RNA–Protein interactions for RNA: ENST00000571175.5

NUBP1-203, Transcript of nucleotide binding protein 1, humanhuman

TSL 2

Gene NUBP1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1-203ENST00000571175 NISCHQ9Y2I1 1504 aa34.38■■■■□ 3.09
NUBP1-203ENST00000571175 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
NUBP1-203ENST00000571175 ABCC9O60706 1549 aa30.58■■■□□ 2.49
NUBP1-203ENST00000571175 RB1CC1Q8TDY2 1594 aa29.26■■■□□ 2.27
NUBP1-203ENST00000571175 NACADO15069 1562 aa29.11■■■□□ 2.25
NUBP1-203ENST00000571175 DCAF8L2P0C7V8 631 aa28.99■■■□□ 2.23
NUBP1-203ENST00000571175 MYO15BQ96JP2 1530 aa28.8■■■□□ 2.2
NUBP1-203ENST00000571175 PABPN1Q86U42 306 aaKnown RBP eCLIP28.52■■■□□ 2.16
NUBP1-203ENST00000571175 DNAJC5BQ9UF47 199 aa28.52■■■□□ 2.16
NUBP1-203ENST00000571175 ZCCHC6Q5VYS8 1495 aaKnown RBP28.52■■■□□ 2.16
NUBP1-203ENST00000571175 UNC13AQ9UPW8 1703 aa28.47■■■□□ 2.15
NUBP1-203ENST00000571175 DCAF1Q9Y4B6 1507 aa28.46■■■□□ 2.15
NUBP1-203ENST00000571175 BICRAQ9NZM4 1560 aa28.3■■■□□ 2.12
NUBP1-203ENST00000571175 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
NUBP1-203ENST00000571175 SCRIBQ14160 1630 aa28■■■□□ 2.07
NUBP1-203ENST00000571175 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
NUBP1-203ENST00000571175 CC2D2AQ9P2K1 1620 aa27.64■■■□□ 2.02
NUBP1-203ENST00000571175 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
NUBP1-203ENST00000571175 NCAPD3P42695 1498 aa26.87■■□□□ 1.89
NUBP1-203ENST00000571175 ATAD2BQ9ULI0 1458 aa26.78■■□□□ 1.88
NUBP1-203ENST00000571175 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
NUBP1-203ENST00000571175 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
NUBP1-203ENST00000571175 BAZ1AQ9NRL2 1556 aaPredicted RBP26.71■■□□□ 1.87
NUBP1-203ENST00000571175 HMGXB3Q12766 1538 aa26.66■■□□□ 1.86
NUBP1-203ENST00000571175 BAZ1BQ9UIG0 1483 aaKnown RBP26.54■■□□□ 1.84
NUBP1-203ENST00000571175 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
NUBP1-203ENST00000571175 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
NUBP1-203ENST00000571175 MROH2BQ7Z745 1585 aa26.45■■□□□ 1.82
NUBP1-203ENST00000571175 CUX2O14529 1486 aa26.38■■□□□ 1.81
NUBP1-203ENST00000571175 NESP48681 1621 aa26.28■■□□□ 1.8
NUBP1-203ENST00000571175 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
NUBP1-203ENST00000571175 DNAJC5Q9H3Z4 198 aa26.17■■□□□ 1.78
NUBP1-203ENST00000571175 PDS5BQ9NTI5 1447 aa26.12■■□□□ 1.77
NUBP1-203ENST00000571175 WIZO95785 1651 aa26.12■■□□□ 1.77
NUBP1-203ENST00000571175 CADPSQ9ULU8 1353 aa26.07■■□□□ 1.76
NUBP1-203ENST00000571175 THOC2Q8NI27 1593 aaKnown RBP26■■□□□ 1.75
NUBP1-203ENST00000571175 RSF1Q96T23 1441 aaPredicted RBP26■■□□□ 1.75
NUBP1-203ENST00000571175 KIF21AQ7Z4S6 1674 aa25.95■■□□□ 1.74
NUBP1-203ENST00000571175 TOP2AP11388 1531 aaKnown RBP25.86■■□□□ 1.73
NUBP1-203ENST00000571175 MRC2Q9UBG0 1479 aa25.83■■□□□ 1.73
NUBP1-203ENST00000571175 CFTRP13569 1480 aa25.79■■□□□ 1.72
NUBP1-203ENST00000571175 CEP164Q9UPV0 1460 aa25.77■■□□□ 1.72
NUBP1-203ENST00000571175 WDR62O43379 1518 aa25.74■■□□□ 1.71
NUBP1-203ENST00000571175 FANCD2Q9BXW9 1451 aa25.73■■□□□ 1.71
NUBP1-203ENST00000571175 CCDC88BA6NC98 1476 aa25.56■■□□□ 1.68
NUBP1-203ENST00000571175 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
NUBP1-203ENST00000571175 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
NUBP1-203ENST00000571175 ABCC8Q09428 1581 aa25.32■■□□□ 1.64
NUBP1-203ENST00000571175 IFT140Q96RY7 1462 aa25.27■■□□□ 1.64
NUBP1-203ENST00000571175 TOPBP1Q92547 1522 aa25.25■■□□□ 1.63
NUBP1-203ENST00000571175 OSCARQ8IYS5 282 aa25.24■■□□□ 1.63
NUBP1-203ENST00000571175 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
NUBP1-203ENST00000571175 ZNF608Q9ULD9 1512 aaPredicted RBP25.11■■□□□ 1.61
NUBP1-203ENST00000571175 SUPT5HO00267 1087 aaKnown RBP25.1■■□□□ 1.61
NUBP1-203ENST00000571175 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
NUBP1-203ENST00000571175 POLA1P09884 1462 aaPredicted RBP25■■□□□ 1.59
NUBP1-203ENST00000571175 EIF4G3O43432 1585 aaKnown RBP24.99■■□□□ 1.59
NUBP1-203ENST00000571175 TARBP1Q13395 1621 aaKnown RBP24.99■■□□□ 1.59
NUBP1-203ENST00000571175 AQRO60306 1485 aaKnown RBP eCLIP24.95■■□□□ 1.58
NUBP1-203ENST00000571175 SOGA1O94964 1423 aa24.94■■□□□ 1.58
NUBP1-203ENST00000571175 RAD54L2Q9Y4B4 1467 aa24.88■■□□□ 1.57
NUBP1-203ENST00000571175 FGD5Q6ZNL6 1462 aa24.86■■□□□ 1.57
NUBP1-203ENST00000571175 WDR97A6NE52 1622 aa24.85■■□□□ 1.57
NUBP1-203ENST00000571175 CUX1P39880 1505 aa24.84■■□□□ 1.57
NUBP1-203ENST00000571175 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
NUBP1-203ENST00000571175 FBLN2P98095 1184 aa24.8■■□□□ 1.56
NUBP1-203ENST00000571175 RIMBP3CA6NJZ7 1639 aa24.77■■□□□ 1.56
NUBP1-203ENST00000571175 RIMBP3BA6NNM3 1639 aa24.77■■□□□ 1.56
NUBP1-203ENST00000571175 RIMBP3Q9UFD9 1639 aa24.77■■□□□ 1.56
NUBP1-203ENST00000571175 CHD1O14646 1710 aa24.75■■□□□ 1.55
NUBP1-203ENST00000571175 ARHGEF11O15085 1522 aa24.73■■□□□ 1.55
NUBP1-203ENST00000571175 GRIN2BQ13224 1484 aa24.7■■□□□ 1.55
NUBP1-203ENST00000571175 SNAPC4Q5SXM2 1469 aa24.7■■□□□ 1.54
NUBP1-203ENST00000571175 MAGI1Q96QZ7 1491 aaPredicted RBP24.7■■□□□ 1.54
NUBP1-203ENST00000571175 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
NUBP1-203ENST00000571175 GAPVD1Q14C86 1478 aa24.63■■□□□ 1.53
NUBP1-203ENST00000571175 ABCA10Q8WWZ4 1543 aa24.62■■□□□ 1.53
NUBP1-203ENST00000571175 WRNQ14191 1432 aaPredicted RBP eCLIP24.6■■□□□ 1.53
NUBP1-203ENST00000571175 SYNJ2O15056 1496 aa24.59■■□□□ 1.53
NUBP1-203ENST00000571175 CYB5RLQ6IPT4 315 aa24.59■■□□□ 1.53
NUBP1-203ENST00000571175 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
NUBP1-203ENST00000571175 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
NUBP1-203ENST00000571175 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
NUBP1-203ENST00000571175 ABCA5Q8WWZ7 1642 aa24.53■■□□□ 1.52
NUBP1-203ENST00000571175 CLASP1Q7Z460 1538 aa24.51■■□□□ 1.51
NUBP1-203ENST00000571175 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
NUBP1-203ENST00000571175 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
NUBP1-203ENST00000571175 GRIN2AQ12879 1464 aa24.36■■□□□ 1.49
NUBP1-203ENST00000571175 ERICH3Q5RHP9 1530 aa24.34■■□□□ 1.49
NUBP1-203ENST00000571175 FHAD1B1AJZ9 1412 aa24.34■■□□□ 1.49
NUBP1-203ENST00000571175 ADAMTS12P58397 1594 aa24.33■■□□□ 1.48
NUBP1-203ENST00000571175 TRHP20396 242 aaPredicted RBP24.29■■□□□ 1.48
NUBP1-203ENST00000571175 NUP160Q12769 1436 aa24.27■■□□□ 1.48
NUBP1-203ENST00000571175 CEP170Q5SW79 1584 aa24.21■■□□□ 1.47
NUBP1-203ENST00000571175 KIF27Q86VH2 1401 aa24.12■■□□□ 1.45
NUBP1-203ENST00000571175 SHROOM2Q13796 1616 aa24.12■■□□□ 1.45
NUBP1-203ENST00000571175 ERCC6L2Q5T890 1561 aa24.08■■□□□ 1.44
NUBP1-203ENST00000571175 JPH4Q96JJ6 628 aa24.07■■□□□ 1.44
NUBP1-203ENST00000571175 IGF1RP08069 1367 aa24.05■■□□□ 1.44
NUBP1-203ENST00000571175 PRG4Q92954 1404 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms