RNA–Protein interactions for RNA: ENST00000570626.1

RBFOX1-221, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-221ENST00000570626 NISCHQ9Y2I1 1504 aa25.54■■□□□ 1.68
RBFOX1-221ENST00000570626 ABCC9O60706 1549 aa24.34■■□□□ 1.49
RBFOX1-221ENST00000570626 DNAJC5BQ9UF47 199 aa23.73■■□□□ 1.39
RBFOX1-221ENST00000570626 CCDC180Q9P1Z9 1646 aa23.37■■□□□ 1.33
RBFOX1-221ENST00000570626 RB1CC1Q8TDY2 1594 aa22.71■■□□□ 1.23
RBFOX1-221ENST00000570626 PABPN1Q86U42 306 aaKnown RBP eCLIP22.47■■□□□ 1.19
RBFOX1-221ENST00000570626 DNAJC5Q9H3Z4 198 aa22.46■■□□□ 1.19
RBFOX1-221ENST00000570626 NACADO15069 1562 aa22.29■■□□□ 1.16
RBFOX1-221ENST00000570626 UNC13AQ9UPW8 1703 aa22.26■■□□□ 1.15
RBFOX1-221ENST00000570626 BICRAQ9NZM4 1560 aa22.15■■□□□ 1.14
RBFOX1-221ENST00000570626 CECR2Q9BXF3 1484 aa22.02■■□□□ 1.12
RBFOX1-221ENST00000570626 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
RBFOX1-221ENST00000570626 DCAF8L2P0C7V8 631 aa21.89■■□□□ 1.09
RBFOX1-221ENST00000570626 SHROOM4Q9ULL8 1493 aa21.68■■□□□ 1.06
RBFOX1-221ENST00000570626 EIF4G1Q04637 1599 aaKnown RBP21.65■■□□□ 1.06
RBFOX1-221ENST00000570626 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
RBFOX1-221ENST00000570626 CUX2O14529 1486 aa21.37■■□□□ 1.01
RBFOX1-221ENST00000570626 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
RBFOX1-221ENST00000570626 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
RBFOX1-221ENST00000570626 ERCC6Q03468 1493 aa21.06■□□□□ 0.96
RBFOX1-221ENST00000570626 DCAF1Q9Y4B6 1507 aa21.02■□□□□ 0.96
RBFOX1-221ENST00000570626 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
RBFOX1-221ENST00000570626 AEBP2Q6ZN18 517 aaPredicted RBP20.75■□□□□ 0.91
RBFOX1-221ENST00000570626 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
RBFOX1-221ENST00000570626 NESP48681 1621 aa20.65■□□□□ 0.9
RBFOX1-221ENST00000570626 NCAPD3P42695 1498 aa20.59■□□□□ 0.89
RBFOX1-221ENST00000570626 SMARCA2P51531 1590 aa20.45■□□□□ 0.86
RBFOX1-221ENST00000570626 ATAD2BQ9ULI0 1458 aa20.41■□□□□ 0.86
RBFOX1-221ENST00000570626 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
RBFOX1-221ENST00000570626 KIF21AQ7Z4S6 1674 aa20.36■□□□□ 0.85
RBFOX1-221ENST00000570626 BAZ1AQ9NRL2 1556 aaPredicted RBP20.3■□□□□ 0.84
RBFOX1-221ENST00000570626 LAMC3Q9Y6N6 1575 aa20.3■□□□□ 0.84
RBFOX1-221ENST00000570626 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
RBFOX1-221ENST00000570626 PDS5BQ9NTI5 1447 aa20.18■□□□□ 0.82
RBFOX1-221ENST00000570626 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
RBFOX1-221ENST00000570626 OSCARQ8IYS5 282 aa20.15■□□□□ 0.82
RBFOX1-221ENST00000570626 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
RBFOX1-221ENST00000570626 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
RBFOX1-221ENST00000570626 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
RBFOX1-221ENST00000570626 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
RBFOX1-221ENST00000570626 WDR62O43379 1518 aa20.12■□□□□ 0.81
RBFOX1-221ENST00000570626 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
RBFOX1-221ENST00000570626 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
RBFOX1-221ENST00000570626 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
RBFOX1-221ENST00000570626 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
RBFOX1-221ENST00000570626 TRHP20396 242 aaPredicted RBP19.87■□□□□ 0.77
RBFOX1-221ENST00000570626 CEP164Q9UPV0 1460 aa19.83■□□□□ 0.76
RBFOX1-221ENST00000570626 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
RBFOX1-221ENST00000570626 FANCD2Q9BXW9 1451 aa19.71■□□□□ 0.75
RBFOX1-221ENST00000570626 MROH2BQ7Z745 1585 aa19.7■□□□□ 0.74
RBFOX1-221ENST00000570626 ARAP1Q96P48 1450 aa19.69■□□□□ 0.74
RBFOX1-221ENST00000570626 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
RBFOX1-221ENST00000570626 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
RBFOX1-221ENST00000570626 CFTRP13569 1480 aa19.49■□□□□ 0.71
RBFOX1-221ENST00000570626 CHD1O14646 1710 aa19.48■□□□□ 0.71
RBFOX1-221ENST00000570626 RSF1Q96T23 1441 aaPredicted RBP19.45■□□□□ 0.7
RBFOX1-221ENST00000570626 IFT140Q96RY7 1462 aa19.45■□□□□ 0.7
RBFOX1-221ENST00000570626 EIF4G3O43432 1585 aaKnown RBP19.43■□□□□ 0.7
RBFOX1-221ENST00000570626 WIZO95785 1651 aa19.41■□□□□ 0.7
RBFOX1-221ENST00000570626 ILDR1Q86SU0 546 aaPredicted RBP19.38■□□□□ 0.69
RBFOX1-221ENST00000570626 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
RBFOX1-221ENST00000570626 FBLN2P98095 1184 aa19.24■□□□□ 0.67
RBFOX1-221ENST00000570626 TOPBP1Q92547 1522 aa19.24■□□□□ 0.67
RBFOX1-221ENST00000570626 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.67
RBFOX1-221ENST00000570626 CLASP1Q7Z460 1538 aa19.22■□□□□ 0.67
RBFOX1-221ENST00000570626 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
RBFOX1-221ENST00000570626 DNMBPQ6XZF7 1577 aa19.09■□□□□ 0.65
RBFOX1-221ENST00000570626 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
RBFOX1-221ENST00000570626 SYNJ1O43426 1573 aa19.07■□□□□ 0.64
RBFOX1-221ENST00000570626 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
RBFOX1-221ENST00000570626 GAPVD1Q14C86 1478 aa19.05■□□□□ 0.64
RBFOX1-221ENST00000570626 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
RBFOX1-221ENST00000570626 POLA1P09884 1462 aaPredicted RBP18.98■□□□□ 0.63
RBFOX1-221ENST00000570626 KIF13AQ9H1H9 1805 aa18.95■□□□□ 0.62
RBFOX1-221ENST00000570626 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
RBFOX1-221ENST00000570626 KDM4FA0A1W2PPD8 638 aa18.94■□□□□ 0.62
RBFOX1-221ENST00000570626 RAD54L2Q9Y4B4 1467 aa18.93■□□□□ 0.62
RBFOX1-221ENST00000570626 CHMP7Q8WUX9 453 aaPredicted RBP18.93■□□□□ 0.62
RBFOX1-221ENST00000570626 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
RBFOX1-221ENST00000570626 ERCC6L2Q5T890 1561 aa18.87■□□□□ 0.61
RBFOX1-221ENST00000570626 WDR97A6NE52 1622 aa18.86■□□□□ 0.61
RBFOX1-221ENST00000570626 CCDC88BA6NC98 1476 aa18.86■□□□□ 0.61
RBFOX1-221ENST00000570626 SYNJ2O15056 1496 aa18.86■□□□□ 0.61
RBFOX1-221ENST00000570626 SOGA1O94964 1423 aa18.83■□□□□ 0.61
RBFOX1-221ENST00000570626 GRIN2BQ13224 1484 aa18.8■□□□□ 0.6
RBFOX1-221ENST00000570626 FGD5Q6ZNL6 1462 aa18.72■□□□□ 0.59
RBFOX1-221ENST00000570626 PBRM1Q86U86 1689 aa18.72■□□□□ 0.59
RBFOX1-221ENST00000570626 KDM6BO15054 1643 aa18.71■□□□□ 0.58
RBFOX1-221ENST00000570626 CEP170Q5SW79 1584 aa18.7■□□□□ 0.58
RBFOX1-221ENST00000570626 HECW2Q9P2P5 1572 aa18.67■□□□□ 0.58
RBFOX1-221ENST00000570626 ABCC10Q5T3U5 1492 aa18.65■□□□□ 0.58
RBFOX1-221ENST00000570626 FAM69CQ0P6D2 419 aa18.64■□□□□ 0.57
RBFOX1-221ENST00000570626 DIP2BQ9P265 1576 aa18.63■□□□□ 0.57
RBFOX1-221ENST00000570626 SHROOM2Q13796 1616 aa18.62■□□□□ 0.57
RBFOX1-221ENST00000570626 ADGRL1O94910 1474 aa18.58■□□□□ 0.57
RBFOX1-221ENST00000570626 GRIN2AQ12879 1464 aa18.58■□□□□ 0.56
RBFOX1-221ENST00000570626 CUX1P39880 1505 aa18.56■□□□□ 0.56
RBFOX1-221ENST00000570626 NUP160Q12769 1436 aa18.56■□□□□ 0.56
RBFOX1-221ENST00000570626 FBXO41Q8TF61 875 aa18.55■□□□□ 0.56
RBFOX1-221ENST00000570626 MAPKBP1O60336 1514 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms