RNA–Protein interactions for RNA: ENST00000571127.1

YBX2-204, Transcript of Y-box binding protein 2, humanhuman

TSL 2

Gene YBX2, Length 791 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX2-204ENST00000571127 NISCHQ9Y2I1 1504 aa50.7■■■■■ 5.71
YBX2-204ENST00000571127 CCDC180Q9P1Z9 1646 aa45.46■■■■■ 4.87
YBX2-204ENST00000571127 ABCC9O60706 1549 aa45.26■■■■■ 4.84
YBX2-204ENST00000571127 RB1CC1Q8TDY2 1594 aa43.2■■■■■ 4.51
YBX2-204ENST00000571127 NACADO15069 1562 aa42.95■■■■■ 4.47
YBX2-204ENST00000571127 DCAF8L2P0C7V8 631 aa42.73■■■■■ 4.43
YBX2-204ENST00000571127 MYO15BQ96JP2 1530 aa42.42■■■■■ 4.38
YBX2-204ENST00000571127 DNAJC5BQ9UF47 199 aa42.27■■■■■ 4.36
YBX2-204ENST00000571127 UNC13AQ9UPW8 1703 aa42.16■■■■■ 4.34
YBX2-204ENST00000571127 PABPN1Q86U42 306 aaKnown RBP eCLIP42.15■■■■■ 4.34
YBX2-204ENST00000571127 ZCCHC6Q5VYS8 1495 aaKnown RBP42.05■■■■■ 4.32
YBX2-204ENST00000571127 DCAF1Q9Y4B6 1507 aa41.92■■■■■ 4.3
YBX2-204ENST00000571127 BICRAQ9NZM4 1560 aa41.88■■■■■ 4.29
YBX2-204ENST00000571127 SHROOM4Q9ULL8 1493 aa41.43■■■■■ 4.22
YBX2-204ENST00000571127 SCRIBQ14160 1630 aa41.39■■■■■ 4.22
YBX2-204ENST00000571127 CC2D2AQ9P2K1 1620 aa40.91■■■■■ 4.14
YBX2-204ENST00000571127 EIF4G1Q04637 1599 aaKnown RBP40.86■■■■■ 4.13
YBX2-204ENST00000571127 CECR2Q9BXF3 1484 aa40.78■■■■■ 4.12
YBX2-204ENST00000571127 NCAPD3P42695 1498 aa39.62■■■■□ 3.93
YBX2-204ENST00000571127 ATAD2BQ9ULI0 1458 aa39.52■■■■□ 3.92
YBX2-204ENST00000571127 SMARCA4P51532 1647 aa39.51■■■■□ 3.92
YBX2-204ENST00000571127 SMARCA2P51531 1590 aa39.46■■■■□ 3.91
YBX2-204ENST00000571127 BAZ1AQ9NRL2 1556 aaPredicted RBP39.38■■■■□ 3.89
YBX2-204ENST00000571127 HMGXB3Q12766 1538 aa39.36■■■■□ 3.89
YBX2-204ENST00000571127 BAZ1BQ9UIG0 1483 aaKnown RBP39.17■■■■□ 3.86
YBX2-204ENST00000571127 PEG3Q9GZU2 1588 aa39.15■■■■□ 3.86
YBX2-204ENST00000571127 ERCC6Q03468 1493 aa39.12■■■■□ 3.85
YBX2-204ENST00000571127 MROH2BQ7Z745 1585 aa39.04■■■■□ 3.84
YBX2-204ENST00000571127 CUX2O14529 1486 aa39.01■■■■□ 3.84
YBX2-204ENST00000571127 NESP48681 1621 aa38.9■■■■□ 3.82
YBX2-204ENST00000571127 DNAJC5Q9H3Z4 198 aa38.78■■■■□ 3.8
YBX2-204ENST00000571127 LAMC3Q9Y6N6 1575 aa38.73■■■■□ 3.79
YBX2-204ENST00000571127 WIZO95785 1651 aa38.58■■■■□ 3.77
YBX2-204ENST00000571127 PDS5BQ9NTI5 1447 aa38.52■■■■□ 3.76
YBX2-204ENST00000571127 THOC2Q8NI27 1593 aaKnown RBP38.51■■■■□ 3.76
YBX2-204ENST00000571127 CADPSQ9ULU8 1353 aa38.44■■■■□ 3.74
YBX2-204ENST00000571127 KIF21AQ7Z4S6 1674 aa38.43■■■■□ 3.74
YBX2-204ENST00000571127 RSF1Q96T23 1441 aaPredicted RBP38.29■■■■□ 3.72
YBX2-204ENST00000571127 MRC2Q9UBG0 1479 aa38.15■■■■□ 3.7
YBX2-204ENST00000571127 TOP2AP11388 1531 aaKnown RBP38.14■■■■□ 3.7
YBX2-204ENST00000571127 WDR62O43379 1518 aa38.04■■■■□ 3.68
YBX2-204ENST00000571127 CEP164Q9UPV0 1460 aa38.03■■■■□ 3.68
YBX2-204ENST00000571127 CFTRP13569 1480 aa38.03■■■■□ 3.68
YBX2-204ENST00000571127 FANCD2Q9BXW9 1451 aa37.99■■■■□ 3.67
YBX2-204ENST00000571127 CCDC88BA6NC98 1476 aa37.69■■■■□ 3.62
YBX2-204ENST00000571127 PRDM2Q13029 1718 aa37.67■■■■□ 3.62
YBX2-204ENST00000571127 URB2Q14146 1524 aaKnown RBP37.64■■■■□ 3.62
YBX2-204ENST00000571127 TOPBP1Q92547 1522 aa37.29■■■■□ 3.56
YBX2-204ENST00000571127 IFT140Q96RY7 1462 aa37.27■■■■□ 3.56
YBX2-204ENST00000571127 ABCC8Q09428 1581 aa37.27■■■■□ 3.56
YBX2-204ENST00000571127 OSCARQ8IYS5 282 aa37.25■■■■□ 3.55
YBX2-204ENST00000571127 DNMBPQ6XZF7 1577 aa37.18■■■■□ 3.54
YBX2-204ENST00000571127 ZNF608Q9ULD9 1512 aaPredicted RBP37.15■■■■□ 3.54
YBX2-204ENST00000571127 TRIM41Q8WV44 630 aa37.14■■■■□ 3.54
YBX2-204ENST00000571127 EIF4G3O43432 1585 aaKnown RBP36.97■■■■□ 3.51
YBX2-204ENST00000571127 TARBP1Q13395 1621 aaKnown RBP36.92■■■■□ 3.5
YBX2-204ENST00000571127 POLA1P09884 1462 aaPredicted RBP36.91■■■■□ 3.5
YBX2-204ENST00000571127 AQRO60306 1485 aaKnown RBP eCLIP36.84■■■■□ 3.49
YBX2-204ENST00000571127 SOGA1O94964 1423 aa36.76■■■■□ 3.47
YBX2-204ENST00000571127 RAD54L2Q9Y4B4 1467 aa36.75■■■■□ 3.47
YBX2-204ENST00000571127 SUPT5HO00267 1087 aaKnown RBP36.72■■■■□ 3.47
YBX2-204ENST00000571127 RIMBP3CA6NJZ7 1639 aa36.7■■■■□ 3.47
YBX2-204ENST00000571127 RIMBP3BA6NNM3 1639 aa36.7■■■■□ 3.47
YBX2-204ENST00000571127 RIMBP3Q9UFD9 1639 aa36.7■■■■□ 3.47
YBX2-204ENST00000571127 FGD5Q6ZNL6 1462 aa36.7■■■■□ 3.47
YBX2-204ENST00000571127 CUX1P39880 1505 aa36.68■■■■□ 3.46
YBX2-204ENST00000571127 CHD1O14646 1710 aa36.66■■■■□ 3.46
YBX2-204ENST00000571127 TDRD9Q8NDG6 1382 aaKnown RBP36.64■■■■□ 3.46
YBX2-204ENST00000571127 WDR97A6NE52 1622 aa36.63■■■■□ 3.45
YBX2-204ENST00000571127 ARHGEF11O15085 1522 aa36.62■■■■□ 3.45
YBX2-204ENST00000571127 FBLN2P98095 1184 aa36.6■■■■□ 3.45
YBX2-204ENST00000571127 SNAPC4Q5SXM2 1469 aa36.49■■■■□ 3.43
YBX2-204ENST00000571127 GRIN2BQ13224 1484 aa36.43■■■■□ 3.42
YBX2-204ENST00000571127 MAGI1Q96QZ7 1491 aaPredicted RBP36.43■■■■□ 3.42
YBX2-204ENST00000571127 CHMP7Q8WUX9 453 aaPredicted RBP36.37■■■■□ 3.41
YBX2-204ENST00000571127 CYB5RLQ6IPT4 315 aa36.34■■■■□ 3.41
YBX2-204ENST00000571127 GAPVD1Q14C86 1478 aa36.32■■■■□ 3.41
YBX2-204ENST00000571127 ABCA10Q8WWZ4 1543 aa36.31■■■■□ 3.4
YBX2-204ENST00000571127 SYNJ2O15056 1496 aa36.3■■■■□ 3.4
YBX2-204ENST00000571127 SYNJ1O43426 1573 aa36.29■■■■□ 3.4
YBX2-204ENST00000571127 PBRM1Q86U86 1689 aa36.28■■■■□ 3.4
YBX2-204ENST00000571127 ARAP1Q96P48 1450 aa36.25■■■■□ 3.39
YBX2-204ENST00000571127 CLASP1Q7Z460 1538 aa36.25■■■■□ 3.39
YBX2-204ENST00000571127 ABCA5Q8WWZ7 1642 aa36.23■■■■□ 3.39
YBX2-204ENST00000571127 WRNQ14191 1432 aaPredicted RBP eCLIP36.21■■■■□ 3.39
YBX2-204ENST00000571127 TOP2BQ02880 1626 aa36.16■■■■□ 3.38
YBX2-204ENST00000571127 BIVM-ERCC5R4GMW8 1640 aa36.16■■■■□ 3.38
YBX2-204ENST00000571127 ADAMTS12P58397 1594 aa35.95■■■■□ 3.35
YBX2-204ENST00000571127 GRIN2AQ12879 1464 aa35.95■■■■□ 3.35
YBX2-204ENST00000571127 TRHP20396 242 aaPredicted RBP35.91■■■■□ 3.34
YBX2-204ENST00000571127 FHAD1B1AJZ9 1412 aa35.88■■■■□ 3.33
YBX2-204ENST00000571127 ERICH3Q5RHP9 1530 aa35.88■■■■□ 3.33
YBX2-204ENST00000571127 NUP160Q12769 1436 aa35.83■■■■□ 3.33
YBX2-204ENST00000571127 CEP170Q5SW79 1584 aa35.79■■■■□ 3.32
YBX2-204ENST00000571127 ERCC6L2Q5T890 1561 aa35.66■■■■□ 3.3
YBX2-204ENST00000571127 SHROOM2Q13796 1616 aa35.65■■■■□ 3.3
YBX2-204ENST00000571127 KIF27Q86VH2 1401 aa35.49■■■■□ 3.27
YBX2-204ENST00000571127 PRG4Q92954 1404 aaPredicted RBP35.48■■■■□ 3.27
YBX2-204ENST00000571127 JPH4Q96JJ6 628 aa35.47■■■■□ 3.27
YBX2-204ENST00000571127 RUSC2Q8N2Y8 1516 aa35.43■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms