RNA–Protein interactions for RNA: ENST00000570525.5

ABR-207, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-207ENST00000570525 NISCHQ9Y2I1 1504 aa34.25■■■■□ 3.07
ABR-207ENST00000570525 CCDC180Q9P1Z9 1646 aa29.83■■■□□ 2.37
ABR-207ENST00000570525 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
ABR-207ENST00000570525 DCAF1Q9Y4B6 1507 aa28.39■■■□□ 2.14
ABR-207ENST00000570525 MYO15BQ96JP2 1530 aa28.01■■■□□ 2.07
ABR-207ENST00000570525 DCAF8L2P0C7V8 631 aa27.96■■■□□ 2.07
ABR-207ENST00000570525 ABCC9O60706 1549 aa27.94■■■□□ 2.06
ABR-207ENST00000570525 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
ABR-207ENST00000570525 NACADO15069 1562 aa27.72■■■□□ 2.03
ABR-207ENST00000570525 RB1CC1Q8TDY2 1594 aa27.41■■□□□ 1.98
ABR-207ENST00000570525 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
ABR-207ENST00000570525 SUPT5HO00267 1087 aaKnown RBP26.88■■□□□ 1.89
ABR-207ENST00000570525 UNC13AQ9UPW8 1703 aa26.87■■□□□ 1.89
ABR-207ENST00000570525 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
ABR-207ENST00000570525 RSF1Q96T23 1441 aaPredicted RBP26.62■■□□□ 1.85
ABR-207ENST00000570525 CECR2Q9BXF3 1484 aa26.58■■□□□ 1.85
ABR-207ENST00000570525 MROH2BQ7Z745 1585 aa26.46■■□□□ 1.83
ABR-207ENST00000570525 BAZ1AQ9NRL2 1556 aaPredicted RBP26.43■■□□□ 1.82
ABR-207ENST00000570525 PABPN1Q86U42 306 aaKnown RBP eCLIP26.33■■□□□ 1.81
ABR-207ENST00000570525 SMARCA4P51532 1647 aa26.3■■□□□ 1.8
ABR-207ENST00000570525 WIZO95785 1651 aa26.22■■□□□ 1.79
ABR-207ENST00000570525 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
ABR-207ENST00000570525 TOP2AP11388 1531 aaKnown RBP26.02■■□□□ 1.76
ABR-207ENST00000570525 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
ABR-207ENST00000570525 ATAD2BQ9ULI0 1458 aa25.82■■□□□ 1.72
ABR-207ENST00000570525 SMARCA2P51531 1590 aa25.81■■□□□ 1.72
ABR-207ENST00000570525 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
ABR-207ENST00000570525 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
ABR-207ENST00000570525 BAZ1BQ9UIG0 1483 aaKnown RBP25.65■■□□□ 1.7
ABR-207ENST00000570525 HMGXB3Q12766 1538 aa25.59■■□□□ 1.69
ABR-207ENST00000570525 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
ABR-207ENST00000570525 CC2D2AQ9P2K1 1620 aa25.34■■□□□ 1.65
ABR-207ENST00000570525 TRIM41Q8WV44 630 aa25.29■■□□□ 1.64
ABR-207ENST00000570525 ABCC8Q09428 1581 aa25.19■■□□□ 1.62
ABR-207ENST00000570525 CFTRP13569 1480 aa25.05■■□□□ 1.6
ABR-207ENST00000570525 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
ABR-207ENST00000570525 SYNJ1O43426 1573 aa24.95■■□□□ 1.58
ABR-207ENST00000570525 PRDM2Q13029 1718 aa24.95■■□□□ 1.58
ABR-207ENST00000570525 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
ABR-207ENST00000570525 LOC105371045A0A1W2PR82 267 aa24.85■■□□□ 1.57
ABR-207ENST00000570525 TOP2BQ02880 1626 aa24.84■■□□□ 1.57
ABR-207ENST00000570525 BIVM-ERCC5R4GMW8 1640 aa24.84■■□□□ 1.57
ABR-207ENST00000570525 EEA1Q15075 1411 aa24.79■■□□□ 1.56
ABR-207ENST00000570525 FAM9AQ8IZU1 332 aaPredicted RBP24.79■■□□□ 1.56
ABR-207ENST00000570525 SOGA1O94964 1423 aa24.75■■□□□ 1.55
ABR-207ENST00000570525 CUX1P39880 1505 aa24.74■■□□□ 1.55
ABR-207ENST00000570525 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
ABR-207ENST00000570525 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
ABR-207ENST00000570525 RUSC2Q8N2Y8 1516 aa24.66■■□□□ 1.54
ABR-207ENST00000570525 FANCD2Q9BXW9 1451 aa24.63■■□□□ 1.53
ABR-207ENST00000570525 NESP48681 1621 aa24.61■■□□□ 1.53
ABR-207ENST00000570525 CSRNP3Q8WYN3 585 aa24.54■■□□□ 1.52
ABR-207ENST00000570525 KIF21BO75037 1637 aa24.49■■□□□ 1.51
ABR-207ENST00000570525 DNMBPQ6XZF7 1577 aa24.47■■□□□ 1.51
ABR-207ENST00000570525 CEP164Q9UPV0 1460 aa24.45■■□□□ 1.51
ABR-207ENST00000570525 GOLGA3Q08378 1498 aa24.44■■□□□ 1.5
ABR-207ENST00000570525 PDS5BQ9NTI5 1447 aa24.43■■□□□ 1.5
ABR-207ENST00000570525 FGD5Q6ZNL6 1462 aa24.42■■□□□ 1.5
ABR-207ENST00000570525 TOPBP1Q92547 1522 aa24.4■■□□□ 1.5
ABR-207ENST00000570525 TNIKQ9UKE5 1360 aa24.39■■□□□ 1.49
ABR-207ENST00000570525 KIF27Q86VH2 1401 aa24.37■■□□□ 1.49
ABR-207ENST00000570525 EHMT2Q96KQ7 1210 aa24.36■■□□□ 1.49
ABR-207ENST00000570525 URB2Q14146 1524 aaKnown RBP24.34■■□□□ 1.49
ABR-207ENST00000570525 KIF21AQ7Z4S6 1674 aa24.33■■□□□ 1.49
ABR-207ENST00000570525 PRXQ9BXM0 1461 aa24.31■■□□□ 1.48
ABR-207ENST00000570525 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
ABR-207ENST00000570525 POLA1P09884 1462 aaPredicted RBP24.29■■□□□ 1.48
ABR-207ENST00000570525 CUX2O14529 1486 aa24.27■■□□□ 1.48
ABR-207ENST00000570525 RAPGEF2Q9Y4G8 1499 aa24.26■■□□□ 1.47
ABR-207ENST00000570525 CEP162Q5TB80 1403 aa24.26■■□□□ 1.47
ABR-207ENST00000570525 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
ABR-207ENST00000570525 WDR97A6NE52 1622 aa24.18■■□□□ 1.46
ABR-207ENST00000570525 RAD54L2Q9Y4B4 1467 aa24.18■■□□□ 1.46
ABR-207ENST00000570525 MRC2Q9UBG0 1479 aa24.16■■□□□ 1.46
ABR-207ENST00000570525 UBTFP17480 764 aaKnown RBP24.16■■□□□ 1.46
ABR-207ENST00000570525 IGF1RP08069 1367 aa24.15■■□□□ 1.46
ABR-207ENST00000570525 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
ABR-207ENST00000570525 WDR62O43379 1518 aa24.05■■□□□ 1.44
ABR-207ENST00000570525 TARBP1Q13395 1621 aaKnown RBP24.04■■□□□ 1.44
ABR-207ENST00000570525 CLIP1P30622 1438 aa24.01■■□□□ 1.43
ABR-207ENST00000570525 CARMIL1Q5VZK9 1371 aa24.01■■□□□ 1.43
ABR-207ENST00000570525 CUL7Q14999 1698 aa23.99■■□□□ 1.43
ABR-207ENST00000570525 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.43
ABR-207ENST00000570525 ERCC6Q03468 1493 aa23.92■■□□□ 1.42
ABR-207ENST00000570525 GAPVD1Q14C86 1478 aa23.92■■□□□ 1.42
ABR-207ENST00000570525 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.41
ABR-207ENST00000570525 IFT140Q96RY7 1462 aa23.88■■□□□ 1.41
ABR-207ENST00000570525 TRIM26Q12899 539 aaPredicted RBP23.88■■□□□ 1.41
ABR-207ENST00000570525 VPS8Q8N3P4 1428 aa23.86■■□□□ 1.41
ABR-207ENST00000570525 PCGF6Q9BYE7 350 aa23.85■■□□□ 1.41
ABR-207ENST00000570525 ARAP1Q96P48 1450 aa23.83■■□□□ 1.41
ABR-207ENST00000570525 PBRM1Q86U86 1689 aa23.8■■□□□ 1.4
ABR-207ENST00000570525 ARHGAP35Q9NRY4 1499 aa23.77■■□□□ 1.4
ABR-207ENST00000570525 GRIN2BQ13224 1484 aa23.73■■□□□ 1.39
ABR-207ENST00000570525 ADAMTS12P58397 1594 aa23.73■■□□□ 1.39
ABR-207ENST00000570525 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.39
ABR-207ENST00000570525 ZNF608Q9ULD9 1512 aaPredicted RBP23.72■■□□□ 1.39
ABR-207ENST00000570525 CTTNBP2Q8WZ74 1663 aa23.72■■□□□ 1.39
ABR-207ENST00000570525 FHAD1B1AJZ9 1412 aa23.69■■□□□ 1.38
ABR-207ENST00000570525 EIF4G3O43432 1585 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms