RNA–Protein interactions for RNA: ENST00000570852.1

KCNAB3-203, Transcript of potassium voltage-gated channel subfamily A regulatory beta subunit 3, humanhuman

TSL 5

Gene KCNAB3, Length 1,315 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3-203ENST00000570852 NISCHQ9Y2I1 1504 aa46.65■■■■■ 5.06
KCNAB3-203ENST00000570852 ABCC9O60706 1549 aa41.71■■■■■ 4.27
KCNAB3-203ENST00000570852 CCDC180Q9P1Z9 1646 aa41.65■■■■■ 4.26
KCNAB3-203ENST00000570852 RB1CC1Q8TDY2 1594 aa39.63■■■■□ 3.93
KCNAB3-203ENST00000570852 DCAF8L2P0C7V8 631 aa39.54■■■■□ 3.92
KCNAB3-203ENST00000570852 NACADO15069 1562 aa39.39■■■■□ 3.9
KCNAB3-203ENST00000570852 DNAJC5BQ9UF47 199 aa39.09■■■■□ 3.85
KCNAB3-203ENST00000570852 PABPN1Q86U42 306 aaKnown RBP eCLIP38.96■■■■□ 3.83
KCNAB3-203ENST00000570852 MYO15BQ96JP2 1530 aa38.83■■■■□ 3.81
KCNAB3-203ENST00000570852 UNC13AQ9UPW8 1703 aa38.78■■■■□ 3.8
KCNAB3-203ENST00000570852 ZCCHC6Q5VYS8 1495 aaKnown RBP38.65■■■■□ 3.78
KCNAB3-203ENST00000570852 BICRAQ9NZM4 1560 aa38.54■■■■□ 3.76
KCNAB3-203ENST00000570852 DCAF1Q9Y4B6 1507 aa38.43■■■■□ 3.74
KCNAB3-203ENST00000570852 SCRIBQ14160 1630 aa38.12■■■■□ 3.69
KCNAB3-203ENST00000570852 SHROOM4Q9ULL8 1493 aa37.84■■■■□ 3.65
KCNAB3-203ENST00000570852 CC2D2AQ9P2K1 1620 aa37.61■■■■□ 3.61
KCNAB3-203ENST00000570852 EIF4G1Q04637 1599 aaKnown RBP37.55■■■■□ 3.6
KCNAB3-203ENST00000570852 CECR2Q9BXF3 1484 aa37.49■■■■□ 3.59
KCNAB3-203ENST00000570852 NCAPD3P42695 1498 aa36.41■■■■□ 3.42
KCNAB3-203ENST00000570852 ATAD2BQ9ULI0 1458 aa36.36■■■■□ 3.41
KCNAB3-203ENST00000570852 SMARCA4P51532 1647 aa36.33■■■■□ 3.41
KCNAB3-203ENST00000570852 SMARCA2P51531 1590 aa36.19■■■■□ 3.38
KCNAB3-203ENST00000570852 BAZ1AQ9NRL2 1556 aaPredicted RBP36.14■■■■□ 3.38
KCNAB3-203ENST00000570852 HMGXB3Q12766 1538 aa36.08■■■■□ 3.37
KCNAB3-203ENST00000570852 MROH2BQ7Z745 1585 aa36■■■■□ 3.35
KCNAB3-203ENST00000570852 BAZ1BQ9UIG0 1483 aaKnown RBP35.99■■■■□ 3.35
KCNAB3-203ENST00000570852 ERCC6Q03468 1493 aa35.93■■■■□ 3.34
KCNAB3-203ENST00000570852 PEG3Q9GZU2 1588 aa35.91■■■■□ 3.34
KCNAB3-203ENST00000570852 NESP48681 1621 aa35.89■■■■□ 3.34
KCNAB3-203ENST00000570852 CUX2O14529 1486 aa35.73■■■■□ 3.31
KCNAB3-203ENST00000570852 DNAJC5Q9H3Z4 198 aa35.65■■■■□ 3.3
KCNAB3-203ENST00000570852 WIZO95785 1651 aa35.58■■■■□ 3.29
KCNAB3-203ENST00000570852 LAMC3Q9Y6N6 1575 aa35.51■■■■□ 3.27
KCNAB3-203ENST00000570852 THOC2Q8NI27 1593 aaKnown RBP35.36■■■■□ 3.25
KCNAB3-203ENST00000570852 CADPSQ9ULU8 1353 aa35.35■■■■□ 3.25
KCNAB3-203ENST00000570852 PDS5BQ9NTI5 1447 aa35.35■■■■□ 3.25
KCNAB3-203ENST00000570852 KIF21AQ7Z4S6 1674 aa35.35■■■■□ 3.25
KCNAB3-203ENST00000570852 RSF1Q96T23 1441 aaPredicted RBP35.32■■■■□ 3.24
KCNAB3-203ENST00000570852 TOP2AP11388 1531 aaKnown RBP35.05■■■■□ 3.2
KCNAB3-203ENST00000570852 MRC2Q9UBG0 1479 aa35.03■■■■□ 3.2
KCNAB3-203ENST00000570852 CFTRP13569 1480 aa34.95■■■■□ 3.19
KCNAB3-203ENST00000570852 FANCD2Q9BXW9 1451 aa34.94■■■■□ 3.18
KCNAB3-203ENST00000570852 CEP164Q9UPV0 1460 aa34.93■■■■□ 3.18
KCNAB3-203ENST00000570852 WDR62O43379 1518 aa34.91■■■■□ 3.18
KCNAB3-203ENST00000570852 CCDC88BA6NC98 1476 aa34.75■■■■□ 3.15
KCNAB3-203ENST00000570852 URB2Q14146 1524 aaKnown RBP34.67■■■■□ 3.14
KCNAB3-203ENST00000570852 PRDM2Q13029 1718 aa34.52■■■■□ 3.12
KCNAB3-203ENST00000570852 SUPT5HO00267 1087 aaKnown RBP34.35■■■■□ 3.09
KCNAB3-203ENST00000570852 TOPBP1Q92547 1522 aa34.3■■■■□ 3.08
KCNAB3-203ENST00000570852 OSCARQ8IYS5 282 aa34.27■■■■□ 3.08
KCNAB3-203ENST00000570852 TRIM41Q8WV44 630 aa34.26■■■■□ 3.07
KCNAB3-203ENST00000570852 ZNF608Q9ULD9 1512 aaPredicted RBP34.25■■■■□ 3.07
KCNAB3-203ENST00000570852 IFT140Q96RY7 1462 aa34.22■■■■□ 3.07
KCNAB3-203ENST00000570852 ABCC8Q09428 1581 aa34.16■■■■□ 3.06
KCNAB3-203ENST00000570852 DNMBPQ6XZF7 1577 aa34.14■■■■□ 3.06
KCNAB3-203ENST00000570852 AQRO60306 1485 aaKnown RBP eCLIP33.99■■■■□ 3.03
KCNAB3-203ENST00000570852 EIF4G3O43432 1585 aaKnown RBP33.96■■■■□ 3.03
KCNAB3-203ENST00000570852 POLA1P09884 1462 aaPredicted RBP33.96■■■■□ 3.03
KCNAB3-203ENST00000570852 TARBP1Q13395 1621 aaKnown RBP33.96■■■■□ 3.03
KCNAB3-203ENST00000570852 RAD54L2Q9Y4B4 1467 aa33.92■■■■□ 3.02
KCNAB3-203ENST00000570852 SOGA1O94964 1423 aa33.85■■■■□ 3.01
KCNAB3-203ENST00000570852 TDRD9Q8NDG6 1382 aaKnown RBP33.82■■■■□ 3
KCNAB3-203ENST00000570852 CUX1P39880 1505 aa33.79■■■■□ 3
KCNAB3-203ENST00000570852 FGD5Q6ZNL6 1462 aa33.79■■■■□ 3
KCNAB3-203ENST00000570852 FBLN2P98095 1184 aa33.79■■■■□ 3
KCNAB3-203ENST00000570852 RIMBP3CA6NJZ7 1639 aa33.73■■■□□ 2.99
KCNAB3-203ENST00000570852 RIMBP3BA6NNM3 1639 aa33.73■■■□□ 2.99
KCNAB3-203ENST00000570852 RIMBP3Q9UFD9 1639 aa33.73■■■□□ 2.99
KCNAB3-203ENST00000570852 CHD1O14646 1710 aa33.71■■■□□ 2.99
KCNAB3-203ENST00000570852 ARHGEF11O15085 1522 aa33.64■■■□□ 2.98
KCNAB3-203ENST00000570852 SNAPC4Q5SXM2 1469 aa33.57■■■□□ 2.96
KCNAB3-203ENST00000570852 CYB5RLQ6IPT4 315 aa33.53■■■□□ 2.96
KCNAB3-203ENST00000570852 CHMP7Q8WUX9 453 aaPredicted RBP33.51■■■□□ 2.95
KCNAB3-203ENST00000570852 WDR97A6NE52 1622 aa33.48■■■□□ 2.95
KCNAB3-203ENST00000570852 GRIN2BQ13224 1484 aa33.48■■■□□ 2.95
KCNAB3-203ENST00000570852 GAPVD1Q14C86 1478 aa33.41■■■□□ 2.94
KCNAB3-203ENST00000570852 MAGI1Q96QZ7 1491 aaPredicted RBP33.41■■■□□ 2.94
KCNAB3-203ENST00000570852 ABCA10Q8WWZ4 1543 aa33.37■■■□□ 2.93
KCNAB3-203ENST00000570852 ARAP1Q96P48 1450 aa33.35■■■□□ 2.93
KCNAB3-203ENST00000570852 PBRM1Q86U86 1689 aa33.33■■■□□ 2.93
KCNAB3-203ENST00000570852 SYNJ2O15056 1496 aa33.33■■■□□ 2.93
KCNAB3-203ENST00000570852 WRNQ14191 1432 aaPredicted RBP eCLIP33.29■■■□□ 2.92
KCNAB3-203ENST00000570852 CLASP1Q7Z460 1538 aa33.29■■■□□ 2.92
KCNAB3-203ENST00000570852 ABCA5Q8WWZ7 1642 aa33.28■■■□□ 2.92
KCNAB3-203ENST00000570852 SYNJ1O43426 1573 aa33.28■■■□□ 2.92
KCNAB3-203ENST00000570852 TOP2BQ02880 1626 aa33.24■■■□□ 2.91
KCNAB3-203ENST00000570852 BIVM-ERCC5R4GMW8 1640 aa33.22■■■□□ 2.91
KCNAB3-203ENST00000570852 TRHP20396 242 aaPredicted RBP33.09■■■□□ 2.89
KCNAB3-203ENST00000570852 GRIN2AQ12879 1464 aa33.05■■■□□ 2.88
KCNAB3-203ENST00000570852 ADAMTS12P58397 1594 aa33.02■■■□□ 2.88
KCNAB3-203ENST00000570852 FHAD1B1AJZ9 1412 aa32.98■■■□□ 2.87
KCNAB3-203ENST00000570852 CEP170Q5SW79 1584 aa32.94■■■□□ 2.86
KCNAB3-203ENST00000570852 NUP160Q12769 1436 aa32.92■■■□□ 2.86
KCNAB3-203ENST00000570852 ERICH3Q5RHP9 1530 aa32.92■■■□□ 2.86
KCNAB3-203ENST00000570852 ERCC6L2Q5T890 1561 aa32.9■■■□□ 2.86
KCNAB3-203ENST00000570852 SHROOM2Q13796 1616 aa32.72■■■□□ 2.83
KCNAB3-203ENST00000570852 JPH4Q96JJ6 628 aa32.7■■■□□ 2.82
KCNAB3-203ENST00000570852 IGF1RP08069 1367 aa32.68■■■□□ 2.82
KCNAB3-203ENST00000570852 PRG4Q92954 1404 aaPredicted RBP32.67■■■□□ 2.82
KCNAB3-203ENST00000570852 KIF27Q86VH2 1401 aa32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms