RNA–Protein interactions for RNA: ENST00000570514.5

TRAP1-204, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2

Gene TRAP1, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-204ENST00000570514 NISCHQ9Y2I1 1504 aa22.59■■□□□ 1.21
TRAP1-204ENST00000570514 CCDC180Q9P1Z9 1646 aa19.92■□□□□ 0.78
TRAP1-204ENST00000570514 ZCCHC6Q5VYS8 1495 aaKnown RBP18.94■□□□□ 0.62
TRAP1-204ENST00000570514 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
TRAP1-204ENST00000570514 ABCC9O60706 1549 aa18.77■□□□□ 0.6
TRAP1-204ENST00000570514 MYO15BQ96JP2 1530 aa18.77■□□□□ 0.6
TRAP1-204ENST00000570514 NACADO15069 1562 aa18.61■□□□□ 0.57
TRAP1-204ENST00000570514 DCAF8L2P0C7V8 631 aa18.51■□□□□ 0.55
TRAP1-204ENST00000570514 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
TRAP1-204ENST00000570514 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
TRAP1-204ENST00000570514 SHROOM4Q9ULL8 1493 aa17.97■□□□□ 0.47
TRAP1-204ENST00000570514 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
TRAP1-204ENST00000570514 BICRAQ9NZM4 1560 aa17.76■□□□□ 0.43
TRAP1-204ENST00000570514 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
TRAP1-204ENST00000570514 BAZ1AQ9NRL2 1556 aaPredicted RBP17.53■□□□□ 0.4
TRAP1-204ENST00000570514 CECR2Q9BXF3 1484 aa17.41■□□□□ 0.38
TRAP1-204ENST00000570514 SMARCA4P51532 1647 aa17.39■□□□□ 0.38
TRAP1-204ENST00000570514 RSF1Q96T23 1441 aaPredicted RBP17.38■□□□□ 0.37
TRAP1-204ENST00000570514 MROH2BQ7Z745 1585 aa17.33■□□□□ 0.37
TRAP1-204ENST00000570514 EIF4G1Q04637 1599 aaKnown RBP17.3■□□□□ 0.36
TRAP1-204ENST00000570514 PEG3Q9GZU2 1588 aa17.3■□□□□ 0.36
TRAP1-204ENST00000570514 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
TRAP1-204ENST00000570514 SUPT5HO00267 1087 aaKnown RBP17.25■□□□□ 0.35
TRAP1-204ENST00000570514 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
TRAP1-204ENST00000570514 WIZO95785 1651 aa17.14■□□□□ 0.33
TRAP1-204ENST00000570514 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
TRAP1-204ENST00000570514 TOP2AP11388 1531 aaKnown RBP17.12■□□□□ 0.33
TRAP1-204ENST00000570514 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
TRAP1-204ENST00000570514 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
TRAP1-204ENST00000570514 CC2D2AQ9P2K1 1620 aa17.06■□□□□ 0.32
TRAP1-204ENST00000570514 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
TRAP1-204ENST00000570514 CFTRP13569 1480 aa16.67■□□□□ 0.26
TRAP1-204ENST00000570514 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.26
TRAP1-204ENST00000570514 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
TRAP1-204ENST00000570514 LAMC3Q9Y6N6 1575 aa16.61■□□□□ 0.25
TRAP1-204ENST00000570514 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
TRAP1-204ENST00000570514 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
TRAP1-204ENST00000570514 CHIC1Q5VXU3 224 aa16.46■□□□□ 0.23
TRAP1-204ENST00000570514 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
TRAP1-204ENST00000570514 WRNQ14191 1432 aaPredicted RBP eCLIP16.41■□□□□ 0.22
TRAP1-204ENST00000570514 ABCC8Q09428 1581 aa16.4■□□□□ 0.22
TRAP1-204ENST00000570514 TRIM41Q8WV44 630 aa16.39■□□□□ 0.21
TRAP1-204ENST00000570514 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
TRAP1-204ENST00000570514 NESP48681 1621 aa16.37■□□□□ 0.21
TRAP1-204ENST00000570514 TOP2BQ02880 1626 aa16.33■□□□□ 0.2
TRAP1-204ENST00000570514 BIVM-ERCC5R4GMW8 1640 aa16.31■□□□□ 0.2
TRAP1-204ENST00000570514 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.2
TRAP1-204ENST00000570514 SYNJ1O43426 1573 aa16.26■□□□□ 0.19
TRAP1-204ENST00000570514 CUX1P39880 1505 aa16.24■□□□□ 0.19
TRAP1-204ENST00000570514 ERCC6Q03468 1493 aa16.24■□□□□ 0.19
TRAP1-204ENST00000570514 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
TRAP1-204ENST00000570514 EEA1Q15075 1411 aa16.23■□□□□ 0.19
TRAP1-204ENST00000570514 KIF21AQ7Z4S6 1674 aa16.23■□□□□ 0.19
TRAP1-204ENST00000570514 TOPBP1Q92547 1522 aa16.2■□□□□ 0.18
TRAP1-204ENST00000570514 WDR62O43379 1518 aa16.17■□□□□ 0.18
TRAP1-204ENST00000570514 URB2Q14146 1524 aaKnown RBP16.16■□□□□ 0.18
TRAP1-204ENST00000570514 FGD5Q6ZNL6 1462 aa16.13■□□□□ 0.17
TRAP1-204ENST00000570514 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
TRAP1-204ENST00000570514 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
TRAP1-204ENST00000570514 KIF27Q86VH2 1401 aa16.08■□□□□ 0.16
TRAP1-204ENST00000570514 SOGA1O94964 1423 aa16.07■□□□□ 0.16
TRAP1-204ENST00000570514 ABCA10Q8WWZ4 1543 aa16.07■□□□□ 0.16
TRAP1-204ENST00000570514 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
TRAP1-204ENST00000570514 IFT140Q96RY7 1462 aa16.04■□□□□ 0.16
TRAP1-204ENST00000570514 CUX2O14529 1486 aa15.98■□□□□ 0.15
TRAP1-204ENST00000570514 CSRNP3Q8WYN3 585 aa15.98■□□□□ 0.15
TRAP1-204ENST00000570514 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
TRAP1-204ENST00000570514 RAD54L2Q9Y4B4 1467 aa15.94■□□□□ 0.14
TRAP1-204ENST00000570514 ABCA5Q8WWZ7 1642 aa15.92■□□□□ 0.14
TRAP1-204ENST00000570514 ERICH3Q5RHP9 1530 aa15.92■□□□□ 0.14
TRAP1-204ENST00000570514 KIF21BO75037 1637 aa15.9■□□□□ 0.14
TRAP1-204ENST00000570514 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
TRAP1-204ENST00000570514 CUL7Q14999 1698 aa15.88■□□□□ 0.13
TRAP1-204ENST00000570514 RUSC2Q8N2Y8 1516 aa15.88■□□□□ 0.13
TRAP1-204ENST00000570514 PRXQ9BXM0 1461 aa15.87■□□□□ 0.13
TRAP1-204ENST00000570514 IGF1RP08069 1367 aa15.87■□□□□ 0.13
TRAP1-204ENST00000570514 GOLGA3Q08378 1498 aa15.86■□□□□ 0.13
TRAP1-204ENST00000570514 FAM9AQ8IZU1 332 aaPredicted RBP15.86■□□□□ 0.13
TRAP1-204ENST00000570514 GRIN2BQ13224 1484 aa15.85■□□□□ 0.13
TRAP1-204ENST00000570514 TDRD9Q8NDG6 1382 aaKnown RBP15.83■□□□□ 0.12
TRAP1-204ENST00000570514 CARMIL1Q5VZK9 1371 aa15.81■□□□□ 0.12
TRAP1-204ENST00000570514 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
TRAP1-204ENST00000570514 EIF4G3O43432 1585 aaKnown RBP15.79■□□□□ 0.12
TRAP1-204ENST00000570514 MAGI1Q96QZ7 1491 aaPredicted RBP15.79■□□□□ 0.12
TRAP1-204ENST00000570514 PBRM1Q86U86 1689 aa15.78■□□□□ 0.12
TRAP1-204ENST00000570514 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.12
TRAP1-204ENST00000570514 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
TRAP1-204ENST00000570514 AQRO60306 1485 aaKnown RBP eCLIP15.77■□□□□ 0.112e-8■■□□□ 13.4
TRAP1-204ENST00000570514 TNIKQ9UKE5 1360 aa15.76■□□□□ 0.11
TRAP1-204ENST00000570514 ADAMTS12P58397 1594 aa15.72■□□□□ 0.11
TRAP1-204ENST00000570514 UBTFP17480 764 aaKnown RBP15.7■□□□□ 0.1
TRAP1-204ENST00000570514 SYNJ2O15056 1496 aa15.68■□□□□ 0.1
TRAP1-204ENST00000570514 SNAPC4Q5SXM2 1469 aa15.68■□□□□ 0.1
TRAP1-204ENST00000570514 LOC105371045A0A1W2PR82 267 aa15.68■□□□□ 0.1
TRAP1-204ENST00000570514 GRIN2AQ12879 1464 aa15.62■□□□□ 0.09
TRAP1-204ENST00000570514 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
TRAP1-204ENST00000570514 CEP162Q5TB80 1403 aa15.6■□□□□ 0.09
TRAP1-204ENST00000570514 CTTNBP2Q8WZ74 1663 aa15.58■□□□□ 0.08
TRAP1-204ENST00000570514 KIAA0586Q9BVV6 1533 aa15.56■□□□□ 0.08
TRAP1-204ENST00000570514 EFCAB5A4FU69 1503 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms