 aa29.38■■■□□ 2.29
ABR-211ENST00000571306 NACADO15069 1562 aa29.3■■■□□ 2.28
ABR-211ENST00000571306 DCAF8L2P0C7V8 631 aa29.15■■■□□ 2.26
ABR-211ENST00000571306 PABPN1Q86U42 306 aaKnown RBP eCLIP28.97■■■□□ 2.23
ABR-211ENST00000571306 MYO15BQ96JP2 1530 aa28.92■■■□□ 2.22
ABR-211ENST00000571306 UNC13AQ9UPW8 1703 aa28.89■■■□□ 2.21
ABR-211ENST00000571306 BICRAQ9NZM4 1560 aa28.74■■■□□ 2.19
ABR-211ENST00000571306 ZCCHC6Q5VYS8 1495 aaKnown RBP28.58■■■□□ 2.17
ABR-211ENST00000571306 DCAF1Q9Y4B6 1507 aa28.51■■■□□ 2.15
ABR-211ENST00000571306 SHROOM4Q9ULL8 1493 aa28.25■■■□□ 2.11
ABR-211ENST00000571306 SCRIBQ14160 1630 aa28.19■■■□□ 2.1
ABR-211ENST00000571306 CC2D2AQ9P2K1 1620 aa28.07■■■□□ 2.08
ABR-211ENST00000571306 CECR2Q9BXF3 1484 aa28■■■□□ 2.07
ABR-211ENST00000571306 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
ABR-211ENST00000571306 NCAPD3P42695 1498 aa27.12■■□□□ 1.93
ABR-211ENST00000571306 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
ABR-211ENST00000571306 DNAJC5Q9H3Z4 198 aa26.97■■□□□ 1.91
ABR-211ENST00000571306 SMARCA4P51532 1647 aa26.91■■□□□ 1.9
ABR-211ENST00000571306 SMARCA2P51531 1590 aa26.86■■□□□ 1.89
ABR-211ENST00000571306 HMGXB3Q12766 1538 aa26.84■■□□□ 1.89
ABR-211ENST00000571306 CUX2O14529 1486 aa26.79■■□□□ 1.88
ABR-211ENST00000571306 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
ABR-211ENST00000571306 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
ABR-211ENST00000571306 NESP48681 1621 aa26.71■■□□□ 1.87
ABR-211ENST00000571306 PEG3Q9GZU2 1588 aa26.69■■□□□ 1.86
ABR-211ENST00000571306 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
ABR-211ENST00000571306 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
ABR-211ENST00000571306 LAMC3Q9Y6N6 1575 aa26.45■■□□□ 1.82
ABR-211ENST00000571306 THOC2Q8NI27 1593 aaKnown RBP26.41■■□□□ 1.82
ABR-211ENST00000571306 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
ABR-211ENST00000571306 KIF21AQ7Z4S6 1674 aa26.3■■□□□ 1.8
ABR-211ENST00000571306 CADPSQ9ULU8 1353 aa26.28■■□□□ 1.8
ABR-211ENST00000571306 WIZO95785 1651 aa26.27■■□□□ 1.8
ABR-211ENST00000571306 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
ABR-211ENST00000571306 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
ABR-211ENST00000571306 WDR62O43379 1518 aa26.03■■□□□ 1.76
ABR-211ENST00000571306 CFTRP13569 1480 aa25.96■■□□□ 1.75
ABR-211ENST00000571306 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
ABR-211ENST00000571306 CEP164Q9UPV0 1460 aa25.94■■□□□ 1.74
ABR-211ENST00000571306 TOP2AP11388 1531 aaKnown RBP25.9■■□□□ 1.74
ABR-211ENST00000571306 URB2Q14146 1524 aaKnown RBP25.77■■□□□ 1.72
ABR-211ENST00000571306 TRIM41Q8WV44 630 aa25.67■■□□□ 1.7
ABR-211ENST00000571306 CCDC88BA6NC98 1476 aa25.66■■□□□ 1.7
ABR-211ENST00000571306 OSCARQ8IYS5 282 aa25.61■■□□□ 1.69
ABR-211ENST00000571306 PRDM2Q13029 1718 aa25.6■■□□□ 1.69
ABR-211ENST00000571306 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
ABR-211ENST00000571306 TOPBP1Q92547 1522 aa25.45■■□□□ 1.66
ABR-211ENST00000571306 IFT140Q96RY7 1462 aa25.45■■□□□ 1.66
ABR-211ENST00000571306 ABCC8Q09428 1581 aa25.36■■□□□ 1.65
ABR-211ENST00000571306 DNMBPQ6XZF7 1577 aa25.31■■□□□ 1.64
ABR-211ENST00000571306 EIF4G3O43432 1585 aaKnown RBP25.25■■□□□ 1.63
ABR-211ENST00000571306 RIMBP3CA6NJZ7 1639 aa25.24■■□□□ 1.63
ABR-211ENST00000571306 RIMBP3BA6NNM3 1639 aa25.24■■□□□ 1.63
ABR-211ENST00000571306 TARBP1Q13395 1621 aaKnown RBP25.24■■□□□ 1.63
ABR-211ENST00000571306 RIMBP3Q9UFD9 1639 aa25.24■■□□□ 1.63
ABR-211ENST00000571306 AQRO60306 1485 aaKnown RBP eCLIP25.23■■□□□ 1.63
ABR-211ENST00000571306 POLA1P09884 1462 aaPredicted RBP25.19■■□□□ 1.62
ABR-211ENST00000571306 ARHGEF11O15085 1522 aa25.16■■□□□ 1.62
ABR-211ENST00000571306 RAD54L2Q9Y4B4 1467 aa25.12■■□□□ 1.61
ABR-211ENST00000571306 CHD1O14646 1710 aa25.09■■□□□ 1.61
ABR-211ENST00000571306 SOGA1O94964 1423 aa25.08■■□□□ 1.61
ABR-211ENST00000571306 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
ABR-211ENST00000571306 FBLN2P98095 1184 aa25.02■■□□□ 1.6
ABR-211ENST00000571306 CYB5RLQ6IPT4 315 aa25.02■■□□□ 1.6
ABR-211ENST00000571306 FGD5Q6ZNL6 1462 aa25.01■■□□□ 1.59
ABR-211ENST00000571306 CUX1P39880 1505 aa25■■□□□ 1.59
ABR-211ENST00000571306 ARAP1Q96P48 1450 aa24.93■■□□□ 1.58
ABR-211ENST00000571306 SNAPC4Q5SXM2 1469 aa24.92■■□□□ 1.58
ABR-211ENST00000571306 WDR97A6NE52 1622 aa24.92■■□□□ 1.58
ABR-211ENST00000571306 GRIN2BQ13224 1484 aa24.84■■□□□ 1.57
ABR-211ENST00000571306 MAGI1Q96QZ7 1491 aaPredicted RBP24.84■■□□□ 1.57
ABR-211ENST00000571306 CHMP7Q8WUX9 453 aaPredicted RBP24.84■■□□□ 1.57
ABR-211ENST00000571306 CLASP1Q7Z460 1538 aa24.83■■□□□ 1.57
ABR-211ENST00000571306 SUPT5HO00267 1087 aaKnown RBP24.79■■□□□ 1.56
ABR-211ENST00000571306 SYNJ2O15056 1496 aa24.77■■□□□ 1.56
ABR-211ENST00000571306 GAPVD1Q14C86 1478 aa24.76■■□□□ 1.55
ABR-211ENST00000571306 SYNJ1O43426 1573 aa24.75■■□□□ 1.55
ABR-211ENST00000571306 ABCA10Q8WWZ4 1543 aa24.73■■□□□ 1.55
ABR-211ENST00000571306 TRHP20396 242 aaPredicted RBP24.71■■□□□ 1.55
ABR-211ENST00000571306 PBRM1Q86U86 1689 aa24.7■■□□□ 1.54
ABR-211ENST00000571306 ABCA5Q8WWZ7 1642 aa24.68■■□□□ 1.54
ABR-211ENST00000571306 WRNQ14191 1432 aaPredicted RBP eCLIP24.6■■□□□ 1.53
ABR-211ENST00000571306 TOP2BQ02880 1626 aa24.54■■□□□ 1.52
ABR-211ENST00000571306 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
ABR-211ENST00000571306 GRIN2AQ12879 1464 aa24.53■■□□□ 1.52
ABR-211ENST00000571306 ADAMTS12P58397 1594 aa24.48■■□□□ 1.51
ABR-211ENST00000571306 NUP160Q12769 1436 aa24.48■■□□□ 1.51
ABR-211ENST00000571306 ERCC6L2Q5T890 1561 aa24.47■■□□□ 1.51
ABR-211ENST00000571306 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
ABR-211ENST00000571306 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
ABR-211ENST00000571306 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
ABR-211ENST00000571306 SHROOM2Q13796 1616 aa24.36■■□□□ 1.49
ABR-211ENST00000571306 JPH4Q96JJ6 628 aa24.26■■□□□ 1.47
ABR-211ENST00000571306 PRG4Q92954 1404 aaPredicted RBP24.24■■□□□ 1.47
ABR-211ENST00000571306 IGF1RP08069 1367 aa24.16■■□□□ 1.46
ABR-211ENST00000571306 RUSC2Q8N2Y8 1516 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms