RNA–Protein interactions for RNA: ENST00000570801.1

NME2-208, Transcript of NME/NM23 nucleoside diphosphate kinase 2, humanhuman

TSL 2

Gene NME2, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME2-208ENST00000570801 NISCHQ9Y2I1 1504 aa31.9■■■□□ 2.7
NME2-208ENST00000570801 ABCC9O60706 1549 aa29.15■■■□□ 2.26
NME2-208ENST00000570801 CCDC180Q9P1Z9 1646 aa28.78■■■□□ 2.2
NME2-208ENST00000570801 RB1CC1Q8TDY2 1594 aa27.57■■■□□ 2
NME2-208ENST00000570801 DNAJC5BQ9UF47 199 aa27.54■■■□□ 2
NME2-208ENST00000570801 NACADO15069 1562 aa27.27■■□□□ 1.96
NME2-208ENST00000570801 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.94
NME2-208ENST00000570801 PABPN1Q86U42 306 aaKnown RBP eCLIP27.09■■□□□ 1.93
NME2-208ENST00000570801 UNC13AQ9UPW8 1703 aa26.93■■□□□ 1.9
NME2-208ENST00000570801 BICRAQ9NZM4 1560 aa26.73■■□□□ 1.87
NME2-208ENST00000570801 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
NME2-208ENST00000570801 ZCCHC6Q5VYS8 1495 aaKnown RBP26.38■■□□□ 1.81
NME2-208ENST00000570801 SHROOM4Q9ULL8 1493 aa26.32■■□□□ 1.8
NME2-208ENST00000570801 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
NME2-208ENST00000570801 SCRIBQ14160 1630 aa26.28■■□□□ 1.8
NME2-208ENST00000570801 CC2D2AQ9P2K1 1620 aa26.28■■□□□ 1.8
NME2-208ENST00000570801 CECR2Q9BXF3 1484 aa26.27■■□□□ 1.8
NME2-208ENST00000570801 EIF4G1Q04637 1599 aaKnown RBP26.14■■□□□ 1.78
NME2-208ENST00000570801 DNAJC5Q9H3Z4 198 aa25.52■■□□□ 1.68
NME2-208ENST00000570801 ERCC6Q03468 1493 aa25.23■■□□□ 1.63
NME2-208ENST00000570801 CUX2O14529 1486 aa25.21■■□□□ 1.63
NME2-208ENST00000570801 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
NME2-208ENST00000570801 ATAD2BQ9ULI0 1458 aa25.07■■□□□ 1.6
NME2-208ENST00000570801 SMARCA2P51531 1590 aa25■■□□□ 1.59
NME2-208ENST00000570801 SMARCA4P51532 1647 aa24.98■■□□□ 1.59
NME2-208ENST00000570801 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
NME2-208ENST00000570801 NESP48681 1621 aa24.93■■□□□ 1.58
NME2-208ENST00000570801 BAZ1BQ9UIG0 1483 aaKnown RBP24.85■■□□□ 1.57
NME2-208ENST00000570801 BAZ1AQ9NRL2 1556 aaPredicted RBP24.81■■□□□ 1.56
NME2-208ENST00000570801 THOC2Q8NI27 1593 aaKnown RBP24.72■■□□□ 1.55
NME2-208ENST00000570801 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
NME2-208ENST00000570801 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
NME2-208ENST00000570801 KIF21AQ7Z4S6 1674 aa24.61■■□□□ 1.53
NME2-208ENST00000570801 MROH2BQ7Z745 1585 aa24.59■■□□□ 1.53
NME2-208ENST00000570801 PDS5BQ9NTI5 1447 aa24.57■■□□□ 1.52
NME2-208ENST00000570801 TRIM41Q8WV44 630 aa24.42■■□□□ 1.5
NME2-208ENST00000570801 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
NME2-208ENST00000570801 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
NME2-208ENST00000570801 WIZO95785 1651 aa24.31■■□□□ 1.48
NME2-208ENST00000570801 WDR62O43379 1518 aa24.3■■□□□ 1.48
NME2-208ENST00000570801 CEP164Q9UPV0 1460 aa24.25■■□□□ 1.47
NME2-208ENST00000570801 FANCD2Q9BXW9 1451 aa24.17■■□□□ 1.46
NME2-208ENST00000570801 CFTRP13569 1480 aa24.05■■□□□ 1.44
NME2-208ENST00000570801 OSCARQ8IYS5 282 aa24.01■■□□□ 1.43
NME2-208ENST00000570801 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
NME2-208ENST00000570801 URB2Q14146 1524 aaKnown RBP23.97■■□□□ 1.43
NME2-208ENST00000570801 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.42
NME2-208ENST00000570801 PRDM2Q13029 1718 aa23.82■■□□□ 1.4
NME2-208ENST00000570801 RIMBP3CA6NJZ7 1639 aa23.76■■□□□ 1.39
NME2-208ENST00000570801 RIMBP3BA6NNM3 1639 aa23.76■■□□□ 1.39
NME2-208ENST00000570801 RIMBP3Q9UFD9 1639 aa23.76■■□□□ 1.39
NME2-208ENST00000570801 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
NME2-208ENST00000570801 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
NME2-208ENST00000570801 CCDC88BA6NC98 1476 aa23.69■■□□□ 1.38
NME2-208ENST00000570801 TOPBP1Q92547 1522 aa23.66■■□□□ 1.38
NME2-208ENST00000570801 ARHGEF11O15085 1522 aa23.64■■□□□ 1.38
NME2-208ENST00000570801 EIF4G3O43432 1585 aaKnown RBP23.61■■□□□ 1.37
NME2-208ENST00000570801 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
NME2-208ENST00000570801 DNMBPQ6XZF7 1577 aa23.56■■□□□ 1.36
NME2-208ENST00000570801 CYB5RLQ6IPT4 315 aa23.51■■□□□ 1.35
NME2-208ENST00000570801 CHD1O14646 1710 aa23.5■■□□□ 1.35
NME2-208ENST00000570801 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.354e-7■■□□□ 14.3
NME2-208ENST00000570801 FBLN2P98095 1184 aa23.48■■□□□ 1.35
NME2-208ENST00000570801 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.34
NME2-208ENST00000570801 TRHP20396 242 aaPredicted RBP23.41■■□□□ 1.34
NME2-208ENST00000570801 POLA1P09884 1462 aaPredicted RBP23.4■■□□□ 1.34
NME2-208ENST00000570801 ARAP1Q96P48 1450 aa23.38■■□□□ 1.33
NME2-208ENST00000570801 RAD54L2Q9Y4B4 1467 aa23.34■■□□□ 1.33
NME2-208ENST00000570801 TDRD9Q8NDG6 1382 aaKnown RBP23.3■■□□□ 1.32
NME2-208ENST00000570801 SOGA1O94964 1423 aa23.29■■□□□ 1.32
NME2-208ENST00000570801 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
NME2-208ENST00000570801 FGD5Q6ZNL6 1462 aa23.23■■□□□ 1.31
NME2-208ENST00000570801 CHMP7Q8WUX9 453 aaPredicted RBP23.2■■□□□ 1.3
NME2-208ENST00000570801 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
NME2-208ENST00000570801 WDR97A6NE52 1622 aa23.18■■□□□ 1.3
NME2-208ENST00000570801 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
NME2-208ENST00000570801 MAGI1Q96QZ7 1491 aaPredicted RBP23.15■■□□□ 1.3
NME2-208ENST00000570801 CUX1P39880 1505 aa23.14■■□□□ 1.3
NME2-208ENST00000570801 GRIN2BQ13224 1484 aa23.13■■□□□ 1.29
NME2-208ENST00000570801 SYNJ2O15056 1496 aa23.08■■□□□ 1.29
NME2-208ENST00000570801 PBRM1Q86U86 1689 aa23.04■■□□□ 1.28
NME2-208ENST00000570801 GAPVD1Q14C86 1478 aa23.01■■□□□ 1.27
NME2-208ENST00000570801 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
NME2-208ENST00000570801 ABCA5Q8WWZ7 1642 aa22.92■■□□□ 1.26
NME2-208ENST00000570801 ABCA10Q8WWZ4 1543 aa22.91■■□□□ 1.26
NME2-208ENST00000570801 GRIN2AQ12879 1464 aa22.84■■□□□ 1.25
NME2-208ENST00000570801 ERCC6L2Q5T890 1561 aa22.82■■□□□ 1.24
NME2-208ENST00000570801 ADAMTS12P58397 1594 aa22.8■■□□□ 1.24
NME2-208ENST00000570801 SUPT5HO00267 1087 aaKnown RBP22.78■■□□□ 1.24
NME2-208ENST00000570801 WRNQ14191 1432 aaPredicted RBP eCLIP22.78■■□□□ 1.24
NME2-208ENST00000570801 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
NME2-208ENST00000570801 NUP160Q12769 1436 aa22.74■■□□□ 1.23
NME2-208ENST00000570801 FHAD1B1AJZ9 1412 aa22.69■■□□□ 1.22
NME2-208ENST00000570801 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
NME2-208ENST00000570801 TOP2BQ02880 1626 aa22.67■■□□□ 1.22
NME2-208ENST00000570801 SHROOM2Q13796 1616 aa22.67■■□□□ 1.22
NME2-208ENST00000570801 ERICH3Q5RHP9 1530 aa22.62■■□□□ 1.21
NME2-208ENST00000570801 PRG4Q92954 1404 aaPredicted RBP22.59■■□□□ 1.21
NME2-208ENST00000570801 KIF13AQ9H1H9 1805 aa22.56■■□□□ 1.2
NME2-208ENST00000570801 JPH4Q96JJ6 628 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms