RNA–Protein interactions for RNA: ENST00000570899.1

PHF23-204, Transcript of PHD finger protein 23, humanhuman

TSL 3

Gene PHF23, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF23-204ENST00000570899 NISCHQ9Y2I1 1504 aa38.79■■■■□ 3.8
PHF23-204ENST00000570899 ABCC9O60706 1549 aa35.04■■■■□ 3.2
PHF23-204ENST00000570899 CCDC180Q9P1Z9 1646 aa34.88■■■■□ 3.17
PHF23-204ENST00000570899 RB1CC1Q8TDY2 1594 aa33.3■■■□□ 2.92
PHF23-204ENST00000570899 NACADO15069 1562 aa33.03■■■□□ 2.88
PHF23-204ENST00000570899 DNAJC5BQ9UF47 199 aa32.97■■■□□ 2.87
PHF23-204ENST00000570899 DCAF8L2P0C7V8 631 aa32.9■■■□□ 2.86
PHF23-204ENST00000570899 PABPN1Q86U42 306 aaKnown RBP eCLIP32.62■■■□□ 2.81
PHF23-204ENST00000570899 MYO15BQ96JP2 1530 aa32.51■■■□□ 2.79
PHF23-204ENST00000570899 UNC13AQ9UPW8 1703 aa32.49■■■□□ 2.79
PHF23-204ENST00000570899 BICRAQ9NZM4 1560 aa32.27■■■□□ 2.76
PHF23-204ENST00000570899 ZCCHC6Q5VYS8 1495 aaKnown RBP32.1■■■□□ 2.73
PHF23-204ENST00000570899 DCAF1Q9Y4B6 1507 aa32.03■■■□□ 2.72
PHF23-204ENST00000570899 SHROOM4Q9ULL8 1493 aa31.89■■■□□ 2.7
PHF23-204ENST00000570899 SCRIBQ14160 1630 aa31.78■■■□□ 2.68
PHF23-204ENST00000570899 CC2D2AQ9P2K1 1620 aa31.64■■■□□ 2.65
PHF23-204ENST00000570899 CECR2Q9BXF3 1484 aa31.59■■■□□ 2.65
PHF23-204ENST00000570899 EIF4G1Q04637 1599 aaKnown RBP31.53■■■□□ 2.64
PHF23-204ENST00000570899 NCAPD3P42695 1498 aa30.48■■■□□ 2.47
PHF23-204ENST00000570899 DNAJC5Q9H3Z4 198 aa30.44■■■□□ 2.46
PHF23-204ENST00000570899 ATAD2BQ9ULI0 1458 aa30.36■■■□□ 2.45
PHF23-204ENST00000570899 ERCC6Q03468 1493 aa30.31■■■□□ 2.44
PHF23-204ENST00000570899 SMARCA2P51531 1590 aa30.3■■■□□ 2.44
PHF23-204ENST00000570899 CUX2O14529 1486 aa30.29■■■□□ 2.44
PHF23-204ENST00000570899 SMARCA4P51532 1647 aa30.29■■■□□ 2.44
PHF23-204ENST00000570899 HMGXB3Q12766 1538 aa30.24■■■□□ 2.43
PHF23-204ENST00000570899 BAZ1AQ9NRL2 1556 aaPredicted RBP30.14■■■□□ 2.42
PHF23-204ENST00000570899 BAZ1BQ9UIG0 1483 aaKnown RBP30.09■■■□□ 2.41
PHF23-204ENST00000570899 NESP48681 1621 aa30.03■■■□□ 2.4
PHF23-204ENST00000570899 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
PHF23-204ENST00000570899 MROH2BQ7Z745 1585 aa29.87■■■□□ 2.37
PHF23-204ENST00000570899 LAMC3Q9Y6N6 1575 aa29.83■■■□□ 2.37
PHF23-204ENST00000570899 THOC2Q8NI27 1593 aaKnown RBP29.75■■■□□ 2.35
PHF23-204ENST00000570899 PDS5BQ9NTI5 1447 aa29.7■■■□□ 2.34
PHF23-204ENST00000570899 KIF21AQ7Z4S6 1674 aa29.64■■■□□ 2.34
PHF23-204ENST00000570899 CADPSQ9ULU8 1353 aa29.56■■■□□ 2.32
PHF23-204ENST00000570899 WIZO95785 1651 aa29.5■■■□□ 2.31
PHF23-204ENST00000570899 MRC2Q9UBG0 1479 aa29.42■■■□□ 2.3
PHF23-204ENST00000570899 WDR62O43379 1518 aa29.33■■■□□ 2.29
PHF23-204ENST00000570899 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
PHF23-204ENST00000570899 FANCD2Q9BXW9 1451 aa29.23■■■□□ 2.27
PHF23-204ENST00000570899 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.27
PHF23-204ENST00000570899 CFTRP13569 1480 aa29.17■■■□□ 2.26
PHF23-204ENST00000570899 TOP2AP11388 1531 aaKnown RBP29.15■■■□□ 2.26
PHF23-204ENST00000570899 TRIM41Q8WV44 630 aa29.08■■■□□ 2.25
PHF23-204ENST00000570899 URB2Q14146 1524 aaKnown RBP28.97■■■□□ 2.23
PHF23-204ENST00000570899 OSCARQ8IYS5 282 aa28.91■■■□□ 2.22
PHF23-204ENST00000570899 PRDM2Q13029 1718 aa28.87■■■□□ 2.21
PHF23-204ENST00000570899 CCDC88BA6NC98 1476 aa28.81■■■□□ 2.2
PHF23-204ENST00000570899 IFT140Q96RY7 1462 aa28.71■■■□□ 2.19
PHF23-204ENST00000570899 TOPBP1Q92547 1522 aa28.64■■■□□ 2.18
PHF23-204ENST00000570899 ZNF608Q9ULD9 1512 aaPredicted RBP28.64■■■□□ 2.17
PHF23-204ENST00000570899 ABCC8Q09428 1581 aa28.62■■■□□ 2.17
PHF23-204ENST00000570899 DNMBPQ6XZF7 1577 aa28.54■■■□□ 2.16
PHF23-204ENST00000570899 RIMBP3CA6NJZ7 1639 aa28.49■■■□□ 2.15
PHF23-204ENST00000570899 RIMBP3BA6NNM3 1639 aa28.49■■■□□ 2.15
PHF23-204ENST00000570899 RIMBP3Q9UFD9 1639 aa28.49■■■□□ 2.15
PHF23-204ENST00000570899 EIF4G3O43432 1585 aaKnown RBP28.47■■■□□ 2.15
PHF23-204ENST00000570899 ARHGEF11O15085 1522 aa28.39■■■□□ 2.14
PHF23-204ENST00000570899 TARBP1Q13395 1621 aaKnown RBP28.38■■■□□ 2.13
PHF23-204ENST00000570899 AQRO60306 1485 aaKnown RBP eCLIP28.38■■■□□ 2.135e-8■■■■■ 26.8
PHF23-204ENST00000570899 POLA1P09884 1462 aaPredicted RBP28.34■■■□□ 2.13
PHF23-204ENST00000570899 CHD1O14646 1710 aa28.3■■■□□ 2.12
PHF23-204ENST00000570899 FBLN2P98095 1184 aa28.29■■■□□ 2.12
PHF23-204ENST00000570899 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
PHF23-204ENST00000570899 SOGA1O94964 1423 aa28.24■■■□□ 2.11
PHF23-204ENST00000570899 RAD54L2Q9Y4B4 1467 aa28.23■■■□□ 2.11
PHF23-204ENST00000570899 TDRD9Q8NDG6 1382 aaKnown RBP28.19■■■□□ 2.1
PHF23-204ENST00000570899 FGD5Q6ZNL6 1462 aa28.15■■■□□ 2.1
PHF23-204ENST00000570899 WDR97A6NE52 1622 aa28.12■■■□□ 2.09
PHF23-204ENST00000570899 SNAPC4Q5SXM2 1469 aa28.09■■■□□ 2.09
PHF23-204ENST00000570899 ARAP1Q96P48 1450 aa28.09■■■□□ 2.09
PHF23-204ENST00000570899 CUX1P39880 1505 aa28.08■■■□□ 2.08
PHF23-204ENST00000570899 CHMP7Q8WUX9 453 aaPredicted RBP28.06■■■□□ 2.08
PHF23-204ENST00000570899 MAGI1Q96QZ7 1491 aaPredicted RBP28.02■■■□□ 2.08
PHF23-204ENST00000570899 TRHP20396 242 aaPredicted RBP28.01■■■□□ 2.07
PHF23-204ENST00000570899 GRIN2BQ13224 1484 aa28.01■■■□□ 2.07
PHF23-204ENST00000570899 SYNJ1O43426 1573 aa27.99■■■□□ 2.07
PHF23-204ENST00000570899 CLASP1Q7Z460 1538 aa27.96■■■□□ 2.07
PHF23-204ENST00000570899 SYNJ2O15056 1496 aa27.93■■■□□ 2.06
PHF23-204ENST00000570899 GAPVD1Q14C86 1478 aa27.89■■■□□ 2.05
PHF23-204ENST00000570899 SUPT5HO00267 1087 aaKnown RBP27.86■■■□□ 2.05
PHF23-204ENST00000570899 PBRM1Q86U86 1689 aa27.86■■■□□ 2.05
PHF23-204ENST00000570899 ABCA10Q8WWZ4 1543 aa27.82■■■□□ 2.04
PHF23-204ENST00000570899 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
PHF23-204ENST00000570899 WRNQ14191 1432 aaPredicted RBP eCLIP27.71■■■□□ 2.032e-6■■■■□ 22.3
PHF23-204ENST00000570899 GRIN2AQ12879 1464 aa27.64■■■□□ 2.01
PHF23-204ENST00000570899 TOP2BQ02880 1626 aa27.59■■■□□ 2.01
PHF23-204ENST00000570899 BIVM-ERCC5R4GMW8 1640 aa27.59■■■□□ 2.01
PHF23-204ENST00000570899 ADAMTS12P58397 1594 aa27.58■■■□□ 2.01
PHF23-204ENST00000570899 FHAD1B1AJZ9 1412 aa27.53■■■□□ 2
PHF23-204ENST00000570899 NUP160Q12769 1436 aa27.53■■■□□ 2
PHF23-204ENST00000570899 CEP170Q5SW79 1584 aa27.52■■■□□ 2
PHF23-204ENST00000570899 ERCC6L2Q5T890 1561 aa27.49■■□□□ 1.99
PHF23-204ENST00000570899 ERICH3Q5RHP9 1530 aa27.47■■□□□ 1.99
PHF23-204ENST00000570899 SHROOM2Q13796 1616 aa27.41■■□□□ 1.98
PHF23-204ENST00000570899 AEBP2Q6ZN18 517 aaPredicted RBP27.34■■□□□ 1.97
PHF23-204ENST00000570899 PRG4Q92954 1404 aaPredicted RBP27.32■■□□□ 1.96
PHF23-204ENST00000570899 JPH4Q96JJ6 628 aa27.3■■□□□ 1.96
PHF23-204ENST00000570899 RUSC2Q8N2Y8 1516 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms