RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
NPLOC4-204ENST00000570324 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
NPLOC4-204ENST00000570324 ABCC9O60706 1549 aa19.56■□□□□ 0.72
NPLOC4-204ENST00000570324 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
NPLOC4-204ENST00000570324 DCAF8L2P0C7V8 631 aa18.64■□□□□ 0.57
NPLOC4-204ENST00000570324 NACADO15069 1562 aa18.57■□□□□ 0.56
NPLOC4-204ENST00000570324 MYO15BQ96JP2 1530 aa18.3■□□□□ 0.52
NPLOC4-204ENST00000570324 PABPN1Q86U42 306 aaKnown RBP eCLIP18.26■□□□□ 0.51
NPLOC4-204ENST00000570324 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
NPLOC4-204ENST00000570324 ZCCHC6Q5VYS8 1495 aaKnown RBP18.2■□□□□ 0.5
NPLOC4-204ENST00000570324 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
NPLOC4-204ENST00000570324 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
NPLOC4-204ENST00000570324 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
NPLOC4-204ENST00000570324 SCRIBQ14160 1630 aa17.94■□□□□ 0.46
NPLOC4-204ENST00000570324 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
NPLOC4-204ENST00000570324 CC2D2AQ9P2K1 1620 aa17.65■□□□□ 0.42
NPLOC4-204ENST00000570324 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
NPLOC4-204ENST00000570324 CECR2Q9BXF3 1484 aa17.61■□□□□ 0.41
NPLOC4-204ENST00000570324 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
NPLOC4-204ENST00000570324 SMARCA4P51532 1647 aa17.1■□□□□ 0.33
NPLOC4-204ENST00000570324 SMARCA2P51531 1590 aa17.08■□□□□ 0.32
NPLOC4-204ENST00000570324 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
NPLOC4-204ENST00000570324 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
NPLOC4-204ENST00000570324 HMGXB3Q12766 1538 aa17■□□□□ 0.31
NPLOC4-204ENST00000570324 BAZ1BQ9UIG0 1483 aaKnown RBP16.97■□□□□ 0.31
NPLOC4-204ENST00000570324 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
NPLOC4-204ENST00000570324 MROH2BQ7Z745 1585 aa16.91■□□□□ 0.3
NPLOC4-204ENST00000570324 PEG3Q9GZU2 1588 aa16.9■□□□□ 0.3
NPLOC4-204ENST00000570324 NESP48681 1621 aa16.81■□□□□ 0.28
NPLOC4-204ENST00000570324 CUX2O14529 1486 aa16.8■□□□□ 0.28
NPLOC4-204ENST00000570324 WIZO95785 1651 aa16.74■□□□□ 0.27
NPLOC4-204ENST00000570324 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
NPLOC4-204ENST00000570324 PDS5BQ9NTI5 1447 aa16.67■□□□□ 0.26
NPLOC4-204ENST00000570324 DNAJC5Q9H3Z4 198 aa16.65■□□□□ 0.26
NPLOC4-204ENST00000570324 CADPSQ9ULU8 1353 aa16.63■□□□□ 0.25
NPLOC4-204ENST00000570324 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
NPLOC4-204ENST00000570324 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
NPLOC4-204ENST00000570324 THOC2Q8NI27 1593 aaKnown RBP16.59■□□□□ 0.25
NPLOC4-204ENST00000570324 TOP2AP11388 1531 aaKnown RBP16.54■□□□□ 0.24
NPLOC4-204ENST00000570324 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
NPLOC4-204ENST00000570324 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
NPLOC4-204ENST00000570324 CFTRP13569 1480 aa16.44■□□□□ 0.22
NPLOC4-204ENST00000570324 FANCD2Q9BXW9 1451 aa16.44■□□□□ 0.22
NPLOC4-204ENST00000570324 WDR62O43379 1518 aa16.41■□□□□ 0.22
NPLOC4-204ENST00000570324 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
NPLOC4-204ENST00000570324 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
NPLOC4-204ENST00000570324 URB2Q14146 1524 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-204ENST00000570324 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
NPLOC4-204ENST00000570324 TOPBP1Q92547 1522 aa16.13■□□□□ 0.17
NPLOC4-204ENST00000570324 IFT140Q96RY7 1462 aa16.12■□□□□ 0.17
NPLOC4-204ENST00000570324 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
NPLOC4-204ENST00000570324 SUPT5HO00267 1087 aaKnown RBP16.1■□□□□ 0.17
NPLOC4-204ENST00000570324 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
NPLOC4-204ENST00000570324 TRIM41Q8WV44 630 aa16.06■□□□□ 0.16
NPLOC4-204ENST00000570324 ZNF608Q9ULD9 1512 aaPredicted RBP16.04■□□□□ 0.16
NPLOC4-204ENST00000570324 EIF4G3O43432 1585 aaKnown RBP15.98■□□□□ 0.15
NPLOC4-204ENST00000570324 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
NPLOC4-204ENST00000570324 TARBP1Q13395 1621 aaKnown RBP15.95■□□□□ 0.14
NPLOC4-204ENST00000570324 AQRO60306 1485 aaKnown RBP eCLIP15.95■□□□□ 0.141e-11■■■■□ 23.6
NPLOC4-204ENST00000570324 SOGA1O94964 1423 aa15.94■□□□□ 0.14
NPLOC4-204ENST00000570324 RAD54L2Q9Y4B4 1467 aa15.92■□□□□ 0.14
NPLOC4-204ENST00000570324 FBLN2P98095 1184 aa15.92■□□□□ 0.14
NPLOC4-204ENST00000570324 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
NPLOC4-204ENST00000570324 TDRD9Q8NDG6 1382 aaKnown RBP15.89■□□□□ 0.13
NPLOC4-204ENST00000570324 CUX1P39880 1505 aa15.89■□□□□ 0.13
NPLOC4-204ENST00000570324 CHD1O14646 1710 aa15.85■□□□□ 0.13
NPLOC4-204ENST00000570324 WDR97A6NE52 1622 aa15.83■□□□□ 0.12
NPLOC4-204ENST00000570324 RIMBP3CA6NJZ7 1639 aa15.83■□□□□ 0.12
NPLOC4-204ENST00000570324 RIMBP3BA6NNM3 1639 aa15.83■□□□□ 0.12
NPLOC4-204ENST00000570324 RIMBP3Q9UFD9 1639 aa15.83■□□□□ 0.12
NPLOC4-204ENST00000570324 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
NPLOC4-204ENST00000570324 SNAPC4Q5SXM2 1469 aa15.79■□□□□ 0.12
NPLOC4-204ENST00000570324 ARHGEF11O15085 1522 aa15.78■□□□□ 0.12
NPLOC4-204ENST00000570324 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
NPLOC4-204ENST00000570324 MAGI1Q96QZ7 1491 aaPredicted RBP15.76■□□□□ 0.11
NPLOC4-204ENST00000570324 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
NPLOC4-204ENST00000570324 CYB5RLQ6IPT4 315 aa15.73■□□□□ 0.11
NPLOC4-204ENST00000570324 WRNQ14191 1432 aaPredicted RBP eCLIP15.72■□□□□ 0.11
NPLOC4-204ENST00000570324 PBRM1Q86U86 1689 aa15.72■□□□□ 0.11
NPLOC4-204ENST00000570324 ABCA10Q8WWZ4 1543 aa15.71■□□□□ 0.11
NPLOC4-204ENST00000570324 SYNJ2O15056 1496 aa15.71■□□□□ 0.1
NPLOC4-204ENST00000570324 SYNJ1O43426 1573 aa15.7■□□□□ 0.1
NPLOC4-204ENST00000570324 TOP2BQ02880 1626 aa15.68■□□□□ 0.1
NPLOC4-204ENST00000570324 BIVM-ERCC5R4GMW8 1640 aa15.68■□□□□ 0.1
NPLOC4-204ENST00000570324 ABCA5Q8WWZ7 1642 aa15.66■□□□□ 0.1
NPLOC4-204ENST00000570324 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
NPLOC4-204ENST00000570324 ARAP1Q96P48 1450 aa15.62■□□□□ 0.09
NPLOC4-204ENST00000570324 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
NPLOC4-204ENST00000570324 GRIN2AQ12879 1464 aa15.56■□□□□ 0.08
NPLOC4-204ENST00000570324 ADAMTS12P58397 1594 aa15.54■□□□□ 0.08
NPLOC4-204ENST00000570324 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
NPLOC4-204ENST00000570324 ERICH3Q5RHP9 1530 aa15.53■□□□□ 0.08
NPLOC4-204ENST00000570324 NUP160Q12769 1436 aa15.48■□□□□ 0.07
NPLOC4-204ENST00000570324 CEP170Q5SW79 1584 aa15.48■□□□□ 0.07
NPLOC4-204ENST00000570324 KIF27Q86VH2 1401 aa15.43■□□□□ 0.06
NPLOC4-204ENST00000570324 ERCC6L2Q5T890 1561 aa15.4■□□□□ 0.06
NPLOC4-204ENST00000570324 SHROOM2Q13796 1616 aa15.39■□□□□ 0.05
NPLOC4-204ENST00000570324 JPH4Q96JJ6 628 aa15.38■□□□□ 0.05
NPLOC4-204ENST00000570324 PRG4Q92954 1404 aaPredicted RBP15.37■□□□□ 0.05
NPLOC4-204ENST00000570324 IGF1RP08069 1367 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms