RNA–Protein interactions for RNA: ENST00000570627.1

YBX2-202, Transcript of Y-box binding protein 2, humanhuman

TSL 5

Gene YBX2, Length 653 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX2-202ENST00000570627 NISCHQ9Y2I1 1504 aa29.78■■■□□ 2.36
YBX2-202ENST00000570627 ABCC9O60706 1549 aa28.38■■■□□ 2.13
YBX2-202ENST00000570627 DNAJC5BQ9UF47 199 aa27.63■■■□□ 2.01
YBX2-202ENST00000570627 CCDC180Q9P1Z9 1646 aa27.19■■□□□ 1.94
YBX2-202ENST00000570627 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
YBX2-202ENST00000570627 PABPN1Q86U42 306 aaKnown RBP eCLIP26.27■■□□□ 1.8
YBX2-202ENST00000570627 DNAJC5Q9H3Z4 198 aa26.05■■□□□ 1.76
YBX2-202ENST00000570627 UNC13AQ9UPW8 1703 aa26■■□□□ 1.75
YBX2-202ENST00000570627 NACADO15069 1562 aa25.92■■□□□ 1.74
YBX2-202ENST00000570627 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
YBX2-202ENST00000570627 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
YBX2-202ENST00000570627 CECR2Q9BXF3 1484 aa25.62■■□□□ 1.69
YBX2-202ENST00000570627 CC2D2AQ9P2K1 1620 aa25.56■■□□□ 1.68
YBX2-202ENST00000570627 EIF4G1Q04637 1599 aaKnown RBP25.21■■□□□ 1.63
YBX2-202ENST00000570627 MYO15BQ96JP2 1530 aa25.11■■□□□ 1.61
YBX2-202ENST00000570627 SHROOM4Q9ULL8 1493 aa25.09■■□□□ 1.61
YBX2-202ENST00000570627 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
YBX2-202ENST00000570627 CUX2O14529 1486 aa24.77■■□□□ 1.56
YBX2-202ENST00000570627 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
YBX2-202ENST00000570627 ERCC6Q03468 1493 aa24.52■■□□□ 1.52
YBX2-202ENST00000570627 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.5
YBX2-202ENST00000570627 DCAF1Q9Y4B6 1507 aa24.42■■□□□ 1.5
YBX2-202ENST00000570627 NESP48681 1621 aa24.1■■□□□ 1.45
YBX2-202ENST00000570627 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
YBX2-202ENST00000570627 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
YBX2-202ENST00000570627 SMARCA2P51531 1590 aa23.85■■□□□ 1.41
YBX2-202ENST00000570627 KIF21AQ7Z4S6 1674 aa23.77■■□□□ 1.4
YBX2-202ENST00000570627 ATAD2BQ9ULI0 1458 aa23.77■■□□□ 1.4
YBX2-202ENST00000570627 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
YBX2-202ENST00000570627 BAZ1AQ9NRL2 1556 aaPredicted RBP23.62■■□□□ 1.37
YBX2-202ENST00000570627 LAMC3Q9Y6N6 1575 aa23.61■■□□□ 1.37
YBX2-202ENST00000570627 SMARCA4P51532 1647 aa23.51■■□□□ 1.35
YBX2-202ENST00000570627 BAZ1BQ9UIG0 1483 aaKnown RBP23.49■■□□□ 1.35
YBX2-202ENST00000570627 OSCARQ8IYS5 282 aa23.47■■□□□ 1.35
YBX2-202ENST00000570627 PDS5BQ9NTI5 1447 aa23.47■■□□□ 1.35
YBX2-202ENST00000570627 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
YBX2-202ENST00000570627 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
YBX2-202ENST00000570627 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
YBX2-202ENST00000570627 MRC2Q9UBG0 1479 aa23.41■■□□□ 1.34
YBX2-202ENST00000570627 WDR62O43379 1518 aa23.38■■□□□ 1.33
YBX2-202ENST00000570627 AEBP2Q6ZN18 517 aaPredicted RBP23.29■■□□□ 1.32
YBX2-202ENST00000570627 PEG3Q9GZU2 1588 aa23.21■■□□□ 1.31
YBX2-202ENST00000570627 TRHP20396 242 aaPredicted RBP23.2■■□□□ 1.3
YBX2-202ENST00000570627 ARHGEF11O15085 1522 aa23.18■■□□□ 1.3
YBX2-202ENST00000570627 CADPSQ9ULU8 1353 aa23.18■■□□□ 1.3
YBX2-202ENST00000570627 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
YBX2-202ENST00000570627 CYB5RLQ6IPT4 315 aa23.08■■□□□ 1.29
YBX2-202ENST00000570627 MROH2BQ7Z745 1585 aa23.01■■□□□ 1.27
YBX2-202ENST00000570627 FANCD2Q9BXW9 1451 aa22.98■■□□□ 1.27
YBX2-202ENST00000570627 URB2Q14146 1524 aaKnown RBP22.9■■□□□ 1.26
YBX2-202ENST00000570627 ARAP1Q96P48 1450 aa22.9■■□□□ 1.26
YBX2-202ENST00000570627 ZNF608Q9ULD9 1512 aaPredicted RBP22.83■■□□□ 1.25
YBX2-202ENST00000570627 WIZO95785 1651 aa22.73■■□□□ 1.23
YBX2-202ENST00000570627 CHD1O14646 1710 aa22.73■■□□□ 1.23
YBX2-202ENST00000570627 CFTRP13569 1480 aa22.7■■□□□ 1.22
YBX2-202ENST00000570627 EIF4G3O43432 1585 aaKnown RBP22.63■■□□□ 1.21
YBX2-202ENST00000570627 IFT140Q96RY7 1462 aa22.63■■□□□ 1.21
YBX2-202ENST00000570627 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
YBX2-202ENST00000570627 FBLN2P98095 1184 aa22.54■■□□□ 1.2
YBX2-202ENST00000570627 ILDR1Q86SU0 546 aaPredicted RBP22.54■■□□□ 1.2
YBX2-202ENST00000570627 AQRO60306 1485 aaKnown RBP eCLIP22.47■■□□□ 1.19
YBX2-202ENST00000570627 PRDM2Q13029 1718 aa22.46■■□□□ 1.19
YBX2-202ENST00000570627 TOPBP1Q92547 1522 aa22.42■■□□□ 1.18
YBX2-202ENST00000570627 CLASP1Q7Z460 1538 aa22.34■■□□□ 1.17
YBX2-202ENST00000570627 TARBP1Q13395 1621 aaKnown RBP22.33■■□□□ 1.17
YBX2-202ENST00000570627 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
YBX2-202ENST00000570627 DNMBPQ6XZF7 1577 aa22.23■■□□□ 1.15
YBX2-202ENST00000570627 GAPVD1Q14C86 1478 aa22.19■■□□□ 1.14
YBX2-202ENST00000570627 SNAPC4Q5SXM2 1469 aa22.19■■□□□ 1.14
YBX2-202ENST00000570627 SYNJ1O43426 1573 aa22.19■■□□□ 1.14
YBX2-202ENST00000570627 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
YBX2-202ENST00000570627 TDRD9Q8NDG6 1382 aaKnown RBP22.14■■□□□ 1.14
YBX2-202ENST00000570627 POLA1P09884 1462 aaPredicted RBP22.13■■□□□ 1.13
YBX2-202ENST00000570627 RAD54L2Q9Y4B4 1467 aa22.13■■□□□ 1.13
YBX2-202ENST00000570627 CHMP7Q8WUX9 453 aaPredicted RBP22.12■■□□□ 1.13
YBX2-202ENST00000570627 KIF13AQ9H1H9 1805 aa22.09■■□□□ 1.13
YBX2-202ENST00000570627 KDM4FA0A1W2PPD8 638 aa22.05■■□□□ 1.12
YBX2-202ENST00000570627 CCDC88BA6NC98 1476 aa22.04■■□□□ 1.12
YBX2-202ENST00000570627 ERCC6L2Q5T890 1561 aa22.03■■□□□ 1.12
YBX2-202ENST00000570627 MAGI1Q96QZ7 1491 aaPredicted RBP21.98■■□□□ 1.11
YBX2-202ENST00000570627 SOGA1O94964 1423 aa21.97■■□□□ 1.11
YBX2-202ENST00000570627 SYNJ2O15056 1496 aa21.96■■□□□ 1.11
YBX2-202ENST00000570627 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
YBX2-202ENST00000570627 WDR97A6NE52 1622 aa21.88■■□□□ 1.09
YBX2-202ENST00000570627 PBRM1Q86U86 1689 aa21.85■■□□□ 1.09
YBX2-202ENST00000570627 FGD5Q6ZNL6 1462 aa21.85■■□□□ 1.09
YBX2-202ENST00000570627 CEP170Q5SW79 1584 aa21.79■■□□□ 1.08
YBX2-202ENST00000570627 KDM6BO15054 1643 aa21.77■■□□□ 1.08
YBX2-202ENST00000570627 FAM69CQ0P6D2 419 aa21.76■■□□□ 1.07
YBX2-202ENST00000570627 TSPOAP1O95153 1857 aa21.71■■□□□ 1.07
YBX2-202ENST00000570627 HECW2Q9P2P5 1572 aa21.7■■□□□ 1.06
YBX2-202ENST00000570627 ABCC10Q5T3U5 1492 aa21.7■■□□□ 1.06
YBX2-202ENST00000570627 DIP2BQ9P265 1576 aa21.67■■□□□ 1.06
YBX2-202ENST00000570627 CUX1P39880 1505 aa21.67■■□□□ 1.06
YBX2-202ENST00000570627 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
YBX2-202ENST00000570627 GRIN2AQ12879 1464 aa21.64■■□□□ 1.06
YBX2-202ENST00000570627 ADGRL1O94910 1474 aa21.62■■□□□ 1.05
YBX2-202ENST00000570627 ABCA5Q8WWZ7 1642 aa21.6■■□□□ 1.05
YBX2-202ENST00000570627 NUP160Q12769 1436 aa21.59■■□□□ 1.05
YBX2-202ENST00000570627 MAPKBP1O60336 1514 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms